TY - JOUR
T1 - Benthic bacterial diversity from freshwater tufas of the Iberian Range (Spain)
AU - Beraldi-Campesi, Hugo
AU - Arenas-Abad, Concepción
AU - Garcia-Pichel, Ferran
AU - Arellano-Aguilar, Omar
AU - Auqué, Luis
AU - Vázquez-Urbez, Marta
AU - Sancho, Carlos
AU - Osácar, Cinta
AU - Ruiz-Velasco, Silvia
PY - 2012/5
Y1 - 2012/5
N2 - Aiming to characterize the bacterial diversity of modern tufa systems of the Iberian Range (Spain), we surveyed the 16S rRNA gene sequence diversity from 24 sites within three rivers (Añamaza, Mesa and Piedra). These tufas record substantial calcareous growth under different physicochemical conditions and are part of an important, regional landscape-building system. The bacterial community structure and composition, richness and diversity were quantified from denaturing gradient gel electrophoresis fingerprints. Retrieved DNA sequences could be assigned to 10 bacterial phyla and included a variety of phototrophic and heterotrophic groups. Cyanobacteria, mainly filamentous taxa, constituted 43% of all the retrieved sequences, followed by Firmicutes (11%), Gammaproteobacteria (10%), Alphaproteobacteria (7%), Acidobacteria (6%), Bacteroidetes (5%), Betaproteobacteria (4%), Planctomycetes (4%), Actinobacteria (3%) and Deltaproteobacteria (2%). Diatom and Xanthophyceae chloroplast sequences were also detected. Physicochemical variables measured at each site were modelled with multivariate statistics. Principal component analyses yielded the highest variance for salinity-related variables (conductivity; Na +, Cl - and SO4 2- concentrations), which correlated negatively and significantly with diversity indices. However, the highest variance explained by individual principal components was relatively low (< 34%). Overall, we show that these young fluvial tufas are inhabited by a large variety of bacteria in diverse and widespread communities.
AB - Aiming to characterize the bacterial diversity of modern tufa systems of the Iberian Range (Spain), we surveyed the 16S rRNA gene sequence diversity from 24 sites within three rivers (Añamaza, Mesa and Piedra). These tufas record substantial calcareous growth under different physicochemical conditions and are part of an important, regional landscape-building system. The bacterial community structure and composition, richness and diversity were quantified from denaturing gradient gel electrophoresis fingerprints. Retrieved DNA sequences could be assigned to 10 bacterial phyla and included a variety of phototrophic and heterotrophic groups. Cyanobacteria, mainly filamentous taxa, constituted 43% of all the retrieved sequences, followed by Firmicutes (11%), Gammaproteobacteria (10%), Alphaproteobacteria (7%), Acidobacteria (6%), Bacteroidetes (5%), Betaproteobacteria (4%), Planctomycetes (4%), Actinobacteria (3%) and Deltaproteobacteria (2%). Diatom and Xanthophyceae chloroplast sequences were also detected. Physicochemical variables measured at each site were modelled with multivariate statistics. Principal component analyses yielded the highest variance for salinity-related variables (conductivity; Na +, Cl - and SO4 2- concentrations), which correlated negatively and significantly with diversity indices. However, the highest variance explained by individual principal components was relatively low (< 34%). Overall, we show that these young fluvial tufas are inhabited by a large variety of bacteria in diverse and widespread communities.
KW - Bacterial diversity
KW - Freshwater
KW - Tufa
UR - http://www.scopus.com/inward/record.url?scp=84859573735&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=84859573735&partnerID=8YFLogxK
U2 - 10.1111/j.1574-6941.2012.01303.x
DO - 10.1111/j.1574-6941.2012.01303.x
M3 - Article
C2 - 22242776
AN - SCOPUS:84859573735
SN - 0168-6496
VL - 80
SP - 363
EP - 379
JO - FEMS Microbiology Ecology
JF - FEMS Microbiology Ecology
IS - 2
ER -