Abstract

The process of cell fate determination has been depicted intuitively as cells travelling and resting on a rugged landscape, which has been probed by various theoretical studies. However, few studies have experimentally demonstrated how underlying gene regulatory networks shape the landscape and hence orchestrate cellular decision-making in the presence of both signal and noise. Here we tested different topologies and verified a synthetic gene circuit with mutual inhibition and auto-activations to be quadrastable, which enables direct study of quadruple cell fate determination on an engineered landscape. We show that cells indeed gravitate towards local minima and signal inductions dictate cell fates through modulating the shape of the multistable landscape. Experiments, guided by model predictions, reveal that sequential inductions generate distinct cell fates by changing landscape in sequence and hence navigating cells to different final states. This work provides a synthetic biology framework to approach cell fate determination and suggests a landscape-based explanation of fixed induction sequences for targeted differentiation.

Original languageEnglish (US)
Article numbere23702
JournaleLife
Volume6
DOIs
StatePublished - Apr 11 2017

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Synthetic Genes
Gene Regulatory Networks
Genes
Decision making
Chemical activation
Topology
Networks (circuits)
Experiments
Synthetic Biology
Decision Making
Theoretical Models

ASJC Scopus subject areas

  • Neuroscience(all)
  • Medicine(all)
  • Immunology and Microbiology(all)
  • Biochemistry, Genetics and Molecular Biology(all)

Cite this

Engineering of a synthetic quadrastable gene network to approach Waddington landscape and cell fate determination. / Wu, Fuqing; Su, Ri Qi; Lai, Ying-Cheng; Wang, Xiao.

In: eLife, Vol. 6, e23702, 11.04.2017.

Research output: Contribution to journalArticle

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