Draft genome sequence of the filamentous cyanobacterium Leptolyngbya sp. strain Heron Island J, exhibiting chromatic acclimation

Robin Paul, Robert E. Jinkerson, Kristina Buss, Jason Steel, Remus Mohr, Wolfgang R. Hess, Min Chen, Petra Fromme

Research output: Contribution to journalArticle

9 Citations (Scopus)

Abstract

Leptolyngbya sp. strain Heron Island is a cyanobacterium exhibiting chromatic acclimation. However, this strain has strong interactions with other bacteria, making it impossible to obtain axenic cultures for sequencing. A protocol involving an analysis of tetranucleotide frequencies, G+C content, and BLAST searches has been described for separating the cyanobacterial scaffolds from those of its cooccurring bacteria.

Original languageEnglish (US)
Article numbere01166-13
JournalGenome Announcements
Volume2
Issue number1
DOIs
StatePublished - 2014

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Acclimatization
Cyanobacteria
Islands
Color
Axenic Culture
Genome
Bacteria
Base Composition

ASJC Scopus subject areas

  • Genetics
  • Molecular Biology

Cite this

Draft genome sequence of the filamentous cyanobacterium Leptolyngbya sp. strain Heron Island J, exhibiting chromatic acclimation. / Paul, Robin; Jinkerson, Robert E.; Buss, Kristina; Steel, Jason; Mohr, Remus; Hess, Wolfgang R.; Chen, Min; Fromme, Petra.

In: Genome Announcements, Vol. 2, No. 1, e01166-13, 2014.

Research output: Contribution to journalArticle

Paul, Robin ; Jinkerson, Robert E. ; Buss, Kristina ; Steel, Jason ; Mohr, Remus ; Hess, Wolfgang R. ; Chen, Min ; Fromme, Petra. / Draft genome sequence of the filamentous cyanobacterium Leptolyngbya sp. strain Heron Island J, exhibiting chromatic acclimation. In: Genome Announcements. 2014 ; Vol. 2, No. 1.
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