ANK1 is up-regulated in laser captured microglia in Alzheimer’s brain; the importance of addressing cellular heterogeneity

Diego Mastroeni, Shobana Sekar, Jennifer Nolz, Elaine Delvaux, Katie Lunnon, Jonathan Mill, Winnie S. Liang, Paul Coleman

Research output: Contribution to journalArticle

12 Citations (Scopus)

Abstract

Recent epigenetic association studies have identified a new gene, ANK1, in the pathogenesis of Alzheimer’s disease (AD). Although strong associations were observed, brain homogenates were used to generate the data, introducing complications because of the range of cell types analyzed. In order to address the issue of cellular heterogeneity in homogenate samples we isolated microglial, astrocytes and neurons by laser capture microdissection from CA1 of hippocampus in the same individuals with a clinical and pathological diagnosis of AD and matched control cases. Using this unique RNAseq data set, we show that in the hippocampus, ANK1 is significantly (p<0.0001) up-regulated 4-fold in AD microglia, but not in neurons or astrocytes from the same individuals. These data provide evidence that microglia are the source of ANK1 differential expression previously identified in homogenate samples in AD.

Original languageEnglish (US)
Article numbere0177814
JournalPLoS One
Volume12
Issue number7
DOIs
StatePublished - Jul 1 2017

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neuroglia
Microglia
Alzheimer disease
lasers
Brain
Alzheimer Disease
Lasers
brain
astrocytes
hippocampus
Astrocytes
Neurons
Hippocampus
Microdissection
neurons
Laser Capture Microdissection
Epigenomics
epigenetics
pathogenesis
Genes

ASJC Scopus subject areas

  • Biochemistry, Genetics and Molecular Biology(all)
  • Agricultural and Biological Sciences(all)

Cite this

ANK1 is up-regulated in laser captured microglia in Alzheimer’s brain; the importance of addressing cellular heterogeneity. / Mastroeni, Diego; Sekar, Shobana; Nolz, Jennifer; Delvaux, Elaine; Lunnon, Katie; Mill, Jonathan; Liang, Winnie S.; Coleman, Paul.

In: PLoS One, Vol. 12, No. 7, e0177814, 01.07.2017.

Research output: Contribution to journalArticle

Mastroeni, Diego ; Sekar, Shobana ; Nolz, Jennifer ; Delvaux, Elaine ; Lunnon, Katie ; Mill, Jonathan ; Liang, Winnie S. ; Coleman, Paul. / ANK1 is up-regulated in laser captured microglia in Alzheimer’s brain; the importance of addressing cellular heterogeneity. In: PLoS One. 2017 ; Vol. 12, No. 7.
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