TY - JOUR
T1 - Conformal invariants for multiply connected surfaces
T2 - Application to landmark curve-based brain morphometry analysis
AU - Shi, Jie
AU - Zhang, Wen
AU - Tang, Miao
AU - Caselli, Richard J.
AU - Wang, Yalin
N1 - Funding Information:
Data collection and sharing for this project was funded by the Alzheimer’ s Disease Neuroimaging Initiative (ADNI) (National Institutes of Health Grant U01 AG024904 ) and DOD ADNI (Department of Defense award number W81XWH-12-2-0012 ). ADNI is funded by the National Institute on Aging , the National Institute of Biomedical Imaging and Bioengineering , and through generous contributions from the following: Alzheimer’s Association ; Alzheimer’ s Drug Discovery Foundation ; BioClinica, Inc. ; Biogen Idec Inc. ; Bristol-Myers Squibb Company ; Eisai Inc. ; Elan Pharmaceuticals, Inc. ; Eli Lilly and Company ; F. Hoffmann-La Roche Ltd and its affiliated company Genentech, Inc. ; GE Healthcare ; Innogenetics, N.V. ; IXICO Ltd. ; Janssen Alzheimer Immunotherapy Research & Development, LLC. ; Johnson & Johnson Pharmaceutical Research & Development LLC. ; Medpace, Inc. ; Merck & Co., Inc. ; Meso Scale Diagnostics, LLC. ; NeuroRx Research ; Novartis Pharmaceuticals Corporation ; Pfizer Inc. ; Piramal Imaging ; Servier ; Synarc Inc. ; and Takeda Pharmaceutical Company . The Canadian Institutes of Health Research is providing funds to Rev December 5, 2013 support ADNI clinical sites in Canada. Private sector contributions are facilitated by the Foundation for the National Institutes of Health ( www.fnih.org ). The grantee organization is the Northern California Institute for Research and Education , and the study is coordinated by the Alzheimer’ s Disease Cooperative Study at the University of California, San Diego. ADNI data are disseminated by the Laboratory for Neuro Imaging at the University of Southern California.
Funding Information:
This work was partially supported by the National Institutes of Health ( R21AG043760 to JS, WZ, RJC and YW, R21AG049216 to WZ and YW, RF1AG051710 and U54EB020403 to YW, R01AG031581 and P30AG19610 to RJC) and the National Science Foundation ( DMS-1413417 to YW, IIS-1421165 to WZ and YW).
Publisher Copyright:
© 2016 Elsevier B.V.
PY - 2017/1/1
Y1 - 2017/1/1
N2 - Landmark curves were widely adopted in neuroimaging research for surface correspondence computation and quantified morphometry analysis. However, most of the landmark based morphometry studies only focused on landmark curve shape difference. Here we propose to compute a set of conformal invariant-based shape indices, which are associated with the landmark curve induced boundary lengths in the hyperbolic parameter domain. Such shape indices may be used to identify which surfaces are conformally equivalent and further quantitatively measure surface deformation. With the surface Ricci flow method, we can conformally map a multiply connected surface to the Poincaré disk. Our algorithm provides a stable method to compute the shape index values in the 2D (Poincaré Disk) parameter domain. The proposed shape indices are succinct, intrinsic and informative. Experimental results with synthetic data and 3D MRI data demonstrate that our method is invariant under isometric transformations and able to detect brain surface abnormalities. We also applied the new shape indices to analyze brain morphometry abnormalities associated with Alzheimer’ s disease (AD). We studied the baseline MRI scans of a set of healthy control and AD patients from the Alzheimer’ s Disease Neuroimaging Initiative (ADNI: 30 healthy control subjects vs. 30 AD patients). Although the lengths of the landmarks in Euclidean space, cortical surface area, and volume features did not differ between the two groups, our conformal invariant based shape indices revealed significant differences by Hotelling’ s T2 test. The novel conformal invariant shape indices may offer a new sensitive biomarker and enrich our brain imaging analysis toolset for studying diagnosis and prognosis of AD.
AB - Landmark curves were widely adopted in neuroimaging research for surface correspondence computation and quantified morphometry analysis. However, most of the landmark based morphometry studies only focused on landmark curve shape difference. Here we propose to compute a set of conformal invariant-based shape indices, which are associated with the landmark curve induced boundary lengths in the hyperbolic parameter domain. Such shape indices may be used to identify which surfaces are conformally equivalent and further quantitatively measure surface deformation. With the surface Ricci flow method, we can conformally map a multiply connected surface to the Poincaré disk. Our algorithm provides a stable method to compute the shape index values in the 2D (Poincaré Disk) parameter domain. The proposed shape indices are succinct, intrinsic and informative. Experimental results with synthetic data and 3D MRI data demonstrate that our method is invariant under isometric transformations and able to detect brain surface abnormalities. We also applied the new shape indices to analyze brain morphometry abnormalities associated with Alzheimer’ s disease (AD). We studied the baseline MRI scans of a set of healthy control and AD patients from the Alzheimer’ s Disease Neuroimaging Initiative (ADNI: 30 healthy control subjects vs. 30 AD patients). Although the lengths of the landmarks in Euclidean space, cortical surface area, and volume features did not differ between the two groups, our conformal invariant based shape indices revealed significant differences by Hotelling’ s T2 test. The novel conformal invariant shape indices may offer a new sensitive biomarker and enrich our brain imaging analysis toolset for studying diagnosis and prognosis of AD.
KW - Alzheimer's disease
KW - Brain landmark curves
KW - Conformal invariant
KW - Teichmüller shape space
UR - http://www.scopus.com/inward/record.url?scp=84987981749&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=84987981749&partnerID=8YFLogxK
U2 - 10.1016/j.media.2016.09.001
DO - 10.1016/j.media.2016.09.001
M3 - Article
C2 - 27639215
AN - SCOPUS:84987981749
SN - 1361-8415
VL - 35
SP - 517
EP - 529
JO - Medical Image Analysis
JF - Medical Image Analysis
ER -