Storing efficiently bioinformatics workflows

Michel Kinsy; Zoé Lacroix

doi:10.1109/BIBE.2007.4375741

Storing efficiently bioinformatics workflows

Michel Kinsy, Zoé Lacroix

Engineering, Ira A. Fulton Schools of (IAFSE)

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

2 Scopus citations

Abstract

We propose an efficient storage strategy to record bioinformatics workflows. Our approach presents scientists with a flexible design model that distinguishes the scientific aim as a design protocol expressed against an ontology from the implementations(s), scientific workflows composed of bioirnformatics services, and their execution. The storage strategy presented in this paper allows efficient access and constitutes the framework for reasoning on scientific protocols and experimental data.

Original language	English (US)
Title of host publication	Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, BIBE
Pages	1328-1332
Number of pages	5
DOIs	https://doi.org/10.1109/BIBE.2007.4375741
State	Published - 2007
Event	7th IEEE International Conference on Bioinformatics and Bioengineering, BIBE - Boston, MA, United States Duration: Jan 14 2007 → Jan 17 2007

Publication series

Name	Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, BIBE

Conference

Conference	7th IEEE International Conference on Bioinformatics and Bioengineering, BIBE
Country/Territory	United States
City	Boston, MA
Period	1/14/07 → 1/17/07

ASJC Scopus subject areas

Biotechnology
Genetics
Bioengineering

Access to Document

10.1109/BIBE.2007.4375741

Cite this

Storing efficiently bioinformatics workflows. / Kinsy, Michel; Lacroix, Zoé.
Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, BIBE. 2007. p. 1328-1332 4375741 (Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, BIBE).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Kinsy, M & Lacroix, Z 2007, Storing efficiently bioinformatics workflows. in Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, BIBE., 4375741, Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, BIBE, pp. 1328-1332, 7th IEEE International Conference on Bioinformatics and Bioengineering, BIBE, Boston, MA, United States, 1/14/07. https://doi.org/10.1109/BIBE.2007.4375741

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M3 - Conference contribution

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T3 - Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, BIBE

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Y2 - 14 January 2007 through 17 January 2007

ER -

Storing efficiently bioinformatics workflows

Abstract

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ASJC Scopus subject areas

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