Reed Cartwright

Assistant Professor

  • 1054 Citations
  • 13 h-Index
20042018
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Fingerprint Fingerprint is based on mining the text of the experts' scientific documents to create an index of weighted terms, which defines the key subjects of each individual researcher.

Mutation Rate Medicine & Life Sciences
Genome Medicine & Life Sciences
Mutation Medicine & Life Sciences
Sequencing Mathematics
Inbreeding Medicine & Life Sciences
Population Medicine & Life Sciences
mutation Agriculture & Biology
Alignment Mathematics

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Research Output 2004 2018

  • 1054 Citations
  • 13 h-Index
  • 29 Article
  • 1 Patent
3 Citations (Scopus)

The role of gene flow in rapid and repeated evolution of cave-related traits in Mexican tetra, Astyanax mexicanus

Herman, A., Brandvain, Y., Weagley, J., Jeffery, W. R., Keene, A. C., Kono, T. J. Y., Bilandžija, H., Borowsky, R., Espinasa, L., O'Quin, K., Ornelas-García, C. P., Yoshizawa, M., Carlson, B., Maldonado, E., Gross, J. B., Cartwright, R., Rohner, N., Warren, W. C. & McGaugh, S. E., Jan 1 2018, (Accepted/In press) In : Molecular Ecology.

Research output: Contribution to journalArticle

Gene Flow
caves
gene flow
cave
Population
3 Citations (Scopus)

Estimating error models for whole genome sequencing using mixtures of Dirichlet-multinomial distributions

Wu, S. H., Schwartz, R. S., Winter, D. J., Conrad, D. F. & Cartwright, R., Aug 1 2017, In : Bioinformatics. 33, 15, p. 2322-2329 8 p.

Research output: Contribution to journalArticle

Dirichlet Distribution
Multinomial Distribution
Error Model
Sequencing
Genome
3 Citations (Scopus)

Experimental evolution reveals an effective avenue to release catabolite repression via mutations in XylR

Sievert, C., Nieves, L. M., Panyon, L. A., Loeffler, T., Morris, C., Cartwright, R., Wang, X. & Demain, A. L., Jul 11 2017, In : Proceedings of the National Academy of Sciences of the United States of America. 114, 28, p. 7349-7354 6 p.

Research output: Contribution to journalArticle

Catabolite Repression
Xylose
Mutation
Escherichia coli
Biomass
3 Citations (Scopus)

Inferring rates and length-distributions of indels using approximate Bayesian computation

Karin, E. L., Shkedy, D., Ashkenazy, H., Cartwright, R. & Pupko, T., 2017, In : Genome Biology and Evolution. 9, 5, p. 1280-1294 15 p.

Research output: Contribution to journalArticle

statistics
Likelihood Functions
Bayes Theorem
substitution
Statistical Models
2 Citations (Scopus)

SpartaABC: A web server to simulate sequences with indel parameters inferred using an approximate Bayesian computation algorithm

Ashkenazy, H., Levy Karin, E., Mertens, Z., Cartwright, R. & Pupko, T., Jul 3 2017, In : Nucleic Acids Research. 45, W1, p. W453-W457

Research output: Contribution to journalArticle

Sequence Deletion
Insertional Mutagenesis
Biological Phenomena
Sequence Alignment
Proteins

Projects 2013 2018

Mutation
Software
INDEL Mutation
Chromosome Segregation
Inborn Genetic Diseases
Tetrahymena thermophila
Mutation
Genome
Germ-Line Mutation
Mutation Rate