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Author

  • Stuart Lindsay
Article

1,8-Naphthyridine-2,7-diamine: A potential universal reader of Watson-Crick base pairs for DNA sequencing by electron tunneling

Liang, F., Lindsay, S. & Zhang, P., Nov 21 2012, In : Organic and Biomolecular Chemistry. 10, 43, p. 8654-8659 6 p.

Research output: Contribution to journalArticle

16 Scopus citations

Antibody-unfolding and metastable-state binding in Force spectroscopy and recognition imaging

Kaur, P., Qiang-Fu, Fuhrmann, A., Ros, R., Kutner, L. O., Schneeweis, L. A., Navoa, R., Steger, K., Xie, L., Yonan, C., Abraham, R., Grace, M. J. & Lindsay, S., Jan 5 2011, In : Biophysical journal. 100, 1, p. 243-250 8 p.

Research output: Contribution to journalArticle

14 Scopus citations

Application of catalyst-free click reactions in attaching affinity molecules to tips of atomic force microscopy for detection of protein biomarkers

Senapati, S., Manna, S., Lindsay, S. & Zhang, P., Nov 26 2013, In : Langmuir. 29, 47, p. 14622-14630 9 p.

Research output: Contribution to journalArticle

24 Scopus citations
9 Scopus citations

A Y-Shaped Three-Arm Structure for Probing Bivalent Interactions between Protein Receptor-Ligand Using AFM and SPR

Senapati, S., Biswas, S., Manna, S., Ros, R., Lindsay, S. & Zhang, P., Jun 12 2018, In : Langmuir. 34, 23, p. 6930-6940 11 p.

Research output: Contribution to journalArticle

1 Scopus citations

Chemical recognition and binding kinetics in a functionalized tunnel junction

Chang, S., Huang, S., Liu, H., Zhang, P., Liang, F., Akahori, R., Li, S., Gyarfas, B., Shumway, J., Ashcroft, B., He, J. & Lindsay, S., Jun 15 2012, In : Nanotechnology. 23, 23, 235101.

Research output: Contribution to journalArticle

26 Scopus citations

Click Addition of a DNA Thread to the N-Termini of Peptides for Their Translocation through Solid-State Nanopores

Biswas, S., Song, W., Borges, C., Lindsay, S. & Zhang, P., Sep 12 2015, In : ACS Nano. 9, 10, p. 9652-9664 13 p.

Research output: Contribution to journalArticle

9 Scopus citations

Combined effect of polar substituents on the electronic flows in the carotenoid molecular wires

Zhao, Y., Lindsay, S., Jeon, S., Kim, H. J., Su, L., Lim, B. & Koo, S., Aug 12 2013, In : Chemistry - A European Journal. 19, 33, p. 10832-10835 4 p.

Research output: Contribution to journalArticle

12 Scopus citations

Comparison of Ensemble and Single Molecule Methods for Particle Characterization and Binding Analysis of a PEGylated Single-Domain Antibody

Schneeweis, L. A., Obenauer-Kutner, L., Kaur, P., Yamniuk, A. P., Tamura, J., Jaffe, N., O'Mara, B. W., Lindsay, S., Doyle, M. & Bryson, J., Dec 1 2015, In : Journal of Pharmaceutical Sciences. 104, 12, p. 4015-4024 10 p.

Research output: Contribution to journalArticle

57 Scopus citations

DNA translocating through a carbon nanotube can increase ionic current

Park, J. H., He, J., Gyarfas, B., Lindsay, S. & Krstić, P. S., Nov 16 2012, In : Nanotechnology. 23, 45, 455107.

Research output: Contribution to journalArticle

10 Scopus citations

Electronic Decay Length in a Protein Molecule

Zhang, B. & Lindsay, S., Jun 12 2019, In : Nano Letters. 19, 6, p. 4017-4022 6 p.

Research output: Contribution to journalArticle

4 Scopus citations

Electronic sensitivity of a single-walled carbon nanotube to internal electrolyte composition

Cao, D., Pang, P., Liu, H., He, J. & Lindsay, S., Mar 2 2012, In : Nanotechnology. 23, 8, 085203.

Research output: Contribution to journalArticle

5 Scopus citations

Electronic sensitivity of carbon nanotubes to internal water wetting

Cao, D., Pang, P., He, J., Luo, T., Park, J. H., Krstic, P., Nuckolls, C., Tang, J. & Lindsay, S., Apr 26 2011, In : ACS nano. 5, 4, p. 3113-3119 7 p.

Research output: Contribution to journalArticle

20 Scopus citations

Electronic signatures of all four DNA nucleosides in a tunneling gap

Chang, S., Huang, S., He, J., Liang, F., Zhang, P., Li, S., Chen, X., Sankey, O. & Lindsay, S., Mar 10 2010, In : Nano Letters. 10, 3, p. 1070-1075 6 p.

Research output: Contribution to journalArticle

127 Scopus citations

Electronic single-molecule identification of carbohydrate isomers by recognition tunnelling

Im, J. O., Biswas, S., Liu, H., Zhao, Y., Sen, S., Biswas, S., Ashcroft, B., Borges, C., Wang, X., Lindsay, S. & Zhang, P., Dec 21 2016, In : Nature communications. 7, 13868.

Research output: Contribution to journalArticle

12 Scopus citations

Electrophoretic Deformation of Individual Transfer RNA Molecules Reveals Their Identity

Henley, R. Y., Ashcroft, B. A., Farrell, I., Cooperman, B. S., Lindsay, S. & Wanunu, M., Jan 13 2016, In : Nano Letters. 16, 1, p. 138-144 7 p.

Research output: Contribution to journalArticle

15 Scopus citations

Fixed-gap tunnel junction for reading DNA nucleotides

Pang, P., Ashcroft, B. A., Song, W., Zhang, P., Biswas, S., Qing, Q., Yang, J., Nemanich, R., Bai, J., Smith, J. T., Reuter, K., Balagurusamy, V. S. K., Astier, Y., Stolovitzky, G. & Lindsay, S., Dec 23 2014, In : ACS nano. 8, 12, p. 11994-12003 10 p.

Research output: Contribution to journalArticle

30 Scopus citations

Gap distance and interactions in a molecular tunnel junction

Chang, S., He, J., Zhang, P., Gyarfas, B. & Lindsay, S., Sep 14 2011, In : Journal of the American Chemical Society. 133, 36, p. 14267-14269 3 p.

Research output: Contribution to journalArticle

29 Scopus citations

Hydrophobicity of methylated DNA as a possible mechanism for gene silencing

Kaur, P., Plochberger, B., Costa, P., Cope, S. M., Vaiana, S. & Lindsay, S., Dec 1 2012, In : Physical biology. 9, 6, 065001.

Research output: Contribution to journalArticle

20 Scopus citations

Identifying single bases in a DNA oligomer with electron tunnelling

Huang, S., He, J., Chang, S., Zhang, P., Liang, F., Li, S., Tuchband, M., Fuhrmann, A., Ros, R. & Lindsay, S., Dec 2010, In : Nature nanotechnology. 5, 12, p. 868-873 6 p.

Research output: Contribution to journalArticle

186 Scopus citations

Long lifetime of hydrogen-bonded dna basepairs by force spectroscopy

Fuhrmann, A., Getfert, S., Fu, Q., Reimann, P., Lindsay, S. & Ros, R., May 16 2012, In : Biophysical journal. 102, 10, p. 2381-2390 10 p.

Research output: Contribution to journalArticle

12 Scopus citations

Mass transport through vertically aligned large diameter MWCNTs embedded in parylene

Krishnakumar, P., Tiwari, P. B., Staples, S., Luo, T., Darici, Y., He, J. & Lindsay, S., Nov 16 2012, In : Nanotechnology. 23, 45, 455101.

Research output: Contribution to journalArticle

23 Scopus citations

Monosialoganglioside-containing nanoliposomes restore endothelial function impaired by AL amyloidosis light chain proteins

Franco, D. A., Truran, S., Weissig, V., Guzman-Villanueva, D., Karamanova, N., Senapati, S., Burciu, C., Ramirez-Alvarado, M., Blancas-Mejia, L. M., Lindsay, S., Hari, P. & Migrino, R. Q., Jun 1 2016, In : Journal of the American Heart Association. 5, 6, e003318.

Research output: Contribution to journalArticle

3 Scopus citations

On-chip isotachophoresis separation of functional DNA origami capture nanoarrays from cell lysate

Mei, Q., Johnson, R. H., Wei, X., Su, F., Liu, Y., Kelbauskas, L., Lindsay, S., Meldrum, D. & Yan, H., Oct 1 2013, In : Nano Research. 6, 10, p. 712-719 8 p.

Research output: Contribution to journalArticle

16 Scopus citations

Optical and electrical detection of single-molecule translocation through carbon nanotubes

Song, W., Pang, P., He, J. & Lindsay, S., Jan 22 2013, In : ACS nano. 7, 1, p. 689-694 6 p.

Research output: Contribution to journalArticle

24 Scopus citations

Optical modulation of molecular conductance

Battacharyya, S., Kibel, A., Kodis, G., Liddell, P. A., Gervaldo, M., Gust, D. & Lindsay, S., Jul 13 2011, In : Nano Letters. 11, 7, p. 2709-2714 6 p.

Research output: Contribution to journalArticle

57 Scopus citations

Origin of giant ionic currents in carbon nanotube channels

Pang, P., He, J., Park, J. H., Krstić, P. S. & Lindsay, S., Sep 27 2011, In : ACS nano. 5, 9, p. 7277-7283 7 p.

Research output: Contribution to journalArticle

62 Scopus citations

Palladium electrodes for molecular tunnel junctions

Chang, S., Sen, S., Zhang, P., Gyarfas, B., Ashcroft, B., Lefkowitz, S., Peng, H. & Lindsay, S., Oct 26 2012, In : Nanotechnology. 23, 42, 425202.

Research output: Contribution to journalArticle

14 Scopus citations

Physical model for recognition tunneling

Krstić, P., Ashcroft, B. & Lindsay, S., Feb 27 2015, In : Nanotechnology. 26, 8, 084001.

Research output: Contribution to journalArticle

17 Scopus citations

Recent Progress in Molecular Recognition Imaging Using Atomic Force Microscopy

Senapati, S. & Lindsay, S., Mar 15 2016, In : Accounts of Chemical Research. 49, 3, p. 503-510 8 p.

Research output: Contribution to journalArticle

39 Scopus citations

Recognition tunneling measurement of the conductance of DNA bases embedded in self-assembled monolayers

Huang, S., Chang, S., He, J., Zhang, P., Liang, F., Tuchband, M., Li, S. & Lindsay, S., Dec 9 2010, In : Journal of Physical Chemistry C. 114, 48, p. 20443-20448 6 p.

Research output: Contribution to journalArticle

19 Scopus citations

Recognition Tunneling of Canonical and Modified RNA Nucleotides for Their Identification with the Aid of Machine Learning

Im, J. O., Sen, S., Lindsay, S. & Zhang, P., Apr 15 2018, (Accepted/In press) In : ACS Nano.

Research output: Contribution to journalArticle

3 Scopus citations

Role of contacts in long-range protein conductance

Zhang, B., Song, W., Pang, P., Lai, H., Chen, Q., Zhang, P. & Lindsay, S., 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 13, p. 5886-5891 6 p.

Research output: Contribution to journalArticle

Open Access
9 Scopus citations

Single Molecule Identification and Quantification of Glycosaminoglycans Using Solid-State Nanopores

Im, J., Lindsay, S., Wang, X. & Zhang, P., Jan 1 2019, In : ACS Nano.

Research output: Contribution to journalArticle

7 Scopus citations

Single-molecule spectroscopy of amino acids and peptides by recognition tunnelling

Zhao, Y., Ashcroft, B., Zhang, P., Liu, H., Sen, S., Song, W., Im, J., Gyarfas, B., Manna, S., Biswas, S., Borges, C. & Lindsay, S., Jun 2014, In : Nature nanotechnology. 9, 6, p. 466-473 8 p.

Research output: Contribution to journalArticle

113 Scopus citations

SIR proteins create compact heterochromatin fibers

Swygert, S. G., Senapati, S., Bolukbasi, M. F., Wolfe, S. A., Lindsay, S. & Peterson, C. L., Dec 4 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 49, p. 12447-12452 6 p.

Research output: Contribution to journalArticle

2 Scopus citations

Slowing DNA translocation through a nanopore using a functionalized electrode

Krishnakumar, P., Gyarfas, B., Song, W., Sen, S., Zhang, P., Krstić, P. & Lindsay, S., Nov 26 2013, In : ACS nano. 7, 11, p. 10319-10326 8 p.

Research output: Contribution to journalArticle

37 Scopus citations

Solution-state conformation and stoichiometry of yeast Sir3 heterochromatin fibres

Swygert, S. G., Manning, B. J., Senapati, S., Kaur, P., Lindsay, S., Demeler, B. & Peterson, C. L., Aug 28 2014, In : Nature communications. 5, 4751.

Research output: Contribution to journalArticle

12 Scopus citations

Solution synthesis of ultrathin single-crystalline SNS nanoribbons for photodetectors via phase transition and surface processing

Deng, Z., Cao, D., He, J., Lin, S., Lindsay, S. & Liu, Y., Jul 24 2012, In : ACS nano. 6, 7, p. 6197-6207 11 p.

Research output: Contribution to journalArticle

141 Scopus citations

Stability of DNA origami nanoarrays in cell lysate

Mei, Q., Wei, X., Su, F., Liu, Y., Youngbull, C., Johnson, R., Lindsay, S., Yan, H. & Meldrum, D., Apr 13 2011, In : Nano Letters. 11, 4, p. 1477-1482 6 p.

Research output: Contribution to journalArticle

194 Scopus citations
21 Scopus citations

Surface modification of graphene nanopores for protein translocation

Shan, Y. P., Tiwari, P. B., Krishnakumar, P., Vlassiouk, I., Li, W. Z., Wang, X. W., Darici, Y., Lindsay, S., Wang, H. D., Smirnov, S. & He, J., Dec 13 2013, In : Nanotechnology. 24, 49, 495102.

Research output: Contribution to journalArticle

29 Scopus citations
24 Scopus citations

The promises and challenges of solid-state sequencing

Lindsay, S., Feb 1 2016, In : Nature Nanotechnology. 11, 2, p. 109-111 3 p.

Research output: Contribution to journalArticle

46 Scopus citations

The telomere binding protein trf2 induces chromatin compaction

Baker, A. M., Fu, Q., Hayward, W., Victoria, S., Pedroso, I. M., Lindsay, S. & Fletcher, T. M., 2011, In : PloS one. 6, 4, e19124.

Research output: Contribution to journalArticle

17 Scopus citations

Translocation events in a single-walled carbon nanotube

He, J., Liu, H., Pang, P., Cao, D. & Lindsay, S., Nov 17 2010, In : Journal of Physics Condensed Matter. 22, 45, 454112.

Research output: Contribution to journalArticle

14 Scopus citations

Translocation of single-stranded DNA through single-walled carbon nanotubes

Liu, H., He, J., Tang, J., Liu, H., Pang, P., Cao, D., Krstic, P., Joseph, S., Lindsay, S. & Nuckolls, C., Jan 1 2010, In : Science. 327, 5961, p. 64-67 4 p.

Research output: Contribution to journalArticle

225 Scopus citations

Universal Readers Based on Hydrogen Bonding or π-π Stacking for Identification of DNA Nucleotides in Electron Tunnel Junctions

Biswas, S., Sen, S., Im, J. O., Biswas, S., Krstic, P., Ashcroft, B., Borges, C., Zhao, Y., Lindsay, S. & Zhang, P., Dec 27 2016, In : ACS Nano. 10, 12, p. 11304-11316 13 p.

Research output: Contribution to journalArticle

8 Scopus citations
Chapter

Next-generation and future DNA sequencing technologies and metagenomics

Zhang, P., Gu, J., He, J., Gao, W., Zhang, W., Lindsay, S. & Meldrum, D., Dec 1 2011, Metagenomics and its Applications in Agriculture, Biomedicine and Environmental Studies. Nova Science Publishers, Inc., p. 79-106 28 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

3 Scopus citations