The bioenergetic costs of a gene

Michael Lynch, Georgi K. Marinov

Research output: Contribution to journalArticle

102 Citations (Scopus)

Abstract

An enduring mystery of evolutionary genomics concerns the mechanisms responsible for lineage-specific expansions of genome size in eukaryotes, especially in multicellular species. One idea is that all excess DNA is mutationally hazardous, but weakly enough so that genome-size expansion passively emerges in species experiencing relatively low efficiency of selection owing to small effective population sizes. Another idea is that substantial gene additions were impossible without the energetic boost provided by the colonizing mitochondrion in the eukaryotic lineage. Contrary to this latter view, analysis of cellular energetics and genomics data from a wide variety of species indicates that, relative to the lifetime ATP requirements of a cell, the costs of a gene at the DNA, RNA, and protein levels decline with cell volume in both bacteria and eukaryotes. Moreover, these costs are usually sufficiently large to be perceived by natural selection in bacterial populations, but not in eukaryotes experiencing high levels of random genetic drift. Thus, for scaling reasons that are not yet understood, by virtue of their large size alone, eukaryotic cells are subject to a broader set of opportunities for the colonization of novel genes manifesting weakly advantageous or even transiently disadvantageous phenotypic effects. These results indicate that the origin of the mitochondrion was not a prerequisite for genome-size expansion.

Original languageEnglish (US)
Pages (from-to)15690-15695
Number of pages6
JournalProceedings of the National Academy of Sciences of the United States of America
Volume112
Issue number51
DOIs
StatePublished - Dec 22 2015
Externally publishedYes

Fingerprint

Genome Size
Eukaryota
Energy Metabolism
Genomics
Costs and Cost Analysis
Mitochondria
Genes
Genetic Drift
Genetic Selection
DNA
Eukaryotic Cells
Population Density
Cell Size
Adenosine Triphosphate
RNA
Bacteria
Population
Proteins

Keywords

  • Cellular bioenergetics
  • Evolutionary genomics
  • Gene cost
  • Transcription
  • Translation

ASJC Scopus subject areas

  • General

Cite this

The bioenergetic costs of a gene. / Lynch, Michael; Marinov, Georgi K.

In: Proceedings of the National Academy of Sciences of the United States of America, Vol. 112, No. 51, 22.12.2015, p. 15690-15695.

Research output: Contribution to journalArticle

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