Probing site-specific 13C/15N-isotope enrichment of spider silk with liquid-state NMR spectroscopy Xiangyan Shi1

Jeffery Yarger, Gregory P. Holland

Research output: Contribution to journalArticle

5 Citations (Scopus)

Abstract

Solid-state nuclear magnetic resonance (NMR) has been extensively used to elucidate spider silk protein structure and dynamics. In many of these studies, site-specific isotope enrichment is critical for designing particular NMR methods for silk structure determination. The commonly used isotope analysis techniques, isotope-ratio mass spectroscopy and liquid/gas chromatography-mass spectroscopy, are typically not capable of providing the site-specific isotope information for many systems because an appropriate sample derivatization method is not available. In contrast, NMR does not require any sample derivatization or separation prior to analysis. In this article, conventional liquid-state 1H NMR was implemented to evaluate incorporation of 13C/ 15N-labeled amino acids in hydrolyzed spider dragline silk. To determine site-specific 13C and 15N isotope enrichments, an analysis method was developed to fit the 1H-13C and 1H- 15N J-splitting (JCH and JNH) 1H NMR peak patterns of hydrolyzed silk fiber. This is demonstrated for Nephila clavipes spiders, where [U- 13C3,15N]-Ala and [1-13C,15N]-Gly were dissolved in their water supplies. Overall, contents for Ala and Gly isotopomers are extracted for these silk samples. The current methodology can be applied to many fields where site-specific tracking of isotopes is of interest.

Original languageEnglish (US)
Pages (from-to)3997-4008
Number of pages12
JournalAnalytical and Bioanalytical Chemistry
Volume405
Issue number12
DOIs
StatePublished - 2013

Fingerprint

Spiders
Silk
Isotopes
Nuclear magnetic resonance spectroscopy
Magnetic Resonance Spectroscopy
Nuclear magnetic resonance
Liquids
Mass Spectrometry
Arthropod Proteins
Spectroscopy
Water Supply
Liquid chromatography
Water supply
Information Systems
Gas chromatography
Gas Chromatography
Amino Acids
Fibers
Proteins

Keywords

  • Isotope labeling
  • NMR
  • Site-specific isotope enrichment
  • Spider dragline silk

ASJC Scopus subject areas

  • Analytical Chemistry
  • Biochemistry

Cite this

Probing site-specific 13C/15N-isotope enrichment of spider silk with liquid-state NMR spectroscopy Xiangyan Shi1. / Yarger, Jeffery; Holland, Gregory P.

In: Analytical and Bioanalytical Chemistry, Vol. 405, No. 12, 2013, p. 3997-4008.

Research output: Contribution to journalArticle

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