Nanovirus-alphasatellite complex identified in Vicia cracca in the Rhône delta region of France

Romain Gallet, Simona Kraberger, Denis Filloux, Serge Galzi, Hugo Fontes, Darren P. Martin, Arvind Varsani, Philippe Roumagnac

Research output: Contribution to journalArticle

7 Citations (Scopus)

Abstract

Nanoviruses are multi-component plant-infecting single-stranded DNA viruses. Using a viral metagenomics-informed approach, a new nanovirus and two associated alphasatellite molecules have been identified in an uncultivated asymptomatic Vicia cracca plant in the Rhône region of France. This novel nanovirus genome includes eight genomic components (named DNA-R, DNA-S, DNA-M, DNA-C, DNA-N, DNA-U1, DNA-U2 and DNA-U4) and, across all components, shares < 66% pairwise sequence identity with other nanovirus genomes. The two associated alphasatellites share 62% identity with each other and < 81% identity will all other nanovirus-associated alphasatellites.

Original languageEnglish (US)
Pages (from-to)1-6
Number of pages6
JournalArchives of Virology
DOIs
StateAccepted/In press - Nov 20 2017

Fingerprint

Nanovirus
Vicia
France
DNA
Genome
Plant Structures
Metagenomics
DNA Viruses
Single-Stranded DNA

Keywords

  • cow vetch
  • Nanoviridae
  • ssDNA virus

ASJC Scopus subject areas

  • Virology

Cite this

Gallet, R., Kraberger, S., Filloux, D., Galzi, S., Fontes, H., Martin, D. P., ... Roumagnac, P. (Accepted/In press). Nanovirus-alphasatellite complex identified in Vicia cracca in the Rhône delta region of France. Archives of Virology, 1-6. https://doi.org/10.1007/s00705-017-3634-4

Nanovirus-alphasatellite complex identified in Vicia cracca in the Rhône delta region of France. / Gallet, Romain; Kraberger, Simona; Filloux, Denis; Galzi, Serge; Fontes, Hugo; Martin, Darren P.; Varsani, Arvind; Roumagnac, Philippe.

In: Archives of Virology, 20.11.2017, p. 1-6.

Research output: Contribution to journalArticle

Gallet, Romain ; Kraberger, Simona ; Filloux, Denis ; Galzi, Serge ; Fontes, Hugo ; Martin, Darren P. ; Varsani, Arvind ; Roumagnac, Philippe. / Nanovirus-alphasatellite complex identified in Vicia cracca in the Rhône delta region of France. In: Archives of Virology. 2017 ; pp. 1-6.
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