ESPRIT: Estimating Species Richness Using Large Collections of 16S rRNA Data

Yijun Sun, Yunpeng Cai, Li Liu, Fahong Yu, William Farmerie

Research output: Chapter in Book/Report/Conference proceedingChapter

Original languageEnglish (US)
Title of host publicationHandbook of Molecular Microbial Ecology I: Metagenomics and Complementary Approaches
PublisherJohn Wiley and Sons
Pages461-471
Number of pages11
ISBN (Print)9780470644799
DOIs
StatePublished - May 3 2011
Externally publishedYes

Keywords

  • ESPRIT, estimating species richness - using large collections of 16S rRNA data
  • ESPRIT, not computationally constrained - number of sequences analyzed, by capacity of computer cluster
  • Newly proposed ESPRIT algorithm - processing sequences within 10 h using a small CC

ASJC Scopus subject areas

  • Immunology and Microbiology(all)

Cite this

Sun, Y., Cai, Y., Liu, L., Yu, F., & Farmerie, W. (2011). ESPRIT: Estimating Species Richness Using Large Collections of 16S rRNA Data. In Handbook of Molecular Microbial Ecology I: Metagenomics and Complementary Approaches (pp. 461-471). John Wiley and Sons. https://doi.org/10.1002/9781118010518.ch53

ESPRIT : Estimating Species Richness Using Large Collections of 16S rRNA Data. / Sun, Yijun; Cai, Yunpeng; Liu, Li; Yu, Fahong; Farmerie, William.

Handbook of Molecular Microbial Ecology I: Metagenomics and Complementary Approaches. John Wiley and Sons, 2011. p. 461-471.

Research output: Chapter in Book/Report/Conference proceedingChapter

Sun, Y, Cai, Y, Liu, L, Yu, F & Farmerie, W 2011, ESPRIT: Estimating Species Richness Using Large Collections of 16S rRNA Data. in Handbook of Molecular Microbial Ecology I: Metagenomics and Complementary Approaches. John Wiley and Sons, pp. 461-471. https://doi.org/10.1002/9781118010518.ch53
Sun Y, Cai Y, Liu L, Yu F, Farmerie W. ESPRIT: Estimating Species Richness Using Large Collections of 16S rRNA Data. In Handbook of Molecular Microbial Ecology I: Metagenomics and Complementary Approaches. John Wiley and Sons. 2011. p. 461-471 https://doi.org/10.1002/9781118010518.ch53
Sun, Yijun ; Cai, Yunpeng ; Liu, Li ; Yu, Fahong ; Farmerie, William. / ESPRIT : Estimating Species Richness Using Large Collections of 16S rRNA Data. Handbook of Molecular Microbial Ecology I: Metagenomics and Complementary Approaches. John Wiley and Sons, 2011. pp. 461-471
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