Work in progress - Java simulations of DSP algorithms for ion-channel sensors

Andreas Spanias, Peter Knee, Homin Kwon, Karthikeyan Natesan, Jayaraman Jayaraman, Photini Spanias

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Citations (Scopus)

Abstract

The use of ion channels as sensing elements for chemical and biological agents is a rapidly developing area. Ion channels are proteins that mediate the flow of ions and molecules across membranes such as cell walls. At Arizona State University researchers have devised a silicon ion-channel sensor. Experiments have been conducted to characterize this sensor and examine its utility in various applications. This paper presents Java functions developed to demonstrate ion channel signals and their analysis using DSP functions in class. The Java functions were developed in the J-DSP visual programming environment. Students can experiment with ion-channel signals, extract features, and differentiate signals representing the presence of different analytes.

Original languageEnglish (US)
Title of host publicationProceedings - Frontiers in Education Conference, FIE
DOIs
StatePublished - 2008
Event38th ASEE/IEEE Frontiers in Education Conference, FIE 2008 - Saratoga Springs, NY, United States
Duration: Oct 22 2008Oct 25 2008

Other

Other38th ASEE/IEEE Frontiers in Education Conference, FIE 2008
CountryUnited States
CitySaratoga Springs, NY
Period10/22/0810/25/08

Fingerprint

simulation
Sensors
Ions
experiment
programming
Chemical elements
student
Experiments
Cells
Students
Proteins
Membranes
Silicon
Molecules

Keywords

  • DSP
  • Educational software
  • Ion-channel signals

ASJC Scopus subject areas

  • Computer Science Applications
  • Software
  • Education

Cite this

Spanias, A., Knee, P., Kwon, H., Natesan, K., Jayaraman, J., & Spanias, P. (2008). Work in progress - Java simulations of DSP algorithms for ion-channel sensors. In Proceedings - Frontiers in Education Conference, FIE [4720669] https://doi.org/10.1109/FIE.2008.4720669

Work in progress - Java simulations of DSP algorithms for ion-channel sensors. / Spanias, Andreas; Knee, Peter; Kwon, Homin; Natesan, Karthikeyan; Jayaraman, Jayaraman; Spanias, Photini.

Proceedings - Frontiers in Education Conference, FIE. 2008. 4720669.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Spanias, A, Knee, P, Kwon, H, Natesan, K, Jayaraman, J & Spanias, P 2008, Work in progress - Java simulations of DSP algorithms for ion-channel sensors. in Proceedings - Frontiers in Education Conference, FIE., 4720669, 38th ASEE/IEEE Frontiers in Education Conference, FIE 2008, Saratoga Springs, NY, United States, 10/22/08. https://doi.org/10.1109/FIE.2008.4720669
Spanias A, Knee P, Kwon H, Natesan K, Jayaraman J, Spanias P. Work in progress - Java simulations of DSP algorithms for ion-channel sensors. In Proceedings - Frontiers in Education Conference, FIE. 2008. 4720669 https://doi.org/10.1109/FIE.2008.4720669
Spanias, Andreas ; Knee, Peter ; Kwon, Homin ; Natesan, Karthikeyan ; Jayaraman, Jayaraman ; Spanias, Photini. / Work in progress - Java simulations of DSP algorithms for ion-channel sensors. Proceedings - Frontiers in Education Conference, FIE. 2008.
@inproceedings{929b2b91b68e4dc2b876fa3ca9dd8ae5,
title = "Work in progress - Java simulations of DSP algorithms for ion-channel sensors",
abstract = "The use of ion channels as sensing elements for chemical and biological agents is a rapidly developing area. Ion channels are proteins that mediate the flow of ions and molecules across membranes such as cell walls. At Arizona State University researchers have devised a silicon ion-channel sensor. Experiments have been conducted to characterize this sensor and examine its utility in various applications. This paper presents Java functions developed to demonstrate ion channel signals and their analysis using DSP functions in class. The Java functions were developed in the J-DSP visual programming environment. Students can experiment with ion-channel signals, extract features, and differentiate signals representing the presence of different analytes.",
keywords = "DSP, Educational software, Ion-channel signals",
author = "Andreas Spanias and Peter Knee and Homin Kwon and Karthikeyan Natesan and Jayaraman Jayaraman and Photini Spanias",
year = "2008",
doi = "10.1109/FIE.2008.4720669",
language = "English (US)",
booktitle = "Proceedings - Frontiers in Education Conference, FIE",

}

TY - GEN

T1 - Work in progress - Java simulations of DSP algorithms for ion-channel sensors

AU - Spanias, Andreas

AU - Knee, Peter

AU - Kwon, Homin

AU - Natesan, Karthikeyan

AU - Jayaraman, Jayaraman

AU - Spanias, Photini

PY - 2008

Y1 - 2008

N2 - The use of ion channels as sensing elements for chemical and biological agents is a rapidly developing area. Ion channels are proteins that mediate the flow of ions and molecules across membranes such as cell walls. At Arizona State University researchers have devised a silicon ion-channel sensor. Experiments have been conducted to characterize this sensor and examine its utility in various applications. This paper presents Java functions developed to demonstrate ion channel signals and their analysis using DSP functions in class. The Java functions were developed in the J-DSP visual programming environment. Students can experiment with ion-channel signals, extract features, and differentiate signals representing the presence of different analytes.

AB - The use of ion channels as sensing elements for chemical and biological agents is a rapidly developing area. Ion channels are proteins that mediate the flow of ions and molecules across membranes such as cell walls. At Arizona State University researchers have devised a silicon ion-channel sensor. Experiments have been conducted to characterize this sensor and examine its utility in various applications. This paper presents Java functions developed to demonstrate ion channel signals and their analysis using DSP functions in class. The Java functions were developed in the J-DSP visual programming environment. Students can experiment with ion-channel signals, extract features, and differentiate signals representing the presence of different analytes.

KW - DSP

KW - Educational software

KW - Ion-channel signals

UR - http://www.scopus.com/inward/record.url?scp=78650758984&partnerID=8YFLogxK

UR - http://www.scopus.com/inward/citedby.url?scp=78650758984&partnerID=8YFLogxK

U2 - 10.1109/FIE.2008.4720669

DO - 10.1109/FIE.2008.4720669

M3 - Conference contribution

AN - SCOPUS:78650758984

BT - Proceedings - Frontiers in Education Conference, FIE

ER -