Research Output per year
Research Output 1980 2019
- 1 - 50 out of 140 results
- Publication Year, Title (descending)
Bound manganese oxides capable of reducing the bacteriochlorophyll dimer of modified reaction centers from Rhodobacter sphaeroides
Espiritu, E., Chamberlain, K. D., Williams, J. A. C. & Allen, J. P., Jan 1 2019, (Accepted/In press) In : Photosynthesis research.Research output: Contribution to journal › Article
Influence of Hydrogen Bonds on the Electron-Phonon Coupling Strength/Marker Mode Structure and Charge Separation Rates in Reaction Centers from Rhodobacter sphaeroides
Khmelnitskiy, A., Williams, J. A. C., Allen, J. P. & Jankowiak, R., Oct 17 2019, In : Journal of Physical Chemistry B. 123, 41, p. 8717-8726 10 p.Research output: Contribution to journal › Article
Influence of the Electrochemical Properties of the Bacteriochlorophyll Dimer on Triplet Energy-Transfer Dynamics in Bacterial Reaction Centers
Mandal, S., Espiritu, E., Akram, N., Lin, S., Williams, J., Allen, J. & Woodbury, N., Nov 8 2018, In : Journal of Physical Chemistry B. 122, 44, p. 10097-10107 11 p.Research output: Contribution to journal › Article
Remembering George Feher (1924–2017)
Okamura, M. Y., Lubitz, W. & Allen, J., May 25 2018, (Accepted/In press) In : Photosynthesis Research. p. 1-15 15 p.Research output: Contribution to journal › Article
Binding and Energetics of Electron Transfer between an Artificial Four-Helix Mn-Protein and Reaction Centers from Rhodobacter sphaeroides
Espiritu, E., Olson, T. L., Williams, J. & Allen, J., Dec 12 2017, In : Biochemistry. 56, 49, p. 6460-6469 10 p.Research output: Contribution to journal › Article
Biochemical and spectroscopic characterization of dinuclear Mn-sites in artificial four-helix bundle proteins
Olson, T. L., Espiritu, E., Edwardraja, S., Canarie, E., Flores, M., Williams, J., Ghirlanda, G. & Allen, J., Dec 1 2017, In : Biochimica et Biophysica Acta - Bioenergetics. 1858, 12, p. 945-954 10 p.Research output: Contribution to journal › Article
Identification of the Ferredoxin-Binding Site of a Ferredoxin-Dependent Cyanobacterial Nitrate Reductase
Srivastava, A. P., Hardy, E. P., Allen, J., Vaccaro, B. J., Johnson, M. K. & Knaff, D. B., Oct 17 2017, In : Biochemistry. 56, 41, p. 5582-5592 11 p.Research output: Contribution to journal › Article
Mechanism of Triplet Energy Transfer in Photosynthetic Bacterial Reaction Centers
Mandal, S., Carey, A. M., Locsin, J., Gao, B. R., Williams, J., Allen, J., Lin, S. & Woodbury, N., Jul 13 2017, In : Journal of Physical Chemistry B. 121, 27, p. 6499-6510 12 p.Research output: Contribution to journal › Article
Design of dinuclear manganese cofactors for bacterial reaction centers
Olson, T. L., Espiritu, E., Edwardraja, S., Simmons, C. R., Williams, J., Ghirlanda, G. & Allen, J., May 1 2016, In : Biochimica et Biophysica Acta - Bioenergetics. 1857, 5, p. 539-547 9 p.Research output: Contribution to journal › Article
Copper Environment in Artificial Metalloproteins Probed by Electron Paramagnetic Resonance Spectroscopy
Flores, M., Olson, T. L., Wang, D., Edwardraja, S., Shinde, S., Williams, J., Ghirlanda, G. & Allen, J., Oct 29 2015, In : Journal of Physical Chemistry B. 119, 43, p. 13825-13833 9 p.Research output: Contribution to journal › Article
Identification of Amino Acids at the Catalytic Site of a Ferredoxin-Dependent Cyanobacterial Nitrate Reductase
Srivastava, A. P., Allen, J., Vaccaro, B. J., Hirasawa, M., Alkul, S., Johnson, M. K. & Knaff, D. B., Sep 15 2015, In : Biochemistry. 54, 36, p. 5557-5568 12 p.Research output: Contribution to journal › Article
The SMN structure reveals its crucial role in snRNP assembly
Seng, C. O., Magee, C., Young, P. J., Lorson, C. L. & Allen, J., Apr 15 2015, In : Human Molecular Genetics. 24, 8, p. 2138-2146 9 p., ddu734.Research output: Contribution to journal › Article
Electronic structure of the Mn-cofactor of modified bacterial reaction centers measured by electron paramagnetic resonance and electron spin echo envelope modulation spectroscopies
Tufts, A. A., Flores, M., Olson, T. L., Williams, J. & Allen, J., 2014, In : Photosynthesis Research. 120, 1-2, p. 207-220 14 p.Research output: Contribution to journal › Article
Interface for light-driven electron transfer by photosynthetic complexes across block copolymer membranes
Kuang, L., Olson, T. L., Lin, S., Flores, M., Jiang, Y., Zheng, W., Williams, J., Allen, J. & Liang, H., Mar 6 2014, In : Journal of Physical Chemistry Letters. 5, 5, p. 787-791 5 p.Research output: Contribution to journal › Article
Purification and biophysical characterization of the CapA membrane protein FTT0807 from francisella tularensis
Martin-Garcia, J. M., Hansen, D., Zook, J., Loskutov, A. V., Robida, M. D., Craciunescu, F. M., Sykes, K. F., Wachter, R., Fromme, P. & Allen, J., Apr 1 2014, In : Biochemistry. 53, 12, p. 1958-1970 13 p.Research output: Contribution to journal › Article
The three-dimensional structures of bacterial reaction centers
Olson, T. L., Williams, J. & Allen, J., 2014, In : Photosynthesis Research. 120, 1-2, p. 87-98 12 p.Research output: Contribution to journal › Article
Water oxidation by a nickel-glycine catalyst
Wang, D., Ghirlanda, G. & Allen, J., Jul 23 2014, In : Journal of the American Chemical Society. 136, 29, p. 10198-10201 4 p.Research output: Contribution to journal › Article
Influence of protein interactions on oxidation/reduction midpoint potentials of cofactors in natural and de novo metalloproteins
Olson, T. L., Williams, J. & Allen, J., 2013, In : Biochimica et Biophysica Acta - Bioenergetics. 1827, 8-9, p. 914-922 9 p.Research output: Contribution to journal › Article
Roles of four conserved basic amino acids in a ferredoxin-dependent cyanobacterial nitrate reductase
Srivastava, A. P., Hirasawa, M., Bhalla, M., Chung, J. S., Allen, J., Johnson, M. K., Tripathy, J. N., Rubio, L. M., Vaccaro, B., Subramanian, S., Flores, E., Zabet-Moghaddam, M., Stitle, K. & Knaff, D. B., Jun 25 2013, In : Biochemistry. 52, 25, p. 4343-4353 11 p.Research output: Contribution to journal › Article
Light-driven oxygen production from superoxide by Mn-binding bacterial reaction centers
Allen, J., Olson, T. L., Oyala, P., Lee, W. J., Tufts, A. A. & Williams, J., Feb 14 2012, In : Proceedings of the National Academy of Sciences of the United States of America. 109, 7, p. 2314-2318 5 p.Research output: Contribution to journal › Article
PH-dependent structural conformations of B-phycoerythrin from Porphyridium cruentum
Camara-Artigas, A., Bacarizo, J., Andujar-Sanchez, M., Ortiz-Salmeron, E., Mesa-Valle, C., Cuadri, C., Martin-Garcia, J. M., Martinez-Rodriguez, S., Mazzuca-Sobczuk, T., Ibañez, M. J. & Allen, J., Oct 2012, In : FEBS Journal. 279, 19, p. 3680-3691 12 p.Research output: Contribution to journal › Article
Reinterpretation of the electron density at the site of the eighth bacteriochlorophyll in the FMO protein from Pelodictyon phaeum
Tronrud, D. E. & Allen, J., Apr 2012, In : Photosynthesis Research. 112, 1, p. 71-74 4 p.Research output: Contribution to journal › Article
Carotenoid excited-state properties in photosynthetic purple bacterial reaction centers: Effects of the protein environment
Pan, J., Lin, S., Allen, J., Williams, J., Frank, H. A. & Woodbury, N., Jun 2 2011, In : Journal of Physical Chemistry B. 115, 21, p. 7058-7068 11 p.Research output: Contribution to journal › Article
Energetics for Oxidation of a Bound Manganese Cofactor in Modified Bacterial Reaction Centers
Kálmán, L., Williams, J. & Allen, J., Apr 26 2011, In : Biochemistry. 50, 16, p. 3310-3320 11 p.Research output: Contribution to journal › Article
Light-induced conformational changes in photosynthetic reaction centers: Dielectric relaxation in the vicinity of the dimer
Deshmukh, S. S., Williams, J., Allen, J. & Kálmán, L., Jan 25 2011, In : Biochemistry. 50, 3, p. 340-348 9 p.Research output: Contribution to journal › Article
Light-induced conformational changes in photosynthetic reaction centers: Impact of detergents and lipids on the electronic structure of the primary electron donor
Deshmukh, S. S., Akhavein, H., Williams, J., Allen, J. & Kálmán, L., Jun 14 2011, In : Biochemistry. 50, 23, p. 5249-5262 14 p.Research output: Contribution to journal › Article
Light-Induced Conformational Changes in Photosynthetic Reaction Centers: Redox-Regulated Proton Pathway near the Dimer
Deshmukh, S. S., Williams, J., Allen, J. & Kálmán, L., Apr 26 2011, In : Biochemistry. 50, 16, p. 3321-3331 11 p.Research output: Contribution to journal › Article
The evolutionary pathway from anoxygenic to oxygenic photosynthesis examined by comparison of the properties of photosystem II and bacterial reaction centers
Allen, J. & Williams, J., Jan 2011, In : Photosynthesis Research. 107, 1, p. 59-69 11 p.Research output: Contribution to journal › Article
The three-dimensional structure of the FMO protein from Pelodictyon phaeum and the implications for energy transfer
Larson, C. R., Seng, C. O., Lauman, L., Matthies, H. J., Wen, J., Blankenship, R. E. & Allen, J., Feb 2011, In : Photosynthesis Research. 107, 2, p. 139-150 12 p.Research output: Contribution to journal › Article
Thin film voltammetry of wild type and mutant reaction center proteins from photosynthetic bacteria
Zhang, Y., Lafountain, A. M., Magdaong, N., Fuciman, M., Allen, J., Frank, H. A. & Rusling, J. F., Mar 31 2011, In : Journal of Physical Chemistry B. 115, 12, p. 3226-3232 7 p.Research output: Contribution to journal › Article
Understanding the polymorphic behaviour of a mutant of the -spectrin SH3 domain by means of two 1.1 Å resolution structures
Cámara-Artigas, A., Gavira, J. A., Casares, S., Garcia-Ruiz, J. M., Conejero-Lara, F., Allen, J. & Martinez, J. C., Mar 2011, In : Acta Crystallographica Section D: Biological Crystallography. 67, 3, p. 189-196 8 p.Research output: Contribution to journal › Article
Electronic structure of Fe3+ at a metal-binding site introduced in modified bacterial reaction centers
Kálmán, L., Flores, M., Williams, J. & Allen, J., 2010, In : Applied Magnetic Resonance. 37, 1, p. 27-37 11 p.Research output: Contribution to journal › Article
Enzymatic properties of the ferredoxin-dependent nitrite reductase from chlamydomonas reinhardtii. Evidence for hydroxylamine as a late intermediate in ammonia production
Hirasawa, M., Tripathy, J. N., Sommer, F., Somasundaram, R., Chung, J. S., Nestander, M., Kruthiventi, M., Zabet-Moghaddam, M., Johnson, M. K., Merchant, S. S., Allen, J. & Knaff, D. B., Jan 2010, In : Photosynthesis Research. 103, 2, p. 67-77 11 p.Research output: Contribution to journal › Article
The influence of hydrogen bonds on the electronic structure of light-harvesting complexes from photosynthetic bacteria
Uyeda, G., Williams, J., Roman, M., Mattioli, T. A. & Allen, J., Feb 16 2010, In : Biochemistry. 49, 6, p. 1146-1159 14 p.Research output: Contribution to journal › Article
Three-dimensional structures reveal multiple ADP/ATP binding modes for a synthetic class of artificial proteins
Simmons, C. R., Magee, C. L., Smith, D. A., Lauman, L., Chaput, J. C. & Allen, J., Oct 12 2010, In : Biochemistry. 49, 40, p. 8689-8699 11 p.Research output: Contribution to journal › Article
A synthetic protein selected for ligand binding affinity mediates ATP hydrolysis
Simmons, C. R., Stomel, J. M., McConnell, M. D., Smith, D. A., Watkins, J. L., Allen, J. & Chaput, J. C., Aug 21 2009, In : ACS Chemical Biology. 4, 8, p. 649-658 10 p.Research output: Contribution to journal › Article
Effect of anions on the binding and oxidation of divalent manganese and iron in modified bacterial reaction centers
Tang, K., Williams, J., Allen, J. & Kálmán, L., 2009, In : Biophysical Journal. 96, 8, p. 3295-3304 10 p.Research output: Contribution to journal › Article
Electron transfer in the Rhodobacter sphaeroides reaction center assembled with zinc bacteriochlorophyll
Lin, S., Jaschke, P. R., Wang, H., Paddock, M., Tufts, A., Allen, J., Rosell, F. I., Mauk, A. G., Woodbury, N. & Beatty, J. T., May 26 2009, In : Proceedings of the National Academy of Sciences of the United States of America. 106, 21, p. 8537-8542 6 p.Research output: Contribution to journal › Article
EPR, ENDOR, and Special TRIPLE measurements of P•+ in wild type and modified reaction centers from Rb. sphaeroides
Allen, J., Cordova, J. M., Jolley, C. C., Murray, T. A., Schneider, J. W., Woodbury, N., Williams, J., Niklas, J., Klihm, G., Reus, M. & Lubitz, W., Jan 2009, In : Photosynthesis Research. 99, 1, p. 1-10 10 p.Research output: Contribution to journal › Article
Structures of proteins and cofactors: X-ray crystallography
Allen, J., Seng, C. & Larson, C., Nov 2009, In : Photosynthesis Research. 102, 2, p. 231-240 10 p.Research output: Contribution to journal › Article
The interaction of spinach nitrite reductase with ferredoxin: A site-directed mutation study
Hirasawa, M., Tripathy, J. N., Somasundaram, R., Johnson, M. K., Bhalla, M., Allen, J. & Knaff, D. B., May 2009, In : Molecular Plant. 2, 3, p. 407-415 9 p.Research output: Contribution to journal › Article
Unusual temperature dependence of photosynthetic electron transfer due to protein dynamics
Wang, H., Lin, S., Katilius, E., Laser, C., Allen, J., Williams, J. & Woodbury, N., Jan 22 2009, In : Journal of Physical Chemistry B. 113, 3, p. 818-824 7 p.Research output: Contribution to journal › Article
Comparison of bacterial reaction centers and photosystem II
Kálmán, L., Williams, J. & Allen, J., Oct 2008, In : Photosynthesis Research. 98, 1-3, p. 643-655 13 p.Research output: Contribution to journal › Article
Changes in metal specificity due to iron ligand substitutions in reaction centers from Rhodobacter sphaeroides
Williams, J., Paddock, M. L., Way, Y. P. & Allen, J., 2007, In : Applied Magnetic Resonance. 31, 1-2, p. 45-58 14 p.Research output: Contribution to journal › Article
Protein dynamics control the kinetics of initial electron transfer in photosynthesis
Wang, H., Lin, S., Allen, J., Williams, J., Blankert, S., Laser, C. & Woodbury, N., May 4 2007, In : Science. 316, 5825, p. 747-750 4 p.Research output: Contribution to journal › Article
Reduction of the oxidized bacteriochlorophyll dimer in reaction centers by ferrocene is dependent upon the driving force
Kálmán, L., Haffa, A. L. M., Williams, J., Woodbury, N. & Allen, J., 2007, In : Journal of Porphyrins and Phthalocyanines. 11, 3-4, p. 205-211 7 p.Research output: Contribution to journal › Article
Structural insights into the evolution of a non-biological protein: Importance of surface residues in protein fold optimization
Smith, M. D., Rosenow, M. A., Wang, M., Allen, J., Szostak, J. W. & Chaput, J. C., May 23 2007, In : PLoS One. 2, 5, e467.Research output: Contribution to journal › Article
The role of tryptophan in the ferredoxin-dependent nitrite reductase of spinach
Tripathy, J. N., Hirasawa, M., Kim, S. K., Setterdahl, A. T., Allen, J. & Knaff, D. B., Oct 2007, In : Photosynthesis Research. 94, 1, p. 1-12 12 p.Research output: Contribution to journal › Article
Crystallization and structural analysis of GADPH from Spinacia oleracea in a new form
Cámara-Artigas, A., Hirasawa, M., Knaff, D. B., Wang, M. & Allen, J., Nov 2006, In : Acta Crystallographica Section F: Structural Biology and Crystallization Communications. 62, 11, p. 1087-1092 6 p.Research output: Contribution to journal › Article
Iron as a bound secondary electron donor in modified bacterial reaction centers
Kálmán, L., LoBrutto, R., Williams, J. & Allen, J., Nov 21 2006, In : Biochemistry. 45, 46, p. 13869-13874 6 p.Research output: Contribution to journal › Article