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2019
2 Citations (Scopus)

Electronic Decay Length in a Protein Molecule

Zhang, B. & Lindsay, S., Jun 12 2019, In : Nano Letters. 19, 6, p. 4017-4022 6 p.

Research output: Contribution to journalArticle

antibodies
Antibodies
Epitopes
proteins
Proteins

Engineering an Enzyme for Direct Electrical Monitoring of Activity

Zhang, B., Deng, H., Mukherjee, S., Song, W., Wang, X. & Lindsay, S., Jan 1 2019, (Accepted/In press) In : ACS nano.

Research output: Contribution to journalArticle

enzymes
Enzymes
direct current
engineering
Electrodes
4 Citations (Scopus)

Role of contacts in long-range protein conductance

Zhang, B., Song, W., Pang, P., Lai, H., Chen, Q., Zhang, P. & Lindsay, S., Jan 1 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 13, p. 5886-5891 6 p.

Research output: Contribution to journalArticle

Open Access
Electrodes
Proteins
Ebolavirus
Ligands
HIV Antibodies
1 Citation (Scopus)

Single Molecule Identification and Quantification of Glycosaminoglycans Using Solid-State Nanopores

Im, J., Lindsay, S., Wang, X. & Zhang, P., Jan 1 2019, In : ACS Nano.

Research output: Contribution to journalArticle

heparins
Nanopores
Glycosaminoglycans
solid state
Molecules
2018

A Y-Shaped Three-Arm Structure for Probing Bivalent Interactions between Protein Receptor-Ligand Using AFM and SPR

Senapati, S., Biswas, S., Manna, S., Ros, R., Lindsay, S. & Zhang, P., Jun 12 2018, In : Langmuir. 34, 23, p. 6930-6940 11 p.

Research output: Contribution to journalArticle

Streptavidin
Surface plasmon resonance
surface plasmon resonance
biotin
Atomic force microscopy
1 Citation (Scopus)

Recognition Tunneling of Canonical and Modified RNA Nucleotides for Their Identification with the Aid of Machine Learning

Im, J. O., Sen, S., Lindsay, S. & Zhang, P., Apr 15 2018, (Accepted/In press) In : ACS Nano.

Research output: Contribution to journalArticle

machine learning
nucleotides
Nucleotides
RNA
Learning systems
2 Citations (Scopus)

SIR proteins create compact heterochromatin fibers

Swygert, S. G., Senapati, S., Bolukbasi, M. F., Wolfe, S. A., Lindsay, S. & Peterson, C. L., Dec 4 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 49, p. 12447-12452 6 p.

Research output: Contribution to journalArticle

Heterochromatin
Chromatin
Proteins
Saccharomycetales
Nucleosomes
2017
6 Citations (Scopus)

Observation of giant conductance fluctuations in a protein

Zhang, B., Song, W., Pang, P., Zhao, Y., Zhang, P., Csabai, I., Vattay, G. & Lindsay, S., Dec 1 2017, In : Nano Futures. 1, 3, 035002.

Research output: Contribution to journalComment/debate

Open Access
proteins
Proteins
Molecules
electronics
molecules
2016
47 Citations (Scopus)
Confocal Microscopy
Collagen
Neoplasms
Extracellular Matrix
Cellular Microenvironment
9 Citations (Scopus)

Electronic single-molecule identification of carbohydrate isomers by recognition tunnelling

Im, J. O., Biswas, S., Liu, H., Zhao, Y., Sen, S., Biswas, S., Ashcroft, B., Borges, C., Wang, X., Lindsay, S. & Zhang, P., Dec 21 2016, In : Nature Communications. 7, 13868.

Research output: Contribution to journalArticle

carbohydrates
sugars
Sugars
Isomers
Polysaccharides
14 Citations (Scopus)

Electrophoretic Deformation of Individual Transfer RNA Molecules Reveals Their Identity

Henley, R. Y., Ashcroft, B. A., Farrell, I., Cooperman, B. S., Lindsay, S. & Wanunu, M., Jan 13 2016, In : Nano Letters. 16, 1, p. 138-144 7 p.

Research output: Contribution to journalArticle

ribonucleic acids
Transfer RNA
ribosomes
proteins
machine learning
2 Citations (Scopus)

Monosialoganglioside-containing nanoliposomes restore endothelial function impaired by AL amyloidosis light chain proteins

Franco, D. A., Truran, S., Weissig, V., Guzman-Villanueva, D., Karamanova, N., Senapati, S., Burciu, C., Ramirez-Alvarado, M., Blancas-Mejia, L. M., Lindsay, S., Hari, P. & Migrino, R. Q., Jun 1 2016, In : Journal of the American Heart Association. 5, 6, e003318.

Research output: Contribution to journalArticle

Amyloidosis
Light
Proteins
Antioxidants
Arterioles
33 Citations (Scopus)

Recent Progress in Molecular Recognition Imaging Using Atomic Force Microscopy

Senapati, S. & Lindsay, S., Mar 15 2016, In : Accounts of Chemical Research. 49, 3, p. 503-510 8 p.

Research output: Contribution to journalArticle

Molecular recognition
Atomic force microscopy
Imaging techniques
Molecules
Proteins
37 Citations (Scopus)

The promises and challenges of solid-state sequencing

Lindsay, S., Feb 1 2016, In : Nature Nanotechnology. 11, 2, p. 109-111 3 p.

Research output: Contribution to journalArticle

Nanopores
Nanotechnology
6 Citations (Scopus)

Universal Readers Based on Hydrogen Bonding or π-π Stacking for Identification of DNA Nucleotides in Electron Tunnel Junctions

Biswas, S., Sen, S., Im, J. O., Biswas, S., Krstic, P., Ashcroft, B., Borges, C., Zhao, Y., Lindsay, S. & Zhang, P., Dec 27 2016, In : ACS Nano. 10, 12, p. 11304-11316 13 p.

Research output: Contribution to journalArticle

Tunnel junctions
nucleotides
readers
Nucleotides
tunnel junctions
2015
8 Citations (Scopus)
Atomic Force Microscopy
Silicon
Scaffolds
Atomic force microscopy
Arm
7 Citations (Scopus)

Click Addition of a DNA Thread to the N-Termini of Peptides for Their Translocation through Solid-State Nanopores

Biswas, S., Song, W., Borges, C., Lindsay, S. & Zhang, P., Sep 12 2015, In : ACS Nano. 9, 10, p. 9652-9664 13 p.

Research output: Contribution to journalArticle

Nanopores
threads
Peptides
peptides
DNA

Comparison of Ensemble and Single Molecule Methods for Particle Characterization and Binding Analysis of a PEGylated Single-Domain Antibody

Schneeweis, L. A., Obenauer-Kutner, L., Kaur, P., Yamniuk, A. P., Tamura, J., Jaffe, N., O'Mara, B. W., Lindsay, S., Doyle, M. & Bryson, J., Dec 1 2015, In : Journal of Pharmaceutical Sciences. 104, 12, p. 4015-4024 10 p.

Research output: Contribution to journalArticle

Single-Domain Antibodies
Atomic Force Microscopy
Surface Plasmon Resonance
Calorimetry
Hydrodynamics
16 Citations (Scopus)

Physical model for recognition tunneling

Krstić, P., Ashcroft, B. & Lindsay, S., Feb 27 2015, In : Nanotechnology. 26, 8, 084001.

Research output: Contribution to journalArticle

Molecules
DNA
Atoms
Electrodes
Bond length
1 Citation (Scopus)

Single-molecule nanoelectronics

Lindsay, S., Jan 1 2015, Nanoelectrochemistry. CRC Press, p. 181-204 24 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Nanoelectronics
Molecular electronics
Molecules
Electronics industry
Computer circuits

What happens when molecules meet nanostructures: The convergence of chemistry and electronics at the nanoscale

Lindsay, S., Aug 26 2015, Nanoscale Materials and Devices for Electronics, Photonics and Solar Energy. Springer International Publishing, p. 217-235 19 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Nanostructures
Electronic equipment
chemistry
Molecules
sensors
2014
29 Citations (Scopus)

Fixed-gap tunnel junction for reading DNA nucleotides

Pang, P., Ashcroft, B. A., Song, W., Zhang, P., Biswas, S., Qing, Q., Yang, J., Nemanich, R., Bai, J., Smith, J. T., Reuter, K., Balagurusamy, V. S. K., Astier, Y., Stolovitzky, G. & Lindsay, S., Dec 23 2014, In : ACS Nano. 8, 12, p. 11994-12003 10 p.

Research output: Contribution to journalArticle

Tunnel junctions
nucleotides
Nucleotides
tunnel junctions
DNA
98 Citations (Scopus)

Single-molecule spectroscopy of amino acids and peptides by recognition tunnelling

Zhao, Y., Ashcroft, B., Zhang, P., Liu, H., Sen, S., Song, W., Im, J., Gyarfas, B., Manna, S., Biswas, S., Borges, C. & Lindsay, S., 2014, In : Nature Nanotechnology. 9, 6, p. 466-473 8 p.

Research output: Contribution to journalArticle

Peptides
peptides
amino acids
Amino acids
Spectroscopy
12 Citations (Scopus)

Solution-state conformation and stoichiometry of yeast Sir3 heterochromatin fibres

Swygert, S. G., Manning, B. J., Senapati, S., Kaur, P., Lindsay, S., Demeler, B. & Peterson, C. L., Aug 28 2014, In : Nature Communications. 5, 4751.

Research output: Contribution to journalArticle

Heterochromatin
yeast
Stoichiometry
Yeast
Conformations
2013
22 Citations (Scopus)

Application of catalyst-free click reactions in attaching affinity molecules to tips of atomic force microscopy for detection of protein biomarkers

Senapati, S., Manna, S., Lindsay, S. & Zhang, P., Nov 26 2013, In : Langmuir. 29, 47, p. 14622-14630 9 p.

Research output: Contribution to journalArticle

biomarkers
Biomarkers
affinity
Atomic force microscopy
atomic force microscopy
11 Citations (Scopus)

Combined effect of polar substituents on the electronic flows in the carotenoid molecular wires

Zhao, Y., Lindsay, S., Jeon, S., Kim, H. J., Su, L., Lim, B. & Koo, S., Aug 12 2013, In : Chemistry - A European Journal. 19, 33, p. 10832-10835 4 p.

Research output: Contribution to journalArticle

Carotenoids
Wire
Electrons
Modulators
Tuning
16 Citations (Scopus)

On-chip isotachophoresis separation of functional DNA origami capture nanoarrays from cell lysate

Mei, Q., Johnson, R. H., Wei, X., Su, F., Liu, Y., Kelbauskas, L., Lindsay, S., Meldrum, D. & Yan, H., Oct 2013, In : Nano Research. 6, 10, p. 712-719 8 p.

Research output: Contribution to journalArticle

DNA
Thrombin
Nanostructures
Structural integrity
Fused silica
24 Citations (Scopus)

Optical and electrical detection of single-molecule translocation through carbon nanotubes

Song, W., Pang, P., He, J. & Lindsay, S., Jan 22 2013, In : ACS Nano. 7, 1, p. 689-694 6 p.

Research output: Contribution to journalArticle

Carbon Nanotubes
Single-walled carbon nanotubes (SWCN)
Carbon nanotubes
carbon nanotubes
ion currents
35 Citations (Scopus)

Slowing DNA translocation through a nanopore using a functionalized electrode

Krishnakumar, P., Gyarfas, B., Song, W., Sen, S., Zhang, P., Krstić, P. & Lindsay, S., Nov 26 2013, In : ACS Nano. 7, 11, p. 10319-10326 8 p.

Research output: Contribution to journalArticle

Nanopores
Single-Stranded DNA
Monolayers
Hydrogen bonds
DNA
24 Citations (Scopus)

Surface modification of graphene nanopores for protein translocation

Shan, Y. P., Tiwari, P. B., Krishnakumar, P., Vlassiouk, I., Li, W. Z., Wang, X. W., Darici, Y., Lindsay, S., Wang, H. D., Smirnov, S. & He, J., Dec 13 2013, In : Nanotechnology. 24, 49, 495102.

Research output: Contribution to journalArticle

Nanopores
Graphite
Graphene
Surface treatment
Ferritins
2012
15 Citations (Scopus)

1,8-Naphthyridine-2,7-diamine: A potential universal reader of Watson-Crick base pairs for DNA sequencing by electron tunneling

Liang, F., Lindsay, S. & Zhang, P., Nov 21 2012, In : Organic and Biomolecular Chemistry. 10, 43, p. 8654-8659 6 p.

Research output: Contribution to journalArticle

Electron tunneling
sequencing
readers
diamines
electron tunneling
13 Citations (Scopus)

Biochemistry and semiconductor electronicsthe next big hit for silicon?

Lindsay, S., Apr 25 2012, In : Journal of Physics Condensed Matter. 24, 16, 164201.

Research output: Contribution to journalArticle

Precision Medicine
biochemistry
Semiconductors
Biochemistry
Social Responsibility
26 Citations (Scopus)

Chemical recognition and binding kinetics in a functionalized tunnel junction

Chang, S., Huang, S., Liu, H., Zhang, P., Liang, F., Akahori, R., Li, S., Gyarfas, B., Shumway, J., Ashcroft, B., He, J. & Lindsay, S., Jun 15 2012, In : Nanotechnology. 23, 23, 235101.

Research output: Contribution to journalArticle

Tunnel junctions
Molecules
Kinetics
DNA
Cytosine
9 Citations (Scopus)

DNA translocating through a carbon nanotube can increase ionic current

Park, J. H., He, J., Gyarfas, B., Lindsay, S. & Krstić, P. S., Nov 16 2012, In : Nanotechnology. 23, 45, 455107.

Research output: Contribution to journalArticle

Carbon Nanotubes
Carbon nanotubes
DNA
Ions
Single-walled carbon nanotubes (SWCN)
5 Citations (Scopus)

Electronic sensitivity of a single-walled carbon nanotube to internal electrolyte composition

Cao, D., Pang, P., Liu, H., He, J. & Lindsay, S., Mar 2 2012, In : Nanotechnology. 23, 8, 085203.

Research output: Contribution to journalArticle

Carbon Nanotubes
Single-walled carbon nanotubes (SWCN)
Electrolytes
Carbon nanotubes
Chemical analysis
18 Citations (Scopus)

Hydrophobicity of methylated DNA as a possible mechanism for gene silencing

Kaur, P., Plochberger, B., Costa, P., Cope, S. M., Vaiana, S. & Lindsay, S., Dec 2012, In : Physical Biology. 9, 6, 065001.

Research output: Contribution to journalArticle

Gene Silencing
Hydrophobic and Hydrophilic Interactions
DNA
Chromatin
Water
14 Citations (Scopus)

Insulated gold scanning tunneling microscopy probes for recognition tunneling in an aqueous environment

Tuchband, M., He, J., Huang, S. & Lindsay, S., Jan 2012, In : Review of Scientific Instruments. 83, 1, 015102.

Research output: Contribution to journalArticle

Scanning Tunnelling Microscopy
Scanning tunneling microscopy
Polyethylene
Sulfhydryl Compounds
Gold
12 Citations (Scopus)

Long lifetime of hydrogen-bonded dna basepairs by force spectroscopy

Fuhrmann, A., Getfert, S., Fu, Q., Reimann, P., Lindsay, S. & Ros, R., May 16 2012, In : Biophysical Journal. 102, 10, p. 2381-2390 10 p.

Research output: Contribution to journalArticle

Hydrogen
Spectrum Analysis
Protons
Thymine
DNA
20 Citations (Scopus)

Mass transport through vertically aligned large diameter MWCNTs embedded in parylene

Krishnakumar, P., Tiwari, P. B., Staples, S., Luo, T., Darici, Y., He, J. & Lindsay, S., Nov 16 2012, In : Nanotechnology. 23, 45, 455101.

Research output: Contribution to journalArticle

Mass transfer
Electric fields
Charged particles
Membranes
Oligomers
14 Citations (Scopus)

Palladium electrodes for molecular tunnel junctions

Chang, S., Sen, S., Zhang, P., Gyarfas, B., Ashcroft, B., Lefkowitz, S., Peng, H. & Lindsay, S., Oct 26 2012, In : Nanotechnology. 23, 42, 425202.

Research output: Contribution to journalArticle

Tunnel junctions
Palladium
Silicon
Metals
Electrodes
124 Citations (Scopus)

Solution synthesis of ultrathin single-crystalline SNS nanoribbons for photodetectors via phase transition and surface processing

Deng, Z., Cao, D., He, J., Lin, S., Lindsay, S. & Liu, Y., Jul 24 2012, In : ACS Nano. 6, 7, p. 6197-6207 11 p.

Research output: Contribution to journalArticle

Nanoribbons
Carbon Nanotubes
Photodetectors
photometers
Phase transitions
23 Citations (Scopus)
Hydrogen bonds
DNA
Nuclear magnetic resonance
Molecular recognition
Nanopores
2011
14 Citations (Scopus)

Antibody-unfolding and metastable-state binding in Force spectroscopy and recognition imaging

Kaur, P., Qiang-Fu, Fuhrmann, A., Ros, R., Kutner, L. O., Schneeweis, L. A., Navoa, R., Steger, K., Xie, L., Yonan, C., Abraham, R., Grace, M. J. & Lindsay, S., Jan 5 2011, In : Biophysical Journal. 100, 1, p. 243-250 8 p.

Research output: Contribution to journalArticle

Spectrum Analysis
Antibodies
Surface Plasmon Resonance
Atomic Force Microscopy
Noise
20 Citations (Scopus)

Electronic sensitivity of carbon nanotubes to internal water wetting

Cao, D., Pang, P., He, J., Luo, T., Park, J. H., Krstic, P., Nuckolls, C., Tang, J. & Lindsay, S., Apr 26 2011, In : ACS Nano. 5, 4, p. 3113-3119 7 p.

Research output: Contribution to journalArticle

Carbon Nanotubes
Single-walled carbon nanotubes (SWCN)
wetting
Wetting
Carbon nanotubes
28 Citations (Scopus)

Gap distance and interactions in a molecular tunnel junction

Chang, S., He, J., Zhang, P., Gyarfas, B. & Lindsay, S., Sep 14 2011, In : Journal of the American Chemical Society. 133, 36, p. 14267-14269 3 p.

Research output: Contribution to journalArticle

Tunnel junctions
Electrodes
Surface Tension
DNA sequences
Reading
3 Citations (Scopus)

Next-generation and future DNA sequencing technologies and metagenomics

Zhang, P., Gu, J., He, J., Gao, W., Zhang, W., Lindsay, S. & Meldrum, D., 2011, Metagenomics and its Applications in Agriculture, Biomedicine and Environmental Studies. Nova Science Publishers, Inc., p. 79-106 28 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Metagenomics
Social Responsibility
DNA Sequence Analysis
Technology
DNA
56 Citations (Scopus)

Optical modulation of molecular conductance

Battacharyya, S., Kibel, A., Kodis, G., Liddell, P. A., Gervaldo, M., Gust, D. & Lindsay, S., Jul 13 2011, In : Nano Letters. 11, 7, p. 2709-2714 6 p.

Research output: Contribution to journalArticle

Light modulation
light modulation
Molecules
molecules
Fullerenes
57 Citations (Scopus)

Origin of giant ionic currents in carbon nanotube channels

Pang, P., He, J., Park, J. H., Krstić, P. S. & Lindsay, S., Sep 27 2011, In : ACS Nano. 5, 9, p. 7277-7283 7 p.

Research output: Contribution to journalArticle

Carbon Nanotubes
Electrolytes
Cations
Carbon nanotubes
Positive ions
169 Citations (Scopus)

Stability of DNA origami nanoarrays in cell lysate

Mei, Q., Wei, X., Su, F., Liu, Y., Youngbull, C., Johnson, R., Lindsay, S., Yan, H. & Meldrum, D., Apr 13 2011, In : Nano Letters. 11, 4, p. 1477-1482 6 p.

Research output: Contribution to journalArticle

DNA
deoxyribonucleic acid
cells
Nanostructures
platforms
19 Citations (Scopus)
salmonella
bacteriophages
Bacteriophages
Salmonella
viruses