ESPRIT: Estimating Species Richness Using Large Collections of 16S rRNA Data

Yijun Sun, Yunpeng Cai, Li Liu, Fahong Yu, William Farmerie

Research output: Chapter in Book/Report/Conference proceedingChapter

Original languageEnglish (US)
Title of host publicationHandbook of Molecular Microbial Ecology I
Subtitle of host publicationMetagenomics and Complementary Approaches
PublisherJohn Wiley and Sons
Pages461-471
Number of pages11
ISBN (Print)9780470644799
DOIs
StatePublished - May 3 2011
Externally publishedYes

Keywords

  • ESPRIT, estimating species richness - using large collections of 16S rRNA data
  • ESPRIT, not computationally constrained - number of sequences analyzed, by capacity of computer cluster
  • Newly proposed ESPRIT algorithm - processing sequences within 10 h using a small CC

ASJC Scopus subject areas

  • Immunology and Microbiology(all)

Cite this

Sun, Y., Cai, Y., Liu, L., Yu, F., & Farmerie, W. (2011). ESPRIT: Estimating Species Richness Using Large Collections of 16S rRNA Data. In Handbook of Molecular Microbial Ecology I: Metagenomics and Complementary Approaches (pp. 461-471). John Wiley and Sons. https://doi.org/10.1002/9781118010518.ch53