Niche and metabolic principles explain patterns of diversity and distribution

Theory and a case study with soil bacterial communities

Jordan Okie, David J. Van Horn, David Storch, John E. Barrett, Michael N. Gooseff, Lenka Kopsova, Cristina D. Takacs-Vesbach

Research output: Contribution to journalArticle

17 Citations (Scopus)

Abstract

The causes of biodiversity patterns are controversial and elusive due to complex environmental variation, covarying changes in communities, and lack of baseline and null theories to differentiate straightforward causes from more complex mechanisms. To address these limitations, we developed general diversity theory integrating metabolic principles with niche-based community assembly. We evaluated this theory by investigating patterns in the diversity and distribution of soil bacteria taxa across four orders of magnitude variation in spatial scale on an Antarctic mountainside in low complexity, highly oligotrophic soils. Our theory predicts that lower temperatures should reduce taxon niche widths along environmental gradients due to decreasing growth rates, and the changing niche widths should lead to contrasting a- and b-diversity patterns. In accord with the predictions, a-diversity, niche widths and occupancies decreased while b-diversity increased with increasing elevation and decreasing temperature. The theory also successfully predicts a hump-shaped relationship between a-diversity and pH and a negative relationship between a-diversity and salinity. Thus, a few simple principles explained systematic microbial diversity variation along multiple gradients. Such general theory can be used to disentangle baseline effects from more complex effects of temperature and other variables on biodiversity patterns in a variety of ecosystems and organisms.

Original languageEnglish (US)
Article number20142630
JournalProceedings of the Royal Society B: Biological Sciences
Volume282
Issue number1809
DOIs
StatePublished - Jun 22 2015

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soil bacteria
niche
niches
Soil
Biodiversity
case studies
Soils
Temperature
soil
Salinity
biodiversity
Ecosystems
temperature
Ecosystem
Bacteria
spatial variation
environmental gradient
Growth
salinity
prediction

Keywords

  • Elevational gradient
  • Macroecology
  • Metabolic theory
  • Microbial biogeography
  • Microbial communities
  • Species richness patterns

ASJC Scopus subject areas

  • Biochemistry, Genetics and Molecular Biology(all)
  • Immunology and Microbiology(all)
  • Environmental Science(all)
  • Agricultural and Biological Sciences(all)

Cite this

Niche and metabolic principles explain patterns of diversity and distribution : Theory and a case study with soil bacterial communities. / Okie, Jordan; Van Horn, David J.; Storch, David; Barrett, John E.; Gooseff, Michael N.; Kopsova, Lenka; Takacs-Vesbach, Cristina D.

In: Proceedings of the Royal Society B: Biological Sciences, Vol. 282, No. 1809, 20142630, 22.06.2015.

Research output: Contribution to journalArticle

Okie, Jordan ; Van Horn, David J. ; Storch, David ; Barrett, John E. ; Gooseff, Michael N. ; Kopsova, Lenka ; Takacs-Vesbach, Cristina D. / Niche and metabolic principles explain patterns of diversity and distribution : Theory and a case study with soil bacterial communities. In: Proceedings of the Royal Society B: Biological Sciences. 2015 ; Vol. 282, No. 1809.
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