The protein structure initiative structural genomics knowledgebase

Helen M. Berman, John D. Westbrook, Margaret J. Gabanyi, Wendy Tao, Raship Shah, Andrei Kouranov, Torsten Schwede, Konstantin Arnold, Florian Kiefer, Lorenza Bordoli, Jürgen Kopp, Michael Podvinec, Paul D. Adams, Lester G. Carter, Wladek Minor, Rajesh Nair, Joshua LaBaer

Research output: Contribution to journalArticle

71 Citations (Scopus)

Abstract

The Protein Structure Initiative Structural Genomics Knowledgebase (PSI SGKB, http://kb.psi-structuralgenomics.org) has been created to turn the products of the PSI structural genomics effort into knowledge that can be used by the biological research community to understand living systems and disease. This resource provides central access to structures in the Protein Data Bank (PDB), along with functional annotations, associated homology models, worldwide protein target tracking information, available protocols and the potential to obtain DNA materials for many of the targets. It also offers the ability to search all of the structural and methodological publications and the innovative technologies that were catalyzed by the PSI's high-throughput research efforts. In collaboration with the Nature Publishing Group, the PSI SGKB provides a research library, editorials about new research advances, news and an events calendar to present a broader view of structural biology and structural genomics. By making these resources freely available, the PSI SGKB serves as a bridge to connect the structural biology and the greater biomedical communities.

Original languageEnglish (US)
JournalNucleic Acids Research
Volume37
Issue numberSUPPL. 1
DOIs
StatePublished - 2009
Externally publishedYes

Fingerprint

Knowledge Bases
Genomics
Research
Proteins
Biota
Libraries
Publications
Databases
Technology
DNA

ASJC Scopus subject areas

  • Genetics

Cite this

Berman, H. M., Westbrook, J. D., Gabanyi, M. J., Tao, W., Shah, R., Kouranov, A., ... LaBaer, J. (2009). The protein structure initiative structural genomics knowledgebase. Nucleic Acids Research, 37(SUPPL. 1). https://doi.org/10.1093/nar/gkn790

The protein structure initiative structural genomics knowledgebase. / Berman, Helen M.; Westbrook, John D.; Gabanyi, Margaret J.; Tao, Wendy; Shah, Raship; Kouranov, Andrei; Schwede, Torsten; Arnold, Konstantin; Kiefer, Florian; Bordoli, Lorenza; Kopp, Jürgen; Podvinec, Michael; Adams, Paul D.; Carter, Lester G.; Minor, Wladek; Nair, Rajesh; LaBaer, Joshua.

In: Nucleic Acids Research, Vol. 37, No. SUPPL. 1, 2009.

Research output: Contribution to journalArticle

Berman, HM, Westbrook, JD, Gabanyi, MJ, Tao, W, Shah, R, Kouranov, A, Schwede, T, Arnold, K, Kiefer, F, Bordoli, L, Kopp, J, Podvinec, M, Adams, PD, Carter, LG, Minor, W, Nair, R & LaBaer, J 2009, 'The protein structure initiative structural genomics knowledgebase', Nucleic Acids Research, vol. 37, no. SUPPL. 1. https://doi.org/10.1093/nar/gkn790
Berman HM, Westbrook JD, Gabanyi MJ, Tao W, Shah R, Kouranov A et al. The protein structure initiative structural genomics knowledgebase. Nucleic Acids Research. 2009;37(SUPPL. 1). https://doi.org/10.1093/nar/gkn790
Berman, Helen M. ; Westbrook, John D. ; Gabanyi, Margaret J. ; Tao, Wendy ; Shah, Raship ; Kouranov, Andrei ; Schwede, Torsten ; Arnold, Konstantin ; Kiefer, Florian ; Bordoli, Lorenza ; Kopp, Jürgen ; Podvinec, Michael ; Adams, Paul D. ; Carter, Lester G. ; Minor, Wladek ; Nair, Rajesh ; LaBaer, Joshua. / The protein structure initiative structural genomics knowledgebase. In: Nucleic Acids Research. 2009 ; Vol. 37, No. SUPPL. 1.
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