A new African streak virus species from Nigeria

Sunday Oluwafemi, Arvind Varsani, Adérito L. Monjane, Dionne N. Shepherd, Betty E. Owor, Edward P. Rybicki, Darren P. Martin

Research output: Contribution to journalArticle

10 Citations (Scopus)

Abstract

The African streak viruses (AfSVs) are a diverse group of mastrevirus species (family Geminiviridae) that infect a wide variety of annual and perennial grass species across the African continent and its nearby Indian Ocean islands. Six AfSV species (of which maize streak virus is the best known) have been described. Here we report the full genome sequences of eight isolates of a seventh AfSV species: Urochloa streak virus (USV), sampled from various locations in Nigeria. Despite there being good evidence of recombination in many other AfSV species, we found no convincing evidence that any of the USV sequences were either inter- or intra-species recombinants. The USV isolates, all of which appear to be variants of the same strain (their genome sequences are all more than 98% identical), share less than 69% nucleotide sequence identity with other currently described AfSV species.

Original languageEnglish (US)
Pages (from-to)1407-1410
Number of pages4
JournalArchives of Virology
Volume153
Issue number7
DOIs
StatePublished - Jul 2008
Externally publishedYes

Fingerprint

Nigeria
Viruses
Geminiviridae
Maize streak virus
Indian Ocean Islands
Genome
Poaceae
Genetic Recombination

ASJC Scopus subject areas

  • Genetics
  • Applied Microbiology and Biotechnology

Cite this

Oluwafemi, S., Varsani, A., Monjane, A. L., Shepherd, D. N., Owor, B. E., Rybicki, E. P., & Martin, D. P. (2008). A new African streak virus species from Nigeria. Archives of Virology, 153(7), 1407-1410. https://doi.org/10.1007/s00705-008-0123-9

A new African streak virus species from Nigeria. / Oluwafemi, Sunday; Varsani, Arvind; Monjane, Adérito L.; Shepherd, Dionne N.; Owor, Betty E.; Rybicki, Edward P.; Martin, Darren P.

In: Archives of Virology, Vol. 153, No. 7, 07.2008, p. 1407-1410.

Research output: Contribution to journalArticle

Oluwafemi, S, Varsani, A, Monjane, AL, Shepherd, DN, Owor, BE, Rybicki, EP & Martin, DP 2008, 'A new African streak virus species from Nigeria', Archives of Virology, vol. 153, no. 7, pp. 1407-1410. https://doi.org/10.1007/s00705-008-0123-9
Oluwafemi S, Varsani A, Monjane AL, Shepherd DN, Owor BE, Rybicki EP et al. A new African streak virus species from Nigeria. Archives of Virology. 2008 Jul;153(7):1407-1410. https://doi.org/10.1007/s00705-008-0123-9
Oluwafemi, Sunday ; Varsani, Arvind ; Monjane, Adérito L. ; Shepherd, Dionne N. ; Owor, Betty E. ; Rybicki, Edward P. ; Martin, Darren P. / A new African streak virus species from Nigeria. In: Archives of Virology. 2008 ; Vol. 153, No. 7. pp. 1407-1410.
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