Use of SSR fragment lenght homozygotes for orangutan systematics

Sreetharan Kanthaswamy, O. R P Binida-Emonds, C. Warden, J. L. Viray, D. G. Smith

Research output: Contribution to journalArticle

5 Citations (Scopus)

Abstract

The use of simple sequence repeat (SSR) loci lacking length polymorphisms among their alleles (defined here as homozygotes) in systematic studies has thus far been largely ignored due to their apparent lack of genetic heterogeneity. However, in this paper we show that point mutations, insertions, and deletions within SSR loci of identical size can be highly informative for population genetic and evolutionary studies. Our preliminary study of the von Willebrand factor (vWF) locus shows that there is a significant level of divergence among the Bornean Orangutans which implies that present orangutan subpopulations in Borneo are genetically isolated from each other. However, our findings do not confirm that the Bornean and Sumatran Orangutans form two separate clades.

Original languageEnglish (US)
Pages (from-to)35-45
Number of pages11
JournalPrimates
Volume42
Issue number1
StatePublished - 2001
Externally publishedYes

Fingerprint

Pongo pygmaeus
homozygosity
microsatellite repeats
taxonomy
loci
blood coagulation factors
point mutation
Borneo
population genetics
genetic polymorphism
alleles

Keywords

  • Conservation
  • Microsatellite polymorphism
  • Phytogenetic analysis
  • Pongo pygmaeus
  • vWF

ASJC Scopus subject areas

  • Animal Science and Zoology

Cite this

Kanthaswamy, S., Binida-Emonds, O. R. P., Warden, C., Viray, J. L., & Smith, D. G. (2001). Use of SSR fragment lenght homozygotes for orangutan systematics. Primates, 42(1), 35-45.

Use of SSR fragment lenght homozygotes for orangutan systematics. / Kanthaswamy, Sreetharan; Binida-Emonds, O. R P; Warden, C.; Viray, J. L.; Smith, D. G.

In: Primates, Vol. 42, No. 1, 2001, p. 35-45.

Research output: Contribution to journalArticle

Kanthaswamy, S, Binida-Emonds, ORP, Warden, C, Viray, JL & Smith, DG 2001, 'Use of SSR fragment lenght homozygotes for orangutan systematics', Primates, vol. 42, no. 1, pp. 35-45.
Kanthaswamy S, Binida-Emonds ORP, Warden C, Viray JL, Smith DG. Use of SSR fragment lenght homozygotes for orangutan systematics. Primates. 2001;42(1):35-45.
Kanthaswamy, Sreetharan ; Binida-Emonds, O. R P ; Warden, C. ; Viray, J. L. ; Smith, D. G. / Use of SSR fragment lenght homozygotes for orangutan systematics. In: Primates. 2001 ; Vol. 42, No. 1. pp. 35-45.
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