Understanding of assembly phenomena by aromatic-aromatic interactions

Benzene Dimer and the substituted systems

Eun Cheol Lee, Dongwook Kim, Petr Jurečka, Tarakeshwar Pilarisetty, Pavel Hobza, Kwang S. Kim

Research output: Contribution to journalArticle

508 Citations (Scopus)

Abstract

Interactions involving aromatic rings are important in molecular/ biomolecular assembly and engineering. As a consequence, there have been a number of investigations on dimers involving benzene or other substituted π systems. In this Feature Article, we examine the relevance of the magnitudes of their attractive and repulsive interaction energy components in governing the geometries of several π-π systems. The geometries and the associated binding energies were evaluated at the complete basis set (CBS) limit of coupled cluster theory with singles, doubles, and perturbative triples excitations [CCSD(T)] using a least biased scheme for the given data set. The results for the benzene dimer indicate that the floppy T-shaped structure (center-to-center distance: 4.96 Å, with an axial benzene off-centered above the facial benzene) is isoenergetic in zero-point-energy (ZPE) corrected binding energy (D0) to the displaced-stacked structure (vertical interplanar distance: 3.54 Å). However, the T-shaped structure is likely to be slightly more stable (D0 ≈ 2.4-2.5 kcal/mol) if quadruple excitations are included in the coupled cluster calculations. The presence of substituents on the aromatic ring, irrespective of their electron withdrawing or donating nature, leads to an increase in the binding energy, and the displaced-stacked conformations are more stabilized than the T-shaped conformers. This explains the wide prevalence of displaced stacked structures in organic crystals. Despite that the dispersion energy is dominating, the substituent as well as the conformational effects are correlated to the electrostatic interaction. This electrostatic origin implies that the substituent effect would be reduced in polar solution, but important in apolar media, in particular, for assembling processes.

Original languageEnglish (US)
Pages (from-to)3446-3457
Number of pages12
JournalJournal of Physical Chemistry A
Volume111
Issue number18
DOIs
StatePublished - May 10 2007
Externally publishedYes

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Benzene
Dimers
assembly
Binding energy
benzene
dimers
binding energy
interactions
electrostatics
Geometry
zero point energy
rings
geometry
assembling
Coulomb interactions
excitation
Conformations
Electrostatics
engineering
Crystals

ASJC Scopus subject areas

  • Physical and Theoretical Chemistry

Cite this

Understanding of assembly phenomena by aromatic-aromatic interactions : Benzene Dimer and the substituted systems. / Lee, Eun Cheol; Kim, Dongwook; Jurečka, Petr; Pilarisetty, Tarakeshwar; Hobza, Pavel; Kim, Kwang S.

In: Journal of Physical Chemistry A, Vol. 111, No. 18, 10.05.2007, p. 3446-3457.

Research output: Contribution to journalArticle

Lee, Eun Cheol ; Kim, Dongwook ; Jurečka, Petr ; Pilarisetty, Tarakeshwar ; Hobza, Pavel ; Kim, Kwang S. / Understanding of assembly phenomena by aromatic-aromatic interactions : Benzene Dimer and the substituted systems. In: Journal of Physical Chemistry A. 2007 ; Vol. 111, No. 18. pp. 3446-3457.
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