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• 2020

  Electronic Conductance Resonance in Non-Redox-Active Proteins

  Zhang, B., Song, W., Brown, J., Nemanich, R. & Lindsay, S., Apr 1 2020, In: Journal of the American Chemical Society. 142, 13, p. 6432-6438 7 p.

  Research output: Contribution to journal › Article › peer-review

  • Proteins
  • Oxidation-Reduction
  • Biological Transport
  • Electrons
  • Electron injection
  4 Scopus citations

• Engineering an Enzyme for Direct Electrical Monitoring of Activity

  Zhang, B., Deng, H., Mukherjee, S., Song, W., Wang, X. & Lindsay, S., Feb 25 2020, In: ACS nano. 14, 2, p. 1360-1368 9 p.

  Research output: Contribution to journal › Article › peer-review

  • Enzymes
  • enzymes
  • direct current
  • Electrodes
  • engineering
  3 Scopus citations

• Nongjian Tao (1963-2020)

  Hihath, J. & Lindsay, S., May 1 2020, In: Nature nanotechnology. 15, 5, 1 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  1 Scopus citations

• Ubiquitous electron transport in non-electron transfer proteins

  Lindsay, S., May 2020, In: Life. 10, 5, 72.

  Research output: Contribution to journal › Review article › peer-review

  Open Access

  • Electron Transport
  • electron transfer
  • proteins
  • protein
  • electron
• 2019

  Electronic Decay Length in a Protein Molecule

  Zhang, B. & Lindsay, S., Jun 12 2019, In: Nano Letters. 19, 6, p. 4017-4022 6 p.

  Research output: Contribution to journal › Article › peer-review

  • Antibodies
  • antibodies
  • Epitopes
  • Molecules
  • Proteins
  6 Scopus citations

• Role of contacts in long-range protein conductance

  Zhang, B., Song, W., Pang, P., Lai, H., Chen, Q., Zhang, P. & Lindsay, S., 2019, In: Proceedings of the National Academy of Sciences of the United States of America. 116, 13, p. 5886-5891 6 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Electrodes
  • Proteins
  • Electric Conductivity
  • Ligands
  • Ions
  15 Scopus citations

• Single molecule identification and quantification of glycosaminoglycans using solid-state nanopores

  Im, J., Lindsay, S., Wang, X. & Zhang, P., Jun 25 2019, In: ACS nano. 13, 6, p. 6308-6318 11 p.

  Research output: Contribution to journal › Article › peer-review

  • Glycosaminoglycans
  • heparins
  • Nanopores
  • Heparin
  • Molecules
  10 Scopus citations
• 2018

  A Y-Shaped Three-Arm Structure for Probing Bivalent Interactions between Protein Receptor-Ligand Using AFM and SPR

  Senapati, S., Biswas, S., Manna, S., Ros, R., Lindsay, S. & Zhang, P., Jun 12 2018, In: Langmuir. 34, 23, p. 6930-6940 11 p.

  Research output: Contribution to journal › Article › peer-review

  • Surface plasmon resonance
  • Ligands
  • Biotin
  • Streptavidin
  • Atomic force microscopy
  2 Scopus citations

• Recognition Tunneling of Canonical and Modified RNA Nucleotides for Their Identification with the Aid of Machine Learning

  Im, J. O., Sen, S., Lindsay, S. & Zhang, P., Apr 15 2018, (Accepted/In press) In: ACS Nano.

  Research output: Contribution to journal › Article › peer-review

  • machine learning
  • nucleotides
  • Nucleotides
  • RNA
  • Machine learning
  6 Scopus citations

• SIR proteins create compact heterochromatin fibers

  Swygert, S. G., Senapati, S., Bolukbasi, M. F., Wolfe, S. A., Lindsay, S. & Peterson, C. L., Dec 4 2018, In: Proceedings of the National Academy of Sciences of the United States of America. 115, 49, p. 12447-12452 6 p.

  Research output: Contribution to journal › Article › peer-review

  • Heterochromatin
  • Chromatin
  • Proteins
  • Complement System Proteins
  • Atomic Force Microscopy
  2 Scopus citations
• 2017

  Observation of giant conductance fluctuations in a protein

  Zhang, B., Song, W., Pang, P., Zhao, Y., Zhang, P., Csabai, I., Vattay, G. & Lindsay, S., Dec 2017, In: Nano Futures. 1, 3, 035002.

  Research output: Contribution to journal › Comment/debate › peer-review

  Open Access

  • Proteins
  • proteins
  • Molecules
  • Ligands
  • molecules
  14 Scopus citations
• 2016

  Correlating confocal microscopy and atomic force indentation reveals metastatic cancer cells stiffen during invasion into collagen i matrices

  Staunton, J. R., Doss, B. L., Lindsay, S. & Ros, R., Jan 27 2016, In: Scientific reports. 6, 19686.

  Research output: Contribution to journal › Article › peer-review

  • Confocal Microscopy
  • Collagen
  • Neoplasms
  • Extracellular Matrix
  • Cellular Microenvironment
  68 Scopus citations

• Electronic single-molecule identification of carbohydrate isomers by recognition tunnelling

  Im, J. O., Biswas, S., Liu, H., Zhao, Y., Sen, S., Biswas, S., Ashcroft, B., Borges, C., Wang, X., Lindsay, S. & Zhang, P., Dec 21 2016, In: Nature communications. 7, 13868.

  Research output: Contribution to journal › Article › peer-review

  • Isomers
  • carbohydrates
  • sugars
  • isomers
  • Molecules
  16 Scopus citations

• Electrophoretic Deformation of Individual Transfer RNA Molecules Reveals Their Identity

  Henley, R. Y., Ashcroft, B. A., Farrell, I., Cooperman, B. S., Lindsay, S. & Wanunu, M., Jan 13 2016, In: Nano Letters. 16, 1, p. 138-144 7 p.

  Research output: Contribution to journal › Article › peer-review

  • Transfer RNA
  • ribonucleic acids
  • Molecules
  • proteins
  • ribosomes
  19 Scopus citations

• Monosialoganglioside-containing nanoliposomes restore endothelial function impaired by AL amyloidosis light chain proteins

  Franco, D. A., Truran, S., Weissig, V., Guzman-Villanueva, D., Karamanova, N., Senapati, S., Burciu, C., Ramirez-Alvarado, M., Blancas-Mejia, L. M., Lindsay, S., Hari, P. & Migrino, R. Q., Jun 1 2016, In: Journal of the American Heart Association. 5, 6, e003318.

  Research output: Contribution to journal › Article › peer-review

  • sialogangliosides
  • Amyloidosis
  • Light
  • Proteins
  • Antioxidants
  3 Scopus citations

• Recent Progress in Molecular Recognition Imaging Using Atomic Force Microscopy

  Senapati, S. & Lindsay, S., Mar 15 2016, In: Accounts of Chemical Research. 49, 3, p. 503-510 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Molecular recognition
  • Atomic force microscopy
  • Imaging techniques
  • Molecules
  • Proteins
  41 Scopus citations

• The promises and challenges of solid-state sequencing

  Lindsay, S., Feb 1 2016, In: Nature nanotechnology. 11, 2, p. 109-111 3 p.

  Research output: Contribution to journal › Comment/debate › peer-review
  52 Scopus citations

• Universal Readers Based on Hydrogen Bonding or π-π Stacking for Identification of DNA Nucleotides in Electron Tunnel Junctions

  Biswas, S., Sen, S., Im, J. O., Biswas, S., Krstic, P., Ashcroft, B., Borges, C., Zhao, Y., Lindsay, S. & Zhang, P., Dec 27 2016, In: ACS Nano. 10, 12, p. 11304-11316 13 p.

  Research output: Contribution to journal › Article › peer-review

  • Tunnel junctions
  • Hydrogen bonds
  • nucleotides
  • Nucleotides
  • readers
  10 Scopus citations
• 2015

  A Three-Arm Scaffold Carrying Affinity Molecules for Multiplex Recognition Imaging by Atomic Force Microscopy: The Synthesis, Attachment to Silicon Tips, and Detection of Proteins

  Manna, S., Senapati, S., Lindsay, S. & Zhang, P., Jun 17 2015, In: Journal of the American Chemical Society. 137, 23, p. 7415-7423 9 p.

  Research output: Contribution to journal › Article › peer-review

  • Atomic force microscopy
  • Atomic Force Microscopy
  • Silicon
  • Scaffolds
  • Molecules
  9 Scopus citations

• Click Addition of a DNA Thread to the N-Termini of Peptides for Their Translocation through Solid-State Nanopores

  Biswas, S., Song, W., Borges, C., Lindsay, S. & Zhang, P., Sep 12 2015, In: ACS nano. 9, 10, p. 9652-9664 13 p.

  Research output: Contribution to journal › Article › peer-review

  • Nanopores
  • Peptides
  • threads
  • peptides
  • DNA
  11 Scopus citations

• Comparison of Ensemble and Single Molecule Methods for Particle Characterization and Binding Analysis of a PEGylated Single-Domain Antibody

  Schneeweis, L. A., Obenauer-Kutner, L., Kaur, P., Yamniuk, A. P., Tamura, J., Jaffe, N., O'Mara, B. W., Lindsay, S., Doyle, M. & Bryson, J., Dec 1 2015, In: Journal of Pharmaceutical Sciences. 104, 12, p. 4015-4024 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Single-Domain Antibodies
  • Polyethylene Glycols
  • Atomic Force Microscopy
  • Surface Plasmon Resonance
  • Calorimetry

• Physical model for recognition tunneling

  Krstić, P., Ashcroft, B. & Lindsay, S., Feb 27 2015, In: Nanotechnology. 26, 8, 084001.

  Research output: Contribution to journal › Article › peer-review

  • Molecules
  • Atoms
  • DNA
  • Electrodes
  • Bond length
  19 Scopus citations

• Single-molecule nanoelectronics

  Lindsay, S., Jan 1 2015, Nanoelectrochemistry. CRC Press, p. 181-204 24 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Nanoelectronics
  • Molecular electronics
  • Molecules
  • Electronics industry
  • Doping (additives)
  1 Scopus citations

• What happens when molecules meet nanostructures: The convergence of chemistry and electronics at the nanoscale

  Lindsay, S., Aug 26 2015, Nanoscale Materials and Devices for Electronics, Photonics and Solar Energy. Springer International Publishing, p. 217-235 19 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Nanostructures
  • Molecules
  • chemistry
  • Electronic equipment
  • sensors
• 2014

  Fixed-gap tunnel junction for reading DNA nucleotides

  Pang, P., Ashcroft, B. A., Song, W., Zhang, P., Biswas, S., Qing, Q., Yang, J., Nemanich, R., Bai, J., Smith, J. T., Reuter, K., Balagurusamy, V. S. K., Astier, Y., Stolovitzky, G. & Lindsay, S., Dec 23 2014, In: ACS nano. 8, 12, p. 11994-12003 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Tunnel junctions
  • nucleotides
  • Nucleotides
  • DNA
  • tunnel junctions
  32 Scopus citations

• Single-molecule spectroscopy of amino acids and peptides by recognition tunnelling

  Zhao, Y., Ashcroft, B., Zhang, P., Liu, H., Sen, S., Song, W., Im, J., Gyarfas, B., Manna, S., Biswas, S., Borges, C. & Lindsay, S., Jun 2014, In: Nature nanotechnology. 9, 6, p. 466-473 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Peptides
  • Amino acids
  • amino acids
  • Spectroscopy
  • peptides
  127 Scopus citations

• Solution-state conformation and stoichiometry of yeast Sir3 heterochromatin fibres

  Swygert, S. G., Manning, B. J., Senapati, S., Kaur, P., Lindsay, S., Demeler, B. & Peterson, C. L., Aug 28 2014, In: Nature communications. 5, 4751.

  Research output: Contribution to journal › Article › peer-review

  • Stoichiometry
  • Conformations
  • Heterochromatin
  • yeast
  • Yeast
  12 Scopus citations
• 2013

  Application of catalyst-free click reactions in attaching affinity molecules to tips of atomic force microscopy for detection of protein biomarkers

  Senapati, S., Manna, S., Lindsay, S. & Zhang, P., Nov 26 2013, In: Langmuir. 29, 47, p. 14622-14630 9 p.

  Research output: Contribution to journal › Article › peer-review

  • biomarkers
  • Atomic force microscopy
  • Biomarkers
  • affinity
  • Molecules
  24 Scopus citations

• Combined effect of polar substituents on the electronic flows in the carotenoid molecular wires

  Zhao, Y., Lindsay, S., Jeon, S., Kim, H. J., Su, L., Lim, B. & Koo, S., Aug 12 2013, In: Chemistry - A European Journal. 19, 33, p. 10832-10835 4 p.

  Research output: Contribution to journal › Article › peer-review

  • Carotenoids
  • Electrons
  • Wire
  • Modulators
  • Tuning
  12 Scopus citations

• On-chip isotachophoresis separation of functional DNA origami capture nanoarrays from cell lysate

  Mei, Q., Johnson, R. H., Wei, X., Su, F., Liu, Y., Kelbauskas, L., Lindsay, S., Meldrum, D. & Yan, H., Oct 1 2013, In: Nano Research. 6, 10, p. 712-719 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Isotachophoresis
  • DNA
  • Thrombin
  • Nanostructures
  • Fused silica
  16 Scopus citations

• Optical and electrical detection of single-molecule translocation through carbon nanotubes

  Song, W., Pang, P., He, J. & Lindsay, S., Jan 22 2013, In: ACS nano. 7, 1, p. 689-694 6 p.

  Research output: Contribution to journal › Article › peer-review

  • Carbon Nanotubes
  • Single-walled carbon nanotubes (SWCN)
  • Molecules
  • Fluorescence
  • carbon nanotubes
  25 Scopus citations

• Slowing DNA translocation through a nanopore using a functionalized electrode

  Krishnakumar, P., Gyarfas, B., Song, W., Sen, S., Zhang, P., Krstić, P. & Lindsay, S., Nov 26 2013, In: ACS nano. 7, 11, p. 10319-10326 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Nanopores
  • Hydrogen bonds
  • Monolayers
  • Single-Stranded DNA
  • DNA
  38 Scopus citations

• Surface modification of graphene nanopores for protein translocation

  Shan, Y. P., Tiwari, P. B., Krishnakumar, P., Vlassiouk, I., Li, W. Z., Wang, X. W., Darici, Y., Lindsay, S., Wang, H. D., Smirnov, S. & He, J., Dec 13 2013, In: Nanotechnology. 24, 49, 495102.

  Research output: Contribution to journal › Article › peer-review

  • Nanopores
  • Graphite
  • Surface treatment
  • Proteins
  • DPPE-PEG2000
  33 Scopus citations
• 2012

  1,8-Naphthyridine-2,7-diamine: A potential universal reader of Watson-Crick base pairs for DNA sequencing by electron tunneling

  Liang, F., Lindsay, S. & Zhang, P., Nov 21 2012, In: Organic and Biomolecular Chemistry. 10, 43, p. 8654-8659 6 p.

  Research output: Contribution to journal › Article › peer-review

  • Electron tunneling
  • sequencing
  • diamines
  • readers
  • electron tunneling
  16 Scopus citations

• Biochemistry and semiconductor electronicsthe next big hit for silicon?

  Lindsay, S., Apr 25 2012, In: Journal of Physics Condensed Matter. 24, 16, 164201.

  Research output: Contribution to journal › Review article › peer-review

  • Biochemistry
  • Semiconductors
  • Biomolecules
  • biochemistry
  • Silicon
  13 Scopus citations

• Chemical recognition and binding kinetics in a functionalized tunnel junction

  Chang, S., Huang, S., Liu, H., Zhang, P., Liang, F., Akahori, R., Li, S., Gyarfas, B., Shumway, J., Ashcroft, B., He, J. & Lindsay, S., Jun 15 2012, In: Nanotechnology. 23, 23, 235101.

  Research output: Contribution to journal › Article › peer-review

  • Tunnel junctions
  • Molecules
  • DNA
  • Oligomers
  • Hydrogen bonds
  27 Scopus citations

• DNA translocating through a carbon nanotube can increase ionic current

  Park, J. H., He, J., Gyarfas, B., Lindsay, S. & Krstić, P. S., Nov 16 2012, In: Nanotechnology. 23, 45, 455107.

  Research output: Contribution to journal › Article › peer-review

  • Carbon Nanotubes
  • DNA
  • Ions
  • Single-walled carbon nanotubes (SWCN)
  • Molecular dynamics
  10 Scopus citations

• Electronic sensitivity of a single-walled carbon nanotube to internal electrolyte composition

  Cao, D., Pang, P., Liu, H., He, J. & Lindsay, S., Mar 2 2012, In: Nanotechnology. 23, 8, 085203.

  Research output: Contribution to journal › Article › peer-review

  • Single-walled carbon nanotubes (SWCN)
  • Carbon Nanotubes
  • Electrolytes
  • Chemical analysis
  • Nanofluidics
  5 Scopus citations

• Hydrophobicity of methylated DNA as a possible mechanism for gene silencing

  Kaur, P., Plochberger, B., Costa, P., Cope, S. M., Vaiana, S. & Lindsay, S., Dec 2012, In: Physical biology. 9, 6, 065001.

  Research output: Contribution to journal › Article › peer-review

  • Hydrophobic and Hydrophilic Interactions
  • Gene Silencing
  • DNA
  • Chromatin
  • Dynamic Light Scattering
  22 Scopus citations

• Insulated gold scanning tunneling microscopy probes for recognition tunneling in an aqueous environment

  Tuchband, M., He, J., Huang, S. & Lindsay, S., Jan 2012, In: Review of Scientific Instruments. 83, 1, 015102.

  Research output: Contribution to journal › Review article › peer-review

  • Scanning Tunnelling Microscopy
  • Scanning tunneling microscopy
  • Polyethylene
  • Sulfhydryl Compounds
  • Gold
  20 Scopus citations

• Long lifetime of hydrogen-bonded dna basepairs by force spectroscopy

  Fuhrmann, A., Getfert, S., Fu, Q., Reimann, P., Lindsay, S. & Ros, R., May 16 2012, In: Biophysical journal. 102, 10, p. 2381-2390 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Hydrogen
  • Spectrum Analysis
  • Protons
  • Thymine
  • DNA
  14 Scopus citations

• Mass transport through vertically aligned large diameter MWCNTs embedded in parylene

  Krishnakumar, P., Tiwari, P. B., Staples, S., Luo, T., Darici, Y., He, J. & Lindsay, S., Nov 16 2012, In: Nanotechnology. 23, 45, 455101.

  Research output: Contribution to journal › Article › peer-review

  • parylene
  • Gold nanoparticles
  • Oligomers
  • Charged particles
  • Electric fields
  24 Scopus citations

• Palladium electrodes for molecular tunnel junctions

  Chang, S., Sen, S., Zhang, P., Gyarfas, B., Ashcroft, B., Lefkowitz, S., Peng, H. & Lindsay, S., Oct 26 2012, In: Nanotechnology. 23, 42, 425202.

  Research output: Contribution to journal › Article › peer-review

  • Palladium
  • Tunnel junctions
  • Silicon
  • Metals
  • Electrodes
  14 Scopus citations

• Solution synthesis of ultrathin single-crystalline SNS nanoribbons for photodetectors via phase transition and surface processing

  Deng, Z., Cao, D., He, J., Lin, S., Lindsay, S. & Liu, Y., Jul 24 2012, In: ACS nano. 6, 7, p. 6197-6207 11 p.

  Research output: Contribution to journal › Article › peer-review

  • Nanoribbons
  • Carbon Nanotubes
  • Photodetectors
  • Crystalline materials
  • Phase transitions
  146 Scopus citations

• Synthesis, physicochemical properties, and hydrogen bonding of 4(5)-substituted 1-H-imidazole-2-carboxamide, a potential universal reader for DNA sequencing by recognition tunneling

  Liang, F., Li, S., Lindsay, S. & Zhang, P., May 7 2012, In: Chemistry - A European Journal. 18, 19, p. 5998-6007 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Hydrogen bonds
  • Physicochemical properties
  • imidazole
  • DNA
  • Nuclear magnetic resonance
  24 Scopus citations
• 2011

  Antibody-unfolding and metastable-state binding in Force spectroscopy and recognition imaging

  Kaur, P., Qiang-Fu, Fuhrmann, A., Ros, R., Kutner, L. O., Schneeweis, L. A., Navoa, R., Steger, K., Xie, L., Yonan, C., Abraham, R., Grace, M. J. & Lindsay, S., Jan 5 2011, In: Biophysical journal. 100, 1, p. 243-250 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Spectrum Analysis
  • Antibodies
  • Surface Plasmon Resonance
  • Atomic Force Microscopy
  • Noise
  14 Scopus citations

• Electronic sensitivity of carbon nanotubes to internal water wetting

  Cao, D., Pang, P., He, J., Luo, T., Park, J. H., Krstic, P., Nuckolls, C., Tang, J. & Lindsay, S., Apr 26 2011, In: ACS nano. 5, 4, p. 3113-3119 7 p.

  Research output: Contribution to journal › Article › peer-review

  • Single-walled carbon nanotubes (SWCN)
  • Carbon Nanotubes
  • Wetting
  • wetting
  • carbon nanotubes
  21 Scopus citations

• Gap distance and interactions in a molecular tunnel junction

  Chang, S., He, J., Zhang, P., Gyarfas, B. & Lindsay, S., Sep 14 2011, In: Journal of the American Chemical Society. 133, 36, p. 14267-14269 3 p.

  Research output: Contribution to journal › Article › peer-review

  • Tunnel junctions
  • Electrodes
  • Surface Tension
  • DNA sequences
  • Molecules
  29 Scopus citations

• Next-generation and future DNA sequencing technologies and metagenomics

  Zhang, P., Gu, J., He, J., Gao, W., Zhang, W., Lindsay, S. & Meldrum, D., Dec 1 2011, Metagenomics and its Applications in Agriculture, Biomedicine and Environmental Studies. Nova Science Publishers, Inc., p. 79-106 28 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Metagenomics
  • Social Responsibility
  • DNA Sequence Analysis
  • Technology
  • DNA
  3 Scopus citations

• Optical modulation of molecular conductance

  Battacharyya, S., Kibel, A., Kodis, G., Liddell, P. A., Gervaldo, M., Gust, D. & Lindsay, S., Jul 13 2011, In: Nano Letters. 11, 7, p. 2709-2714 6 p.

  Research output: Contribution to journal › Article › peer-review

  • Light modulation
  • light modulation
  • Molecules
  • molecules
  • Porphyrins
  58 Scopus citations