Diverse genomoviruses representing eight new and one known species identified in feces and nests of house finches (Haemorhous mexicanus)

Kara Schmidlin, Tuul Sepp, Anthony Khalifeh, Kendal Smith, Rafaela S. Fontenele, Kevin McGraw, Arvind Varsani

Research output: Contribution to journalArticle

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Abstract

House finches are desert birds native to Mexico and the southwestern United States of America. They are relatively well studied in terms of their diet, breeding, and migration patterns, but knowledge regarding viruses associated with these birds is limited. DNA viruses in fecal and nest samples of finches sampled in Phoenix (Arizona, USA) were identified using high-throughput sequencing. Seventy-three genomoviruses were identified, belonging to four genera: Gemycircularvirus (n = 27), Gemykibivirus (n = 41), Gemykroznavirus (n = 3) and Gemykrogvirus (n = 2). These 73 finch genomoviruses represent nine species, eight of which are novel. This study reiterates that these genomoviruses are ubiquitous in ecosystems.

Original languageEnglish (US)
JournalArchives of virology
DOIs
StatePublished - Jan 1 2019

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Finches
Feces
Birds
Southwestern United States
DNA Viruses
Mexico
Breeding
Ecosystem
Diet
Viruses

ASJC Scopus subject areas

  • Virology

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Diverse genomoviruses representing eight new and one known species identified in feces and nests of house finches (Haemorhous mexicanus). / Schmidlin, Kara; Sepp, Tuul; Khalifeh, Anthony; Smith, Kendal; Fontenele, Rafaela S.; McGraw, Kevin; Varsani, Arvind.

In: Archives of virology, 01.01.2019.

Research output: Contribution to journalArticle

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