Molecular characterization of faba bean necrotic yellows viruses in Tunisia

Simona Kraberger, Safaa G. Kumari, Asma Najar, Daisy Stainton, Darren P. Martin, Arvind Varsani

Research output: Contribution to journalArticle

3 Citations (Scopus)

Abstract

Faba bean necrotic yellows virus (FBNYV) (genus Nanovirus; family Nanoviridae) has a genome comprising eight individually encapsidated circular single-stranded DNA components. It has frequently been found infecting faba bean (Vicia faba L.) and chickpea (Cicer arietinum L.) in association with satellite molecules (alphasatellites). Genome sequences of FBNYV from Azerbaijan, Egypt, Iran, Morocco, Spain and Syria have been determined previously and we now report the first five genome sequences of FBNYV and associated alphasatellites from faba bean sampled in Tunisia. In addition, we have determined the genome sequences of two additional FBNYV isolates from chickpea plants sampled in Syria and Iran. All individual FBNYV genome component sequences that were determined here share > 84% nucleotide sequence identity with FBNYV sequences available in public databases, with the DNA-M component displaying the highest degree of diversity. As with other studied nanoviruses, recombination and genome component reassortment occurs frequently both between FBNYV genomes and between genomes of nanoviruses belonging to other species.

Original languageEnglish (US)
Pages (from-to)1-8
Number of pages8
JournalArchives of Virology
DOIs
StateAccepted/In press - Nov 17 2017

Fingerprint

Vicia faba
Tunisia
Viruses
Nanovirus
Genome
Cicer
Genome Components
Syria
Iran
Nanoviridae
Azerbaijan
Myeloma Proteins
Circular DNA
Morocco
Viral Structures
Egypt
Single-Stranded DNA
Nucleic Acid Databases
Spain
Genetic Recombination

ASJC Scopus subject areas

  • Virology

Cite this

Molecular characterization of faba bean necrotic yellows viruses in Tunisia. / Kraberger, Simona; Kumari, Safaa G.; Najar, Asma; Stainton, Daisy; Martin, Darren P.; Varsani, Arvind.

In: Archives of Virology, 17.11.2017, p. 1-8.

Research output: Contribution to journalArticle

Kraberger, Simona ; Kumari, Safaa G. ; Najar, Asma ; Stainton, Daisy ; Martin, Darren P. ; Varsani, Arvind. / Molecular characterization of faba bean necrotic yellows viruses in Tunisia. In: Archives of Virology. 2017 ; pp. 1-8.
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