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Research Output 1998 2019

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2019
1 Citation (Scopus)

DNA-Nanoscaffold-Assisted Selection of Femtomolar Bivalent Human α-Thrombin Aptamers with Potent Anticoagulant Activity

Zhou, Y., Qi, X., Liu, Y., Zhang, F. & Yan, H., Oct 1 2019, In : ChemBioChem. 20, 19, p. 2494-2503 10 p.

Research output: Contribution to journalArticle

SELEX Aptamer Technique
Thrombin
Anticoagulants
Ligands
Plasma (human)

Efficient Long-Range, Directional Energy Transfer through DNA-Templated Dye Aggregates

Zhou, X., Mandal, S., Jiang, S., Lin, S., Yang, J., Liu, Y., Whitten, D. G., Woodbury, N. W. & Yan, H., Jan 1 2019, In : Journal of the American Chemical Society.

Research output: Contribution to journalArticle

Energy Transfer
Energy transfer
Coloring Agents
Dyes
Fluorescence

Nicking-assisted reactant recycle to implement entropy-driven DNA circuit

Zhang, C., Wang, Z., Liu, Y., Yang, J., Zhang, X., Li, Y., Pan, L., Ke, Y. & Yan, H., Jan 1 2019, (Accepted/In press) In : Journal of the American Chemical Society.

Research output: Contribution to journalArticle

Entropy
DNA
Recycling
Networks (circuits)
Catalytic DNA
2018
5 Citations (Scopus)

2D Enzyme Cascade Network with Efficient Substrate Channeling by Swinging Arms

Yang, Y. R., Fu, J., Wootten, S., Qi, X., Liu, M., Yan, H. & Liu, Y., Feb 2 2018, In : ChemBioChem. 19, 3, p. 212-216 5 p.

Research output: Contribution to journalArticle

Substrates
Enzymes
NAD
Atomic Force Microscopy
DNA
171 Citations (Scopus)

A DNA nanorobot functions as a cancer therapeutic in response to a molecular trigger in vivo

Li, S., Jiang, Q., Liu, S., Zhang, Y., Tian, Y., Song, C., Wang, J., Zou, Y., Anderson, G. J., Han, J. Y., Chang, Y., Liu, Y., Zhang, C., Chen, L., Zhou, G., Nie, G., Yan, H., Ding, B. & Zhao, Y., Mar 1 2018, In : Nature Biotechnology. 36, 3, p. 258-264 7 p.

Research output: Contribution to journalArticle

Nanorobots
Tumors
DNA
Neoplasms
Thrombin
2 Citations (Scopus)

Constructing Submonolayer DNA Origami Scaffold on Gold Electrode for Wiring of Redox Enzymatic Cascade Pathways

Ge, Z., Fu, J., Liu, M., Jiang, S., Andreoni, A., Zuo, X., Liu, Y., Yan, H. & Fan, C., Jan 1 2018, (Accepted/In press) In : ACS Applied Materials and Interfaces.

Research output: Contribution to journalArticle

Electric wiring
Scaffolds
Microelectronics
Gold
DNA
23 Citations (Scopus)

DNA-Guided Plasmonic Helix with Switchable Chirality

Lan, X., Liu, T., Wang, Z., Govorov, A. O., Yan, H. & Liu, Y., Sep 19 2018, In : Journal of the American Chemical Society. 140, 37, p. 11763-11770 8 p.

Research output: Contribution to journalArticle

Chirality
Nanotubes
DNA
Nanorods
Gold
24 Citations (Scopus)

DNA origami nanostructures can exhibit preferential renal uptake and alleviate acute kidney injury

Jiang, D., Ge, Z., Im, H. J., England, C. G., Ni, D., Hou, J., Zhang, L., Kutyreff, C. J., Yan, Y., Liu, Y., Cho, S. Y., Engle, J. W., Shi, J., Huang, P., Fan, C., Yan, H. & Cai, W., Nov 1 2018, In : Nature Biomedical Engineering. 2, 11, p. 865-877 13 p.

Research output: Contribution to journalArticle

Nanostructures
Acute Kidney Injury
DNA
Kidney
Positron emission tomography
4 Citations (Scopus)

Layered-Crossover Tiles with Precisely Tunable Angles for 2D and 3D DNA Crystal Engineering

Hong, F., Jiang, S., Lan, X., Narayanan, R. P., Sulc, P., Zhang, F., Liu, Y. & Yan, H., Nov 7 2018, In : Journal of the American Chemical Society. 140, 44, p. 14670-14676 7 p.

Research output: Contribution to journalArticle

Crystal engineering
Tile
DNA
Nanotechnology
Nanoparticles
6 Citations (Scopus)

Programming molecular topologies from single-stranded nucleic acids

Qi, X., Zhang, F., Su, Z., Jiang, S., Han, D., Ding, B., Liu, Y., Chiu, W., Yin, P. & Yan, H., Dec 1 2018, In : Nature Communications. 9, 1, 4579.

Research output: Contribution to journalArticle

Nanostructures
nucleic acids
programming
Nucleic Acids
topology
4 Citations (Scopus)

Self-Assembly of a 3D DNA Crystal Structure with Rationally Designed Six-Fold Symmetry

Zhang, F., Simmons, C. R., Gates, J., Liu, Y. & Yan, H., Sep 17 2018, In : Angewandte Chemie - International Edition. 57, 38, p. 12504-12507 4 p.

Research output: Contribution to journalArticle

Crystal symmetry
Crystal lattices
Self assembly
DNA
Crystal structure
2017
29 Citations (Scopus)

Cuboid Vesicles Formed by Frame-Guided Assembly on DNA Origami Scaffolds

Dong, Y., Yang, Y. R., Zhang, Y., Wang, D., Wei, X., Banerjee, S., Liu, Y., Yang, Z., Yan, H. & Liu, D., Feb 1 2017, In : Angewandte Chemie - International Edition. 56, 6, p. 1586-1589 4 p.

Research output: Contribution to journalArticle

Scaffolds
DNA
Amphiphiles
Surface-Active Agents
Nanostructures
211 Citations (Scopus)

DNA Origami: Scaffolds for Creating Higher Order Structures

Hong, F., Zhang, F., Liu, Y. & Yan, H., Oct 25 2017, In : Chemical Reviews. 117, 20, p. 12584-12640 57 p.

Research output: Contribution to journalArticle

Scaffolds
DNA
Single-Stranded DNA
Materials science
Oligonucleotides
21 Citations (Scopus)

Programmable Supra-Assembly of a DNA Surface Adapter for Tunable Chiral Directional Self-Assembly of Gold Nanorods

Lan, X., Su, Z., Zhou, Y., Meyer, T., Ke, Y., Wang, Q., Chiu, W., Liu, N., Zou, S., Yan, H. & Liu, Y., Nov 13 2017, In : Angewandte Chemie - International Edition. 56, 46, p. 14632-14636 5 p.

Research output: Contribution to journalArticle

Nanorods
Gold
Self assembly
DNA
Stairs
41 Citations (Scopus)

Single-stranded DNA and RNA origami

Han, D., Qi, X., Myhrvold, C., Wang, B., Dai, M., Jiang, S., Bates, M., Liu, Y., An, B., Zhang, F., Yan, H. & Yin, P., Dec 15 2017, In : Science. 358, 6369, aao2648.

Research output: Contribution to journalArticle

Nanostructures
Single-Stranded DNA
Nucleotides
RNA
Nanotechnology
8 Citations (Scopus)

Tuning the Cavity Size and Chirality of Self-Assembling 3D DNA Crystals

Simmons, C. R., Zhang, F., MacCulloch, T., Fahmi, N., Stephanopoulos, N., Liu, Y., Seeman, N. C. & Yan, H., Aug 16 2017, In : Journal of the American Chemical Society. 139, 32, p. 11254-11260 7 p.

Research output: Contribution to journalArticle

Chirality
DNA
Tuning
Crystals
Oligonucleotides
4 Citations (Scopus)

Understanding the Elementary Steps in DNA Tile-Based Self-Assembly

Jiang, S., Hong, F., Hu, H., Yan, H. & Liu, Y., Sep 26 2017, In : ACS Nano. 11, 9, p. 9370-9381 12 p.

Research output: Contribution to journalArticle

tiles
Tile
Self assembly
self assembly
DNA
2016
14 Citations (Scopus)

3D Framework DNA Origami with Layered Crossovers

Hong, F., Jiang, S., Wang, T., Liu, Y. & Yan, H., 2016, In : Angewandte Chemie - International Edition. 55, 41, p. 12832-12835 4 p.

Research output: Contribution to journalArticle

DNA
Nanostructures
Engineers
Scaffolds
Metals
19 Citations (Scopus)

A Three-Enzyme Pathway with an Optimised Geometric Arrangement to Facilitate Substrate Transfer

Liu, M., Fu, J., Qi, X., Wootten, S., Woodbury, N., Liu, Y. & Yan, H., Jun 16 2016, In : ChemBioChem. p. 1097-1101 5 p.

Research output: Contribution to journalArticle

Substrates
Enzymes
Molecules
DNA
19 Citations (Scopus)

Construction and Structure Determination of a Three-Dimensional DNA Crystal

Simmons, C. R., Zhang, F., Birktoft, J. J., Qi, X., Han, D., Liu, Y., Sha, R., Abdallah, H. O., Hernandez, C., Ohayon, Y. P., Seeman, N. C. & Yan, H., Aug 10 2016, In : Journal of the American Chemical Society. 138, 31, p. 10047-10054 8 p.

Research output: Contribution to journalArticle

DNA
Crystals
Nanotechnology
Nucleotides
Crystal lattices
45 Citations (Scopus)

Directional Regulation of Enzyme Pathways through the Control of Substrate Channeling on a DNA Origami Scaffold

Ke, G., Liu, M., Jiang, S., Qi, X., Yang, Y. R., Wootten, S., Zhang, F., Zhu, Z., Liu, Y., Yang, C. J. & Yan, H., 2016, (Accepted/In press) In : Angewandte Chemie - International Edition.

Research output: Contribution to journalArticle

Scaffolds (biology)
Scaffolds
DNA
Enzymes
Substrates
28 Citations (Scopus)

DNA based arithmetic function: A half adder based on DNA strand displacement

Li, W., Zhang, F., Yan, H. & Liu, Y., Feb 14 2016, In : Nanoscale. 8, 6, p. 3775-3784 10 p.

Research output: Contribution to journalArticle

Logic gates
Adders
DNA
Logic circuits
Nucleic acids
36 Citations (Scopus)

DNAzyme-Based Logic Gate-Mediated DNA Self-Assembly

Zhang, C., Yang, J., Jiang, S., Liu, Y. & Yan, H., Jan 13 2016, In : Nano Letters. 16, 1, p. 736-741 6 p.

Research output: Contribution to journalArticle

Catalytic DNA
Logic gates
Self assembly
logic
self assembly
151 Citations (Scopus)

Nanocaged enzymes with enhanced catalytic activity and increased stability against protease digestion

Zhao, Z., Fu, J., Dhakal, S., Johnson-Buck, A., Liu, M., Zhang, T., Woodbury, N., Liu, Y., Walter, N. G. & Yan, H., Feb 10 2016, In : Nature Communications. 7, 10619.

Research output: Contribution to journalArticle

protease
catalytic activity
enzymes
Digestion
Catalyst activity
16 Citations (Scopus)

Self-Assembly of Complex DNA Tessellations by Using Low-Symmetry Multi-arm DNA Tiles

Zhang, F., Jiang, S., Li, W., Hunt, A., Liu, Y. & Yan, H., 2016, (Accepted/In press) In : Angewandte Chemie - International Edition.

Research output: Contribution to journalArticle

Tile
Self assembly
DNA
Engineers
2015
156 Citations (Scopus)

Complex wireframe DNA origami nanostructures with multi-arm junction vertices

Zhang, F., Jiang, S., Wu, S., Li, Y., Mao, C., Liu, Y. & Yan, H., Sep 3 2015, In : Nature Nanotechnology. 10, 9, p. 779-784 6 p.

Research output: Contribution to journalArticle

Nanostructures
apexes
DNA
deoxyribonucleic acid
tiles
67 Citations (Scopus)

DNA Nanostructures as Programmable Biomolecular Scaffolds

Yang, Y. R., Liu, Y. & Yan, H., Aug 19 2015, In : Bioconjugate Chemistry. 26, 8, p. 1381-1395 15 p.

Research output: Contribution to journalArticle

Nanostructures
Scaffolds
DNA
Proteins
Engineers
47 Citations (Scopus)

DNA nanotechnology for nanophotonic applications

Samanta, A., Banerjee, S. & Liu, Y., Feb 14 2015, In : Nanoscale. 7, 6, p. 2210-2220 11 p.

Research output: Contribution to journalArticle

Nanophotonics
Nanotechnology
DNA
Self assembly
Nanoparticles
2014
49 Citations (Scopus)

A DNA-directed light-harvesting/reaction center system

Dutta, P. K., Levenberg, S., Loskutov, A., Jun, D., Saer, R., Beatty, J. T., Lin, S., Liu, Y., Woodbury, N. & Yan, H., Nov 26 2014, In : Journal of the American Chemical Society. 136, 47, p. 16618-16625 8 p.

Research output: Contribution to journalArticle

DNA
Light
Coloring Agents
Dyes
Optics and Photonics
14 Citations (Scopus)

Controlled nucleation and growth of DNA tile arrays within prescribed DNA origami frames and their dynamics

Li, W., Yang, Y., Jiang, S., Yan, H. & Liu, Y., Mar 12 2014, In : Journal of the American Chemical Society. 136, 10, p. 3724-3727 4 p.

Research output: Contribution to journalArticle

Tile
Oligonucleotide Array Sequence Analysis
DNA
Nucleation
Growth
95 Citations (Scopus)

Fluorescence quenching of quantum dots by gold nanoparticles: A potential long range spectroscopic ruler

Samanta, A., Zhou, Y., Zou, S., Yan, H. & Liu, Y., Sep 10 2014, In : Nano Letters. 14, 9, p. 5052-5057 6 p.

Research output: Contribution to journalArticle

Gold
Semiconductor quantum dots
Quenching
Fluorescence
quenching
17 Citations (Scopus)

Hierarchical assembly of plasmonic nanostructures using virus capsid scaffolds on DNA origami templates

Wang, D., Capehart, S. L., Pal, S., Liu, M., Zhang, L., Schuck, P. J., Liu, Y., Yan, H., Francis, M. B. & De Yoreo, J. J., 2014, In : ACS Nano. 8, 8, p. 7896-7904 9 p.

Research output: Contribution to journalArticle

viruses
Viruses
Scaffolds
Fluorophores
Nanostructures
22 Citations (Scopus)

Infrared emitting quantum dots: DNA conjugation and DNA origami directed self-assembly

Samanta, A., Deng, Z. & Liu, Y., May 7 2014, In : Nanoscale. 6, 9, p. 4486-4490 5 p.

Research output: Contribution to journalArticle

Self assembly
Semiconductor quantum dots
DNA
Ligands
Infrared radiation
9 Citations (Scopus)

Kinetics of DNA tile dimerization

Jiang, S., Yan, H. & Liu, Y., Jun 24 2014, In : ACS Nano. 8, 6, p. 5826-5832 7 p.

Research output: Contribution to journalArticle

Dimerization
tiles
Tile
dimerization
DNA
21 Citations (Scopus)

Low temperature assembly of functional 3D DNA-PNA-protein complexes

Flory, J. D., Simmons, C. R., Lin, S., Johnson, T., Andreoni, A., Zook, J., Ghirlanda, G., Liu, Y., Yan, H. & Fromme, P., Jun 11 2014, In : Journal of the American Chemical Society. 136, 23, p. 8283-8295 13 p.

Research output: Contribution to journalArticle

Peptide Nucleic Acids
DNA
Proteins
Temperature
Azurin
206 Citations (Scopus)

Multi-enzyme complexes on DNA scaffolds capable of substrate channelling with an artificial swinging arm

Fu, J., Yang, Y. R., Johnson-Buck, A., Liu, M., Liu, Y., Walter, N. G., Woodbury, N. & Yan, H., 2014, In : Nature Nanotechnology. 9, 7, p. 531-536 6 p.

Research output: Contribution to journalArticle

Scaffolds
enzymes
DNA
deoxyribonucleic acid
Nanostructures
31 Citations (Scopus)

Reengineering the optical absorption cross-section of photosynthetic reaction centers

Dutta, P. K., Lin, S., Loskutov, A., Levenberg, S., Jun, D., Saer, R., Beatty, J. T., Liu, Y., Yan, H. & Woodbury, N., Mar 26 2014, In : Journal of the American Chemical Society. 136, 12, p. 4599-4604 6 p.

Research output: Contribution to journalArticle

Photosynthetic Reaction Center Complex Proteins
Reengineering
Light absorption
Coloring Agents
Dyes
275 Citations (Scopus)

Structural DNA nanotechnology: State of the art and future perspective

Zhang, F., Nangreave, J., Liu, Y. & Yan, H., Aug 13 2014, In : Journal of the American Chemical Society. 136, 32, p. 11198-11211 14 p.

Research output: Contribution to journalArticle

Nanotechnology
DNA
Nanorobotics
Biocatalysis
Nanostructures
35 Citations (Scopus)

Uncovering the self-assembly of DNA nanostructures by thermodynamics and kinetics

Wei, X., Nangreave, J. & Liu, Y., Jun 17 2014, In : Accounts of Chemical Research. 47, 6, p. 1861-1870 10 p.

Research output: Contribution to journalArticle

Self assembly
Nanostructures
Thermodynamics
Kinetics
DNA
2013
158 Citations (Scopus)

A DNA tweezer-actuated enzyme nanoreactor

Liu, M., Fu, J., Hejesen, C., Yang, Y., Woodbury, N., Gothelf, K., Liu, Y. & Yan, H., 2013, In : Nature Communications. 4, 2127.

Research output: Contribution to journalArticle

Nanoreactors
enzymes
deoxyribonucleic acid
DNA
Enzymes
24 Citations (Scopus)

A perspective on functionalizing colloidal quantum dots with DNA

Samanta, A., Deng, Z., Liu, Y. & Yan, H., Dec 2013, In : Nano Research. 6, 12, p. 853-870 18 p.

Research output: Contribution to journalArticle

Semiconductor quantum dots
DNA
Ligands
Nanocrystals
Semiconductor materials
36 Citations (Scopus)

Complex archimedean tiling self-assembled from DNA nanostructures

Zhang, F., Liu, Y. & Yan, H., May 22 2013, In : Journal of the American Chemical Society. 135, 20, p. 7458-7461 4 p.

Research output: Contribution to journalArticle

Nanostructures
DNA
Tile
Nucleotide Motifs
Growth
16 Citations (Scopus)

DNA functionalization of colloidal II-VI semiconductor nanowires for multiplex nanoheterostructures

Deng, Z., Pal, S., Samanta, A., Yan, H. & Liu, Y., May 2013, In : Chemical Science. 4, 5, p. 2234-2240 7 p.

Research output: Contribution to journalArticle

Single-Stranded DNA
Nanowires
DNA
Biosensors
Semiconductor quantum dots
146 Citations (Scopus)

DNA gridiron nanostructures based on four-arm junctions

Han, D., Pal, S., Yang, Y., Jiang, S., Nangreave, J., Liu, Y. & Yan, H., Mar 22 2013, In : Science. 339, 6126, p. 1412-1415 4 p.

Research output: Contribution to journalArticle

Nanostructures
DNA
Nanotechnology
28 Citations (Scopus)

DNA origami templated self-assembly of discrete length single wall carbon nanotubes

Zhao, Z., Liu, Y. & Yan, H., Jan 28 2013, In : Organic and Biomolecular Chemistry. 11, 4, p. 596-598 3 p.

Research output: Contribution to journalArticle

Carbon Nanotubes
Nanotubes
Self assembly
self assembly
Single-Stranded DNA
5 Citations (Scopus)

Functionalized DNA nanostructures for nanomedicine

Liu, X., Liu, Y. & Yan, H., Aug 2013, In : Israel Journal of Chemistry. 53, 8, p. 555-566 12 p.

Research output: Contribution to journalArticle

Medical nanotechnology
Nanostructures
DNA
Nanotechnology
32 Citations (Scopus)

Mapping the thermal behavior of DNA origami nanostructures

Wei, X., Nangreave, J., Jiang, S., Yan, H. & Liu, Y., Apr 24 2013, In : Journal of the American Chemical Society. 135, 16, p. 6165-6176 12 p.

Research output: Contribution to journalArticle

Nanostructures
DNA
Hot Temperature
Energy Transfer
Energy transfer
16 Citations (Scopus)

On-chip isotachophoresis separation of functional DNA origami capture nanoarrays from cell lysate

Mei, Q., Johnson, R. H., Wei, X., Su, F., Liu, Y., Kelbauskas, L., Lindsay, S., Meldrum, D. & Yan, H., Oct 2013, In : Nano Research. 6, 10, p. 712-719 8 p.

Research output: Contribution to journalArticle

DNA
Thrombin
Nanostructures
Structural integrity
Fused silica
24 Citations (Scopus)

PNA-peptide assembly in a 3D DNA nanocage at room temperature

Flory, J. D., Shinde, S., Lin, S., Liu, Y., Yan, H., Ghirlanda, G. & Fromme, P., May 8 2013, In : Journal of the American Chemical Society. 135, 18, p. 6985-6993 9 p.

Research output: Contribution to journalArticle

Peptide Nucleic Acids
Peptides
DNA
Temperature
Polypeptides
31 Citations (Scopus)

Quantum efficiency modification of organic fluorophores using gold nanoparticles on DNA origami scaffolds

Pal, S., Dutta, P., Wang, H., Deng, Z., Zou, S., Yan, H. & Liu, Y., Jun 20 2013, In : Journal of Physical Chemistry C. 117, 24, p. 12735-12744 10 p.

Research output: Contribution to journalArticle

Fluorophores
Quantum efficiency
Scaffolds
Gold
quantum efficiency