CLAS-NS: Bioenergy and Photosynthesis, Center for (C&BP)

Research Output 1979 2019

2019
8 Citations (Scopus)

A novel photocatalytic optical hollow-fiber with high photocatalytic activity for enhancement of 4-chlorophenol degradation

Zhong, N., Chen, M., Luo, Y., Wang, Z., Xin, X. & Rittmann, B., Jan 1 2019, In : Chemical Engineering Journal. 355, p. 731-739 9 p.

Research output: Contribution to journalArticle

chlorophenol
Optical fibers
Degradation
degradation
coating
Synechocystis
Biofilms
biofilm
nutrient content
Food
1 Citation (Scopus)

Bioavailable electron donors leached from leaves accelerate biodegradation of pyridine and quinoline

Lu, Q., Zhang, C., Wang, W., Yuan, B., Zhang, Y. & Rittmann, B., Mar 1 2019, In : Science of the Total Environment. 654, p. 473-479 7 p.

Research output: Contribution to journalArticle

Biodegradation
Pyridine
leachate
biodegradation
electron
1 Citation (Scopus)

Cities of the Southwest are testbeds for urban resilience

Hondula, D., Sabo, J., Quay, R., Chester, M., Georgescu, M., Grimm, N., Harlan, S., Middel, A., Porter, S., Redman, C., Rittmann, B., Ruddell, B. L. & White, D., Mar 1 2019, In : Frontiers in Ecology and the Environment. 17, 2, p. 79-80 2 p.

Research output: Contribution to journalArticle

city

Effects of light intensity on soluble microbial products produced by Synechocystis sp. PCC 6803 and associated heterotrophic communities

Cahill, B., Straka, L., Maldonado Ortiz, J., Krajmalnik-Brown, R. & Rittmann, B., Mar 1 2019, In : Algal Research. 38, 101409.

Research output: Contribution to journalArticle

Synechocystis sp. PCC 6803
Synechocystis
microbial communities
light intensity
algae

Electron-acceptor loadings affect chloroform dechlorination in a hydrogen-based membrane biofilm reactor

Lai, Y. J. S., Ontiveros-Valencia, A., Coskun, T., Zhou, C. & Rittmann, B., Jan 1 2019, In : Biotechnology and Bioengineering.

Research output: Contribution to journalArticle

Dechlorination
Biofilms
Chloroform
Chlorine compounds
Hydrogen
1 Citation (Scopus)

Energy recovery in the form of N 2 O by denitrifying bacteria

Yu, C., Qiao, S., Yang, Y., Jin, R., Zhou, J. & Rittmann, B., Sep 1 2019, In : Chemical Engineering Journal. 371, p. 500-506 7 p.

Research output: Contribution to journalArticle

Ethylenediaminetetraacetic acid
nitrous oxide
EDTA
Bacteria
Cytochromes c
Denitrification
Nitrates
calcium acetate
denitrification
Carbonates
3 Citations (Scopus)

Methane oxidation coupled to perchlorate reduction in a membrane biofilm batch reactor

Lv, P. L., Shi, L. D., Wang, Z., Rittmann, B. & Zhao, H. P., Jun 1 2019, In : Science of the Total Environment. 667, p. 9-15 7 p.

Research output: Contribution to journalArticle

perchlorate
Methane
Batch reactors
Biofilms
biofilm

Phosphate depletion controls lipid content and accumulation of heterotrophic bacteria during growth of Synechocystis sp. PCC 6803

Zhou, Y., Lai, Y. J. S., Eustance, E., Xia, S. & Rittmann, B., Jan 1 2019, In : Applied Microbiology and Biotechnology.

Research output: Contribution to journalArticle

Synechocystis
Cyanobacteria
Biomass
Phosphates
Bacteria
Cationic surfactants
Chain length
surfactant
Biomass
Agglomeration

Recent innovations in membrane-protein structural biology [version 1; referees: 3 approved]

Allen, J., Jan 1 2019, In : F1000Research. 8, 211.

Research output: Contribution to journalReview article

Open Access
Membrane Proteins
Innovation
Crystals
X-Rays
X rays

Repeat proteins as versatile scaffolds for arrays of redox-active FeS clusters

Mejias, S. H., Bahrami-Dizicheh, Z., Liutkus, M., Sommer, D. J., Astashkin, A., Kodis, G., Ghirlanda, G. & Cortajarena, A. L., Jan 1 2019, In : Chemical Communications. 55, 23, p. 3319-3322 4 p.

Research output: Contribution to journalArticle

Open Access
Scaffolds (biology)
Scaffolds
Charge transfer
Stabilization
Proteins

Role of hydrogen (H 2 ) mass transfer in microbiological H 2 -threshold studies

Karadagli, F., Marcus, A. & Rittmann, B., Jan 1 2019, In : Biodegradation.

Research output: Contribution to journalArticle

mass transfer
Hydrogen
Mass transfer
Gases
hydrogen

Selective Transmission of Phonons in Molecular Junctions with Nanoscopic Thermal Baths

Medrano Sandonas, L., Rodríguez Méndez, Á., Gutierrez, R., Ugalde, J. M., Mujica, V. & Cuniberti, G., Apr 18 2019, In : Journal of Physical Chemistry C. 123, 15, p. 9680-9687 8 p.

Research output: Contribution to journalArticle

Phonons
baths
phonons
molecular chains
Energy harvesting

The actin motor MYO-5 effect in the intracellular organization of Neurospora crassa

Ramírez-del Villar, A., Roberson, R., Callejas-Negrete, O. A. & Mouriño-Pérez, R. R., Apr 1 2019, In : Fungal Genetics and Biology. 125, p. 13-27 15 p.

Research output: Contribution to journalArticle

Neurospora crassa
Myosin Type V
Actins
Hyphae
Growth

The role of ultrasound-treated sludge for accelerating quinoline mono-oxygenation

Zhang, Y., Wang, Y., Lu, Q., Zhang, C., Yan, N., Zhang, Y. & Rittmann, B., Mar 1 2019, In : Journal of Environmental Management. 233, p. 561-566 6 p.

Research output: Contribution to journalArticle

Oxygenation
oxygenation
Biodegradation
Ultrasonics
sludge
1 Citation (Scopus)

Timing the evolutionary advent of cyanobacteria and the later great oxidation event using gene phylogenies of a sunscreen

Garcia-Pichel, F., Lombard, J., Soule, T., Dunaj, S., Wu, S. H. & Wojciechowski, M., May 1 2019, In : mBio. 10, 3, e00561-19.

Research output: Contribution to journalArticle

Open Access
Sunscreening Agents
Cyanobacteria
Phylogeny
Operon
Photosynthesis

Uptake of phosphate by Synechocystis sp. PCC 6803 in dark conditions: Removal driving force and modeling

Zhou, Y., Marcus, A., Straka, L., Eustance, E., Lai, Y. J. S., Xia, S. & Rittmann, B., Mar 1 2019, In : Chemosphere. p. 147-156 10 p.

Research output: Contribution to journalArticle

Synechocystis
Biomass
Phosphates
phosphate
Microalgae
2018
2 Citations (Scopus)

2D Enzyme Cascade Network with Efficient Substrate Channeling by Swinging Arms

Yang, Y. R., Fu, J., Wootten, S., Qi, X., Liu, M., Yan, H. & Liu, Y., Feb 2 2018, In : ChemBioChem. 19, 3, p. 212-216 5 p.

Research output: Contribution to journalArticle

Substrates
Enzymes
NAD
Atomic Force Microscopy
DNA
3 Citations (Scopus)

Accurate O2 delivery enabled benzene biodegradation through aerobic activation followed by denitrification-coupled mineralization

Liu, Z., Zhou, C., Ontiveros-Valencia, A., Luo, Y. H., Long, M., Xu, H. & Rittmann, B., Jan 1 2018, (Accepted/In press) In : Biotechnology and Bioengineering.

Research output: Contribution to journalArticle

Denitrification
Biodegradation
Benzene
Chemical activation
Respiration
127 Citations (Scopus)

A DNA nanorobot functions as a cancer therapeutic in response to a molecular trigger in vivo

Li, S., Jiang, Q., Liu, S., Zhang, Y., Tian, Y., Song, C., Wang, J., Zou, Y., Anderson, G. J., Han, J. Y., Chang, Y., Liu, Y., Zhang, C., Chen, L., Zhou, G., Nie, G., Yan, H., Ding, B. & Zhao, Y., Mar 1 2018, In : Nature Biotechnology. 36, 3, p. 258-264 7 p.

Research output: Contribution to journalArticle

Nanorobots
Tumors
DNA
Neoplasms
Thrombin
4 Citations (Scopus)

A framework for good biofilm reactor modeling practice (GBRMP)

Rittmann, B., Boltz, J. P., Brockmann, D., Daigger, G. T., Morgenroth, E., Sørensen, K. H., Takács, I., Van Loosdrecht, M. & Vanrolleghem, P. A., Mar 1 2018, In : Water Science and Technology. 77, 5, p. 1149-1164 16 p.

Research output: Contribution to journalArticle

Biofilms
biofilm
modeling
Calibration
calibration
18 Citations (Scopus)

A liquid-liquid transition in supercooled aqueous solution related to the HDA-LDA transition

Woutersen, S., Ensing, B., Hilbers, M., Zhao, Z. & Angell, C., Mar 9 2018, In : Science. 359, 6380, p. 1127-1131 5 p.

Research output: Contribution to journalArticle

aqueous solutions
liquids
water
pressure ice
crystallization
4 Citations (Scopus)

Ancient thioredoxins evolved to modern-day stability–function requirement by altering native state ensemble

Modi, T., Huihui, J., Ghosh, K. & Ozkan, S., Jun 19 2018, In : Philosophical Transactions of the Royal Society B: Biological Sciences. 373, 1749, 20170184.

Research output: Contribution to journalArticle

Thioredoxins
protein
Proteins
proteins
Catalytic Domain
3 Citations (Scopus)

A new era for electron bifurcation

Peters, J. W., Beratan, D. N., Bothner, B., Dyer, R. B., Harwood, C. S., Heiden, Z. M., Hille, R., Jones, A., King, P. W., Lu, Y., Lubner, C. E., Minteer, S. D., Mulder, D. W., Raugei, S., Schut, G. J., Seefeldt, L. C., Tokmina-Lukaszewska, M., Zadvornyy, O. A., Zhang, P. & Adams, M. WW., Dec 1 2018, In : Current Opinion in Chemical Biology. 47, p. 32-38 7 p.

Research output: Contribution to journalReview article

Electrons
Biochemical Phenomena
Anaerobiosis
Electron Transport Complex III
Redox reactions

A new niche for anoxygenic phototrophs as endoliths

Roush, D., Couradeau, E., Guida, B., Neuer, S. & Garcia-Pichel, F., Feb 1 2018, In : Applied and Environmental Microbiology. 84, 4, e02055-17.

Research output: Contribution to journalArticle

photosynthetic bacteria
autotrophs
niche
niches
Bacteria
3 Citations (Scopus)

A New Version of the Lithium Ion Conducting Plastic Crystal Solid Electrolyte

Klein, I. S., Zhao, Z., Davidowski, S. K., Yarger, J. & Angell, C., Jan 1 2018, (Accepted/In press) In : Advanced Energy Materials.

Research output: Contribution to journalArticle

Solid electrolytes
Lithium
Electrolytes
Alkalies
Salts
1 Citation (Scopus)

A novel modelling mechanism of PAEL receptor and GABARAPL2 interaction involved in Parkinson's disease

Dutta, P., Dargahi, L., O'Connell, K. E., Bolia, A., Ozkan, S., Sailer, A. W. & Dev, K. K., Apr 23 2018, In : Neuroscience Letters. 673, p. 12-18 7 p.

Research output: Contribution to journalArticle

Endothelin Receptors
Parkinson Disease
Autophagy
Receptor Aggregation
Aminobutyrates
85 Citations (Scopus)

Beyond fossil fuel–driven nitrogen transformations

Chen, J. G., Crooks, R. M., Seefeldt, L. C., Bren, K. L., Morris Bullock, R., Darensbourg, M. Y., Holland, P. L., Hoffman, B., Janik, M. J., Jones, A., Kanatzidis, M. G., King, P., Lancaster, K. M., Lymar, S. V., Pfromm, P., Schneider, W. F. & Schrock, R. R., May 25 2018, In : Science. 360, 6391, eaar6611.

Research output: Contribution to journalReview article

fossil
fossil fuel
nitrogen
nitrogen cycle
industrial production
3 Citations (Scopus)

Binding of ferredoxin to algal photosystem I involves a single binding site and is composed of two thermodynamically distinct events

Marco, P., Kozuleva, M., Eilenberg, H., Mazor, Y., Gimeson, P., Kanygin, A., Redding, K., Weiner, I. & Yacoby, I., Apr 1 2018, In : Biochimica et Biophysica Acta - Bioenergetics. 1859, 4, p. 234-243 10 p.

Research output: Contribution to journalArticle

Photosystem I Protein Complex
Ferredoxins
Binding Sites
Association reactions
Photosynthetic Reaction Center Complex Proteins
21 Citations (Scopus)

Biofilms, active substrata, and me

Rittmann, B., Apr 1 2018, In : Water Research. 132, p. 135-145 11 p.

Research output: Contribution to journalReview article

Biofilms
biofilm
Anodes
Photocatalysis
substrate
6 Citations (Scopus)

Bioreduction of Antimonate by Anaerobic Methane Oxidation in a Membrane Biofilm Batch Reactor

Lai, C. Y., Dong, Q. Y., Rittmann, B. & Zhao, H. P., Aug 7 2018, In : Environmental Science and Technology. 52, 15, p. 8693-8700 8 p.

Research output: Contribution to journalArticle

Methane
Batch reactors
Biofilms
biofilm
methane
4 Citations (Scopus)

Biotechnological and protein-engineering implications of ancestral protein resurrection

Risso, V. A., Sanchez-Ruiz, J. M. & Ozkan, S., Aug 1 2018, In : Current Opinion in Structural Biology. 51, p. 106-115 10 p.

Research output: Contribution to journalReview article

Protein Engineering
Proteins
9 Citations (Scopus)

Biotechnological revalorization of Tequila waste and by-product streams for cleaner production – A review from bio-refinery perspective

Alemán-Nava, G. S., Gatti, I. A., Parra-Saldivar, R., Dallemand, J. F., Rittmann, B. & Iqbal, H. M. N., Jan 20 2018, In : Journal of Cleaner Production. 172, p. 3713-3720 8 p.

Research output: Contribution to journalArticle

cleaner production
Byproducts
industry
biotransformation
Processing
2 Citations (Scopus)

Breakdown of the Stokes-Einstein relation above the melting temperature in a liquid phase-change material

Wei, S., Evenson, Z., Stolpe, M., Lucas, P. & Angell, C., Nov 30 2018, In : Science advances. 4, 11, eaat8632.

Research output: Contribution to journalArticle

phase change materials
liquid phases
breakdown
melting
viscosity
8 Citations (Scopus)

Bromate and Nitrate Bioreduction Coupled with Poly-β-hydroxybutyrate Production in a Methane-Based Membrane Biofilm Reactor

Lai, C. Y., Lv, P. L., Dong, Q. Y., Yeo, S. L., Rittmann, B. & Zhao, H. P., Jun 19 2018, In : Environmental Science and Technology. 52, 12, p. 7024-7031 8 p.

Research output: Contribution to journalArticle

Bromates
Hydroxybutyrates
Methane
Biofilms
Nitrates
3 Citations (Scopus)

Catalytic conversion of cyanobacteria-derived fatty acids to alkanes for biorenewable synthetic paraffinic kerosene

Schulz, T. C., Oelschlager, M., Thompson, S. T., Vermaas, W., Nielsen, D. & Lamb, H. H., Jan 1 2018, In : Sustainable Energy and Fuels. 2, 4, p. 882-893 12 p.

Research output: Contribution to journalArticle

Open Access
Kerosene
Fatty acids
Paraffins
Purification
Acids
2 Citations (Scopus)

Cell disruption by cationic surfactants affects bioproduct recovery from Synechocystis sp. PCC 6803

Lai, Y. J. S., Zhou, Y., Eustance, E., Straka, L., Wang, Z. & Rittmann, B., Sep 1 2018, In : Algal Research. 34, p. 250-255 6 p.

Research output: Contribution to journalArticle

biobased products
Synechocystis sp. PCC 6803
bromides
pigments
lipids
1 Citation (Scopus)

Characterization and high-throughput sequencing of a trichlorophenol-dechlorinating microbial community acclimated from sewage sludge

Song, J., Chen, L., Chen, H., Sheng, F., Xing, D., Li, L., Zhang, Y. & Rittmann, B., Oct 1 2018, In : Journal of Cleaner Production. 197, p. 306-313 8 p.

Research output: Contribution to journalArticle

Dechlorination
Sewage sludge
dechlorination
microbial community
Throughput
3 Citations (Scopus)

Chirality-Induced Electron Spin Polarization and Enantiospecific Response in Solid-State Cross-Polarization Nuclear Magnetic Resonance

Santos, J. I., Rivilla, I., Cossío, F. P., Matxain, J. M., Grzelczak, M., Mazinani, S. K. S., Ugalde, J. M. & Mujica, V., Nov 27 2018, In : ACS Nano. 12, 11, p. 11426-11433 8 p.

Research output: Contribution to journalArticle

Spin polarization
Chirality
cross polarization
chirality
electron spin
1 Citation (Scopus)

Climate Change and Energy Technologies in Undergraduate Introductory Science Textbooks

Yoho, R. A. & Rittmann, B., Apr 20 2018, (Accepted/In press) In : Environmental Communication. p. 1-13 13 p.

Research output: Contribution to journalArticle

textbook
climate change
global climate
citizenship
terminology

Coevolving residues inform protein dynamics profiles and disease susceptibility of nSNVs

Butler, B. M., Kazan, I. C., Kumar, A. & Ozkan, S., Nov 1 2018, In : PLoS Computational Biology. 14, 11, e1006626.

Research output: Contribution to journalArticle

Disease Susceptibility
Susceptibility
disease resistance
Proteins
Protein

Competition for electrons between mono-oxygenations of pyridine and 2-hydroxypyridine

Yang, C., Tang, Y., Xu, H., Yan, N., Li, N., Zhang, Y. & Rittmann, B., May 21 2018, (Accepted/In press) In : Biodegradation. p. 1-9 9 p.

Research output: Contribution to journalArticle

Oxygenation
oxygenation
Pyridine
Electrons
electron
4 Citations (Scopus)

Competition for molecular oxygen and electron donor between phenol and quinoline during their simultaneous biodegradation

Zou, S., Zhang, B., Yan, N., Zhang, C., Xu, H., Zhang, Y. & Rittmann, B., Jan 1 2018, (Accepted/In press) In : Process Biochemistry.

Research output: Contribution to journalArticle

Molecular oxygen
Phenol
Biodegradation
Phenols
Electrons
9 Citations (Scopus)

Complete dechlorination and mineralization of pentachlorophenol (PCP) in a hydrogen-based membrane biofilm reactor (MBfR)

Long, M., Ilhan, Z. E., Xia, S., Zhou, C. & Rittmann, B., Nov 1 2018, In : Water Research. 144, p. 134-144 11 p.

Research output: Contribution to journalArticle

Dechlorination
PCP
Biofilms
dechlorination
biofilm
1 Citation (Scopus)

Constructing Submonolayer DNA Origami Scaffold on Gold Electrode for Wiring of Redox Enzymatic Cascade Pathways

Ge, Z., Fu, J., Liu, M., Jiang, S., Andreoni, A., Zuo, X., Liu, Y., Yan, H. & Fan, C., Jan 1 2018, (Accepted/In press) In : ACS Applied Materials and Interfaces.

Research output: Contribution to journalArticle

Electric wiring
Scaffolds
Microelectronics
Gold
DNA
3 Citations (Scopus)

Controlling Proton-Coupled Electron Transfer in Bioinspired Artificial Photosynthetic Relays

Odella, E., Mora, S. J., Wadsworth, B. L., Huynh, M. T., Goings, J. J., Liddell, P. A., Groy, T. L., Gervaldo, M., Sereno, L. E., Gust, D., Moore, T., Moore, G., Hammes-Schiffer, S. & Moore, A., Nov 14 2018, In : Journal of the American Chemical Society. 140, 45, p. 15450-15460 11 p.

Research output: Contribution to journalArticle

Protons
Phenol
Imines
Electrons
Phenols
2 Citations (Scopus)

Desert leaf litter decay: Coupling of microbial respiration, water-soluble fractions and photodegradation

Day, T., Bliss, M. S., Tomes, A. R., Ruhland, C. T. & Guénon, R., Jan 1 2018, (Accepted/In press) In : Global Change Biology.

Research output: Contribution to journalArticle

Photodegradation
photodegradation
leaf litter
litter
respiration