Susanne Pfeifer

Asst Professor

  • 721 Citations
  • 11 h-Index
20092024

Research output per year

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Research Output

  • 721 Citations
  • 11 h-Index
  • 16 Article
  • 5 Review article
2019

Linking a mutation to survival in wild mice

Barrett, R. D. H., Laurent, S., Mallarino, R., Pfeifer, S., Xu, C. C. Y., Foll, M., Wakamatsu, K., Duke-Cohan, J. S., Jensen, J. & Hoekstra, H. E., Feb 1 2019, In : Science. 363, 6426, p. 499-504 6 p.

Research output: Contribution to journalArticle

17 Scopus citations
Open Access

The population genetics of crypsis in vertebrates: recent insights from mice, hares, and lizards

Harris, R. B., Irwin, K., Jones, M. R., Laurent, S., Barrett, R. D. H., Nachman, M. W., Good, J. M., Linnen, C. R., Jensen, J. & Pfeifer, S., Jan 1 2019, (Accepted/In press) In : Heredity.

Research output: Contribution to journalReview article

Open Access
1 Scopus citations
2018

A genetic reconstruction of the invasion of the calanoid copepod Pseudodiaptomus inopinus across the North American Pacific Coast

Dexter, E., Bollens, S. M., Cordell, J., Soh, H. Y., Rollwagen-Bollens, G., Pfeifer, S., Goudet, J. & Vuilleumier, S., Jun 1 2018, In : Biological Invasions. 20, 6, p. 1577-1595 19 p.

Research output: Contribution to journalArticle

4 Scopus citations

On the demographic and selective forces shaping patterns of human cytomegalovirus variation within hosts

Sackman, A. M., Pfeifer, S., Kowalik, T. F. & Jensen, J., Mar 2018, In : Pathogens. 7, 1, 16.

Research output: Contribution to journalReview article

7 Scopus citations

The demographic history of african drosophila melanogaster

Kapopoulou, A., Pfeifer, S., Jensen, J. & Laurent, S., Jan 1 2018, In : Genome Biology and Evolution. 10, 9, p. 2338-2342 5 p.

Research output: Contribution to journalReview article

4 Scopus citations

The evolutionary history of Nebraska deer mice: Local adaptation in the face of strong gene flow

Pfeifer, S., Laurent, S., Sousa, V. C., Linnen, C. R., Foll, M., Excoffier, L., Hoekstra, H. E. & Jensen, J., Apr 1 2018, In : Molecular Biology and Evolution. 35, 4, p. 792-806 15 p.

Research output: Contribution to journalArticle

17 Scopus citations
2017

Characterizing human cytomegalovirus reinfection in congenitally infected infants: An evolutionary perspective

Pokalyuk, C., Renzette, N., Irwin, K. K., Pfeifer, S., Gibson, L., Britt, W. J., Yamamoto, A. Y., Mussi-Pinhata, M. M., Kowalik, T. F. & Jensen, J., 2017, (Accepted/In press) In : Molecular Ecology.

Research output: Contribution to journalArticle

15 Scopus citations

Direct estimate of the spontaneous germ line mutation rate in African green monkeys

Pfeifer, S., Dec 1 2017, In : Evolution. 71, 12, p. 2858-2870 13 p.

Research output: Contribution to journalArticle

4 Scopus citations

From next-generation resequencing reads to a high-quality variant data set

Pfeifer, S., Feb 1 2017, In : Heredity. 118, 2, p. 111-124 14 p.

Research output: Contribution to journalReview article

16 Scopus citations

Loci associated with skin pigmentation identified in African populations

NISC Comparative Sequencing Program, Nov 17 2017, In : Science. 358, 6365, eaan8433.

Research output: Contribution to journalArticle

77 Scopus citations

On the analysis of intrahost and interhost viral populations: Human cytomegalovirus as a case study of pitfalls and expectations

Renzette, N., Pfeifer, S., Matuszewski, S., Kowalik, T. F. & Jensen, J., 2017, In : Journal of Virology. 91, 5, e01976-16.

Research output: Contribution to journalArticle

10 Scopus citations

The Demographic and Adaptive History of the African Green Monkey

Pfeifer, S., May 1 2017, In : Molecular Biology and Evolution. 34, 5, p. 1055-1065 11 p.

Research output: Contribution to journalArticle

6 Scopus citations

The ultimate and proximate mechanisms driving the evolution of long tails in forest deer mice

Kingsley, E. P., Kozak, K. M., Pfeifer, S., Yang, D. S. & Hoekstra, H. E., Feb 1 2017, In : Evolution. 71, 2, p. 261-273 13 p.

Research output: Contribution to journalArticle

5 Scopus citations
2016

Inferring the age of a fixed beneficial allele

Ormond, L., Foll, M., Ewing, G. B., Pfeifer, S. & Jensen, J., Jan 1 2016, In : Molecular Ecology. 25, 1, p. 157-169 13 p.

Research output: Contribution to journalArticle

11 Scopus citations

The impact of linked selection in chimpanzees: A comparative study

Pfeifer, S. & Jensen, J., 2016, In : Genome Biology and Evolution. 8, 10, p. 3202-3208 7 p.

Research output: Contribution to journalArticle

4 Scopus citations

The population genomics of rapid adaptation: Disentangling signatures of selection and demography in white sands lizards

Laurent, S., Pfeifer, S., Settles, M. L., Hunter, S. S., Hardwick, K. M., Ormond, L., Sousa, V. C., Jensen, J. & Rosenblum, E. B., Jan 1 2016, In : Molecular Ecology. 25, 1, p. 306-323 18 p.

Research output: Contribution to journalArticle

25 Scopus citations
2013

Contributions of intrinsic mutation rate and selfish selection to levels of de novo HRAS mutations in the paternal germline

Giannoulatou, E., McVean, G., Taylor, I. B., McGowan, S. J., Maher, G. J., Iqbal, Z., Pfeifer, S. P., Turner, I., Burkitt Wright, E. M. M., Shorto, J., Itani, A., Turner, K., Gregory, L., Buck, D., Rajpert-De Meyts, E., Looijenga, L. H. J., Kerr, B., Wilkie, A. O. M. & Goriely, A., Dec 10 2013, In : Proceedings of the National Academy of Sciences of the United States of America. 110, 50, p. 20152-20157 6 p.

Research output: Contribution to journalArticle

38 Scopus citations

Multiple instances of ancient balancing selection shared between humans and chimpanzees

Leffler, E. M., Gao, Z., Pfeifer, S., Ségurel, L., Auton, A., Venn, O., Bowden, R., Bontrop, R., Wall, J. D., Sella, G., Donnelly, P., McVean, G. & Przeworski, M., Mar 29 2013, In : Science. 340, 6127, p. 1578-1582 5 p.

Research output: Contribution to journalArticle

149 Scopus citations
2012

A fine-scale chimpanzee genetic map from population sequencing

Auton, A., Fledel-Alon, A., Pfeifer, S., Venn, O., Ségurel, L., Street, T., Leffler, E. M., Bowden, R., Aneas, I., Broxholme, J., Humburg, P., Iqbal, Z., Lunter, G., Maller, J., Hernandez, R. D., Melton, C., Venkat, A., Nobrega, M. A., Bontrop, R., Myers, S. & 3 others, Donnelly, P., Przeworski, M. & McVean, G., Apr 13 2012, In : Science. 336, 6078, p. 193-198 6 p.

Research output: Contribution to journalArticle

170 Scopus citations
2009

Activating mutations in FGFR3 and HRAS reveal a shared genetic origin for congenital disorders and testicular tumors

Goriely, A., Hansen, R. M. S., Taylor, I. B., Olesen, I. A., Jacobsen, G. K., McGowan, S. J., Pfeifer, S. P., McVean, G. A. T., Meyts, E. R. D. & Wilkie, A. O. M., Nov 1 2009, In : Nature Genetics. 41, 11, p. 1247-1252 6 p.

Research output: Contribution to journalArticle

141 Scopus citations