TY - JOUR
T1 - 2-D magnetic resonance spectroscopic imaging of the pediatric brain using compressed sensing
AU - Vidya Shankar, Rohini
AU - Hu, Houchun H.
AU - Bikkamane Jayadev, Nutandev
AU - Chang, John C.
AU - Kodibagkar, Vikram D.
N1 - Funding Information:
The authors would like to acknowledge Luke Lammers (Arizona State University), Jeffrey Miller, MD, John Curran, MD, and the team of MR technologists at Phoenix Children’s Hospital for their support, as well as Kathy Zeblisky for reference assistance. The project was partly funded by research awards from the Phoenix Children’s Hospital Foundation and the Banner Foundation.
Funding Information:
The authors would like to acknowledge Luke Lammers (Arizona State University), Jeffrey Miller, MD, John Curran, MD, and the team of MR technologists at Phoenix Children?s Hospital for their support, as well as Kathy Zeblisky for reference assistance. The project was partly funded by research awards from the Phoenix Children?s Hospital Foundation and the Banner Foundation.
Publisher Copyright:
© 2019, Springer-Verlag GmbH Germany, part of Springer Nature.
Copyright:
Copyright 2019 Elsevier B.V., All rights reserved.
PY - 2019/12/1
Y1 - 2019/12/1
N2 - Background: Magnetic resonance spectroscopic imaging helps to determine abnormal brain tissue conditions by evaluating metabolite concentrations. Although a powerful technique, it is underutilized in routine clinical studies because of its long scan times. Objective: In this study, we evaluated the feasibility of scan time reduction in metabolic imaging using compressed-sensing-based MR spectroscopic imaging in pediatric patients undergoing routine brain exams. Materials and methods: We retrospectively evaluated compressed-sensing reconstructions in MR spectroscopic imaging datasets from 20 pediatric patients (11 males, 9 females; average age: 5.4±4.5 years; age range: 3 days to 16 years). We performed retrospective under-sampling of the MR spectroscopic imaging datasets to simulate accelerations of 2-, 3-, 4-, 5-, 7- and 10-fold, with subsequent reconstructions in MATLAB. Metabolite maps of N-acetylaspartate, creatine, choline and lactate (where applicable) were quantitatively evaluated in terms of the root-mean-square error (RMSE), peak amplitudes and total scan time. We used the two-tailed paired t-test along with linear regression analysis to statistically compare the compressed-sensing reconstructions at each acceleration with the fully sampled reference dataset. Results: High fidelity was maintained in the compressed-sensing MR spectroscopic imaging reconstructions from 50% to 80% under-sampling, with the RMSE not exceeding 3% in any dataset. Metabolite intensities and ratios evaluated on a voxel-by-voxel basis showed no statistically significant differences and mean metabolite intensities showed high correlation compared to the fully sampled reference dataset up to an acceleration factor of 5. Conclusion: Compressed-sensing MR spectroscopic imaging has the potential to reduce MR spectroscopic imaging scan times for pediatric patients, with negligible information loss.
AB - Background: Magnetic resonance spectroscopic imaging helps to determine abnormal brain tissue conditions by evaluating metabolite concentrations. Although a powerful technique, it is underutilized in routine clinical studies because of its long scan times. Objective: In this study, we evaluated the feasibility of scan time reduction in metabolic imaging using compressed-sensing-based MR spectroscopic imaging in pediatric patients undergoing routine brain exams. Materials and methods: We retrospectively evaluated compressed-sensing reconstructions in MR spectroscopic imaging datasets from 20 pediatric patients (11 males, 9 females; average age: 5.4±4.5 years; age range: 3 days to 16 years). We performed retrospective under-sampling of the MR spectroscopic imaging datasets to simulate accelerations of 2-, 3-, 4-, 5-, 7- and 10-fold, with subsequent reconstructions in MATLAB. Metabolite maps of N-acetylaspartate, creatine, choline and lactate (where applicable) were quantitatively evaluated in terms of the root-mean-square error (RMSE), peak amplitudes and total scan time. We used the two-tailed paired t-test along with linear regression analysis to statistically compare the compressed-sensing reconstructions at each acceleration with the fully sampled reference dataset. Results: High fidelity was maintained in the compressed-sensing MR spectroscopic imaging reconstructions from 50% to 80% under-sampling, with the RMSE not exceeding 3% in any dataset. Metabolite intensities and ratios evaluated on a voxel-by-voxel basis showed no statistically significant differences and mean metabolite intensities showed high correlation compared to the fully sampled reference dataset up to an acceleration factor of 5. Conclusion: Compressed-sensing MR spectroscopic imaging has the potential to reduce MR spectroscopic imaging scan times for pediatric patients, with negligible information loss.
KW - Brain
KW - Children
KW - Choline
KW - Compressed sensing
KW - Creatine
KW - Lactate
KW - Magnetic resonance spectroscopic imaging
KW - N-acetylaspartate
UR - http://www.scopus.com/inward/record.url?scp=85071950711&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=85071950711&partnerID=8YFLogxK
U2 - 10.1007/s00247-019-04495-1
DO - 10.1007/s00247-019-04495-1
M3 - Article
C2 - 31463513
AN - SCOPUS:85071950711
SN - 0301-0449
VL - 49
SP - 1798
EP - 1808
JO - Pediatric Radiology
JF - Pediatric Radiology
IS - 13
ER -