Kinetic and spectroscopic studies on the quercetin 2,3-dioxygenase from Bacillus subtilis

Matthew R. Schaab, Brett M. Barney, Wilson A. Francisco

Research output: Contribution to journalArticle

73 Citations (Scopus)

Abstract

Quercetin 2,3-dioxygenase from Bacillus subtilis (QueD) converts the flavonol quercetin and molecular oxygen to 2- protocatechuoylphloroglucinolcarboxylic acid and carbon monoxide. QueD, the only known quercetin 2,3-dioxygenase from a prokaryotic organism, has been described as an Fe2+-dependent bicupin dioxygenase. Metal-substituted QueDs were generated by expressing the enzyme in Escherichia coli grown on minimal media in the presence of a number of divalent metals. The addition of Mn 2+, Co2+, and Cu2+ generated active enzymes, but the addition of Zn2+, Fe2+, and Cd2+ did not increase quercetinase activity to any significant level over a control in which no divalent ions were added to the media. The Mn2+- and Co 2+-containing QueDs were purified, characterized by metal analysis and EPR spectroscopy, and studied by steady-state kinetics. Mn2+ was found to be incorporated nearly stoichiometrically to the two cupin motifs. The hyperfine coupling constant of the g = 2 signal in the EPR spectra of the Mn2+-containing enzyme showed that the two Mn2+ ions are ligated in an octahedral coordination. The turnover number of this enzyme was found to be in the order of 25 s-1, nearly 40-fold higher than that of the Fe2+-containing enzyme and similar in magnitude to that of the Cu2+-containing quercertin 2,3-dioxygenase from Aspergillus japonicus. In addition, kinetic and spectroscopic data suggest that the catalytic mechanism of QueD is different from that of the Aspergillus quercetinases but similar to that proposed for the extradiol catechol dioxygenases. This study provides evidence that Mn2+ might be the preferred cofactor for this enzyme and identifies QueD as a new member of the manganese dioxygenase family.

Original languageEnglish (US)
Pages (from-to)1009-1016
Number of pages8
JournalBiochemistry
Volume45
Issue number3
DOIs
StatePublished - Jan 24 2006

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quercetin 2,3-dioxygenase
Bacilli
Dioxygenases
Bacillus subtilis
Kinetics
Enzymes
Aspergillus
Metals
Paramagnetic resonance
Metal analysis
Ions
Molecular oxygen
Coenzymes
Quercetin
Carbon Monoxide
Manganese
Escherichia coli
Spectrum Analysis
Spectroscopy
Oxygen

ASJC Scopus subject areas

  • Biochemistry

Cite this

Kinetic and spectroscopic studies on the quercetin 2,3-dioxygenase from Bacillus subtilis. / Schaab, Matthew R.; Barney, Brett M.; Francisco, Wilson A.

In: Biochemistry, Vol. 45, No. 3, 24.01.2006, p. 1009-1016.

Research output: Contribution to journalArticle

Schaab, Matthew R. ; Barney, Brett M. ; Francisco, Wilson A. / Kinetic and spectroscopic studies on the quercetin 2,3-dioxygenase from Bacillus subtilis. In: Biochemistry. 2006 ; Vol. 45, No. 3. pp. 1009-1016.
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