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Research Output 1900 2019

2019

High-viscosity injector-based pink-beam serial crystallography of microcrystals at a synchrotron radiation source

Martin-Garcia, J. M., Zhu, L., Mendez, D., Lee, M. Y., Chun, E., Li, C., Hu, H., Subramanian, G., Kissick, D., Ogata, C., Henning, R., Ishchenko, A., Dobson, Z., Zhang, S., Weierstall, U., Spence, J., Fromme, P., Zatsepin, N., Fischetti, R. F., Cherezov, V. & 1 othersLiu, W., Jan 1 2019, In : IUCrJ. 6, p. 412-425 14 p.

Research output: Contribution to journalArticle

Open Access
Crystallography
Microcrystals
Synchrotrons
microcrystals
Synchrotron radiation
2 Citations (Scopus)

Snapshot of an oxygen intermediate in the catalytic reaction of cytochrome c oxidase

Ishigami, I., Lewis-Ballester, A., Echelmeier, A., Brehm, G., Zatsepin, N., Grant, T. D., Coe, J. D., Lisova, S., Nelson, G., Zhang, S., Dobson, Z. F., Boutet, S., Sierra, R. G., Batyuk, A., Fromme, P., Fromme, R., Spence, J., Ros, A., Yeh, S. R. & Rousseau, D. L., Feb 26 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 9, p. 3572-3577 6 p.

Research output: Contribution to journalArticle

Electron Transport Complex IV
Oxygen
Protons
Protein Conformation
Crystallography

SPIND: A reference-based auto-indexing algorithm for sparse serial crystallography data

Li, C., Li, X., Kirian, R., Spence, J., Liu, H. & Zatsepin, N., Jan 1 2019, In : IUCrJ. 6, p. 72-84 13 p.

Research output: Contribution to journalArticle

Crystallography
Diffraction patterns
crystallography
Boidae
Proteins
2018
2 Citations (Scopus)
X ray absorption spectroscopy
Cobalt
Ground state
absorption spectroscopy
cobalt
16 Citations (Scopus)

Enzyme intermediates captured "on the fly" by mix-and-inject serial crystallography

Olmos, J. L., Pandey, S., Martin-Garcia, J. M., Calvey, G., Katz, A., Knoska, J., Kupitz, C., Hunter, M. S., Liang, M., Oberthuer, D., Yefanov, O., Wiedorn, M., Heyman, M., Holl, M., Pande, K., Barty, A., Miller, M. D., Stern, S., Roy-Chowdhury, S., Coe, J. & 30 othersNagaratnam, N., Zook, J., Verburgt, J., Norwood, T., Poudyal, I., Xu, D., Koglin, J., Seaberg, M. H., Zhao, Y., Bajt, S., Grant, T., Mariani, V., Nelson, G., Subramanian, G., Bae, E., Fromme, R., Fung, R., Schwander, P., Frank, M., White, T. A., Weierstall, U., Zatsepin, N., Spence, J., Fromme, P., Chapman, H. N., Pollack, L., Tremblay, L., Ourmazd, A., Phillips, G. N. & Schmidt, M., May 31 2018, In : BMC Biology. 16, 1, 59.

Research output: Contribution to journalArticle

crystallography
Crystallography
Diptera
X-radiation
X-Rays
2 Citations (Scopus)

Structural basis for light control of cell development revealed by crystal structures of a myxobacterial phytochrome

Woitowich, N. C., Halavaty, A. S., Waltz, P., Kupitz, C., Valera, J., Tracy, G., Gallagher, K. D., Claesson, E., Nakane, T., Pandey, S., Nelson, G., Tanaka, R., Nango, E., Mizohata, E., Owada, S., Tono, K., Joti, Y., Nugent, A. C., Patel, H., Mapara, A. & 21 othersHopkins, J., Duong, P., Bizhga, D., Kovaleva, S. E., Peter, R. S., Hernandez, C. N., Ozarowski, W. B., Roy-Chowdhuri, S., Yang, J. H., Edlund, P., Takala, H., Ihalainen, J., Brayshaw, J., Norwood, T., Poudyal, I., Fromme, P., Spence, J., Moffat, K., Westenhoff, S., Schmidt, M. & Stojković, E. A., Jan 1 2018, In : IUCrJ. 5, p. 619-634 16 p.

Research output: Contribution to journalArticle

phytochrome
Phytochrome
Threonine
Chromophores
Myxococcales

Supersaturation-controlled microcrystallization and visualization analysis for serial femtosecond crystallography

Lee, D. B., Kim, J. M., Seok, J. H., Lee, J. H., Jo, J. D., Mun, J. Y., Conrad, C., Coe, J., Nelson, G., Hogue, B., White, T. A., Zatsepin, N., Weierstall, U., Barty, A., Chapman, H., Fromme, P., Spence, J., Chung, M. S., Oh, C. H. & Kim, K. H., Dec 1 2018, In : Scientific Reports. 8, 1, 2541.

Research output: Contribution to journalArticle

supersaturation
crystallography
microcrystals
free electron lasers
evaporation
1 Citation (Scopus)

The phase problem for two-dimensional crystals.II. Simulations

Arnal, R. D., Zhao, Y., Mitra, A. K., Spence, J. & Millane, R. P., Sep 1 2018, In : Acta Crystallographica Section A: Foundations and Advances. 74, 5, p. 537-544 8 p.

Research output: Contribution to journalArticle

X ray lasers
Free electron lasers
free electron lasers
Lasers
envelopes
2 Citations (Scopus)

X-ray lasers for structure and dynamics in biology

Spence, J., Jan 1 2018, In : IUCrJ. 5, p. 236-237 2 p.

Research output: Contribution to journalEditorial

X ray lasers
biology
Lasers
X-Rays
lasers
2017
26 Citations (Scopus)

Atomic structure of granulin determined from native nanocrystalline granulovirus using an X-ray free-electron laser

Gati, C., Oberthuer, D., Yefanov, O., Bunker, R. D., Stellato, F., Chiu, E., Yeh, S. M., Aquila, A., Basu, S., Bean, R., Beyerlein, K. R., Botha, S., Boutet, S., DePonte, D. P., Doak, R. B., Fromme, R., Galli, L., Grotjohann, I., James, D. R., Kupitz, C. & 17 othersLomb, L., Messerschmidt, M., Nass, K., Rendek, K., Shoeman, R. L., Wang, D., Weierstall, U., White, T. A., Williams, G. J., Zatsepin, N., Fromme, P., Spence, J., Goldie, K. N., Jehle, J. A., Metcalf, P., Barty, A. & Chapman, H. N., Feb 28 2017, In : Proceedings of the National Academy of Sciences of the United States of America. 114, 9, p. 2247-2252 6 p.

Research output: Contribution to journalArticle

Granulovirus
Lasers
X-Rays
Electrons
Radiation

CHAPTER 2: Imaging Protein Dynamics by XFELs

Spence, J., 2017, Thermoelectric Materials and Devices. 18 ed. Royal Society of Chemistry, Vol. 2017-January. p. 47-69 23 p. (RSC Energy and Environment Series; vol. 2017-January, no. 18).

Research output: Chapter in Book/Report/Conference proceedingChapter

Proteins
Imaging techniques
radiation damage
protein
chemical reaction
16 Citations (Scopus)

Coherent soft X-ray diffraction imaging of coliphage PR772 at the Linac coherent light source

Reddy, H. K. N., Yoon, C. H., Aquila, A., Awel, S., Ayyer, K., Barty, A., Berntsen, P., Bielecki, J., Bobkov, S., Bucher, M., Carini, G. A., Carron, S., Chapman, H., Daurer, B., Demirci, H., Ekeberg, T., Fromme, P., Hajdu, J., Hanke, M. F., Hart, P. & 25 othersHogue, B., Hosseinizadeh, A., Kim, Y., Kirian, R., Kurta, R. P., Larsson, D. S. D., Duane Loh, N., Maia, F. R. N. C., Mancuso, A. P., Mühlig, K., Munke, A., Nam, D., Nettelblad, C., Ourmazd, A., Rose, M., Schwander, P., Seibert, M., Sellberg, J. A., Song, C., Spence, J., Svenda, M., Van Der Schot, G., Vartanyants, I. A., Williams, G. J. & Lourdu Xavier, P., Jun 27 2017, In : Scientific data. 4, 170079.

Research output: Contribution to journalArticle

X ray lasers
Molecular imaging
Soft X-ray
Free electron lasers
Viruses
1 Citation (Scopus)

Corrigendum: Double-flow focused liquid injector for efficient serial femtosecond crystallography

Oberthuer, D., Knoška, J., Wiedorn, M. O., Beyerlein, K. R., Bushnell, D. A., Kovaleva, E. G., Heymann, M., Gumprecht, L., Kirian, R., Barty, A., Mariani, V., Tolstikova, A., Adriano, L., Awel, S., Barthelmess, M., Dörner, K., Xavier, P. L., Yefanov, O., James, D. R., Nelson, G. & 25 othersWang, D., Calvey, G., Chen, Y., Schmidt, A., Szczepek, M., Frielingsdorf, S., Lenz, O., Snell, E., Robinson, P. J., Šarler, B., Belšak, G., Maček, M., Wilde, F., Aquila, A., Boutet, S., Liang, M., Hunter, M. S., Scheerer, P., Lipscomb, J. D., Weierstall, U., Kornberg, R. D., Spence, J., Pollack, L., Chapman, H. N. & Bajt, S., Jun 21 2017, In : Scientific reports. 7, 1 p.

Research output: Contribution to journalComment/debate

Open Access
Crystallography
corrigendum
3 Citations (Scopus)

Diffraction data of core-shell nanoparticles from an X-ray free electron laser

Li, X., Chiu, C. Y., Wang, H. J., Kassemeyer, S., Botha, S., Shoeman, R. L., Lawrence, R. M., Kupitz, C., Kirian, R., James, D., Wang, DI., Nelson, G., Messerschmidt, M., Boutet, S., Williams, G. J., Hartmann, E., Jafarpour, A., Foucar, L. M., Barty, A., Chapman, H. & 13 othersLiang, M., Menzel, A., Wang, F., Basu, S., Fromme, R., Doak, R. B., Fromme, P., Weierstall, U., Huang, M. H., Spence, J., Schlichting, I., Hogue, B. & Liu, H., Apr 11 2017, In : Scientific data. 4, 170048.

Research output: Contribution to journalArticle

X ray lasers
X-ray Laser
Free Electron Laser
Free electron lasers
Nanoparticles
29 Citations (Scopus)

Double-flow focused liquid injector for efficient serial femtosecond crystallography

Oberthuer, D., Knoška, J., Wiedorn, M. O., Beyerlein, K. R., Bushnell, D. A., Kovaleva, E. G., Heymann, M., Gumprecht, L., Kirian, R., Barty, A., Mariani, V., Tolstikova, A., Adriano, L., Awel, S., Barthelmess, M., Dörner, K., Xavier, P. L., Yefanov, O., James, D. R., Nelson, G. & 25 othersWang, D., Calvey, G., Chen, Y., Schmidt, A., Szczepek, M., Frielingsdorf, S., Lenz, O., Snell, E., Robinson, P. J., Šarler, B., Belšak, G., Maček, M., Wilde, F., Aquila, A., Boutet, S., Liang, M., Hunter, M. S., Scheerer, P., Lipscomb, J. D., Weierstall, U., Kornberg, R. D., Spence, J., Pollack, L., Chapman, H. N. & Bajt, S., Mar 16 2017, In : Scientific Reports. 7, 44628.

Research output: Contribution to journalArticle

liquid flow
injectors
nozzles
crystallography
room temperature

Local electric field direct writing – Electron-beam lithography and mechanism

Jiang, N., Su, D. & Spence, J., Oct 5 2017, In : Microelectronic Engineering. 182, p. 8-14 7 p.

Research output: Contribution to journalArticle

Electron beam lithography
electron probes
lithography
Electric fields
electron beams
1 Citation (Scopus)

Merging single-shot XFEL diffraction data from inorganic nanoparticles: A new approach to size and orientation determination

Li, X., Spence, J., Hogue, B. & Liu, H., 2017, In : IUCrJ. 4, p. 741-750 10 p.

Research output: Contribution to journalArticle

size determination
X ray lasers
Free electron lasers
Merging
free electron lasers
7 Citations (Scopus)

Outrunning damage: Electrons vs X-rays-timescales and mechanisms

Spence, J., Jul 1 2017, In : Structural Dynamics. 4, 4, 044027.

Research output: Contribution to journalArticle

X ray lasers
damage
X rays
Elastic scattering
Electrons
13 Citations (Scopus)

Serial crystallography at synchrotrons and X-ray lasers

Standfuss, J. & Spence, J., 2017, In : IUCrJ. 4, p. 100-101 2 p.

Research output: Contribution to journalEditorial

24 Citations (Scopus)

Serial millisecond crystallography of membrane and soluble protein microcrystals using synchrotron radiation

Martin-Garcia, J. M., Conrad, C. E., Nelson, G., Stander, N., Zatsepin, N., Zook, J., Zhu, L., Geiger, J., Chun, E., Kissick, D., Hilgart, M. C., Ogata, C., Ishchenko, A., Nagaratnam, N., Roy-Chowdhury, S., Coe, J., Subramanian, G., Schaffer, A., James, D., Ketwala, G. & 10 othersVenugopalan, N., Xu, S., Corcoran, S., Ferguson, D., Weierstall, U., Spence, J., Cherezov, V., Fromme, P., Fischetti, R. F. & Liu, W., 2017, In : IUCrJ. 4, p. 439-454 16 p.

Research output: Contribution to journalArticle

Crystallography
Microcrystals
Synchrotrons
microcrystals
Phycocyanin
26 Citations (Scopus)

Short-wavelength free-electron laser sources and science: A review

Seddon, E. A., Clarke, J. A., Dunning, D. J., Masciovecchio, C., Milne, C. J., Parmigiani, F., Rugg, D., Spence, J., Thompson, N. R., Ueda, K., Vinko, S. M., Wark, J. S. & Wurth, W., Oct 23 2017, In : Reports on Progress in Physics. 80, 11, 115901.

Research output: Contribution to journalReview article

free electron lasers
wavelengths
physics
molecular physics
x ray lasers
1 Citation (Scopus)

Split-Second Reactions

Fromme, P. & Spence, J., Apr 18 2017, In : Scientific American. 316, 5, p. 62-67 6 p.

Research output: Contribution to journalArticle

32 Citations (Scopus)

Structural enzymology using X-ray free electron lasers

Kupitz, C., Olmos, J. L., Holl, M., Tremblay, L., Pande, K., Pandey, S., Oberthür, D., Hunter, M., Liang, M., Aquila, A., Tenboer, J., Calvey, G., Katz, A., Chen, Y., Wiedorn, M. O., Knoska, J., Meents, A., Majriani, V., Norwood, T., Poudyal, I. & 30 othersGrant, T., Miller, M. D., Xu, W., Tolstikova, A., Morgan, A., Metz, M., Martin-Gracia, J., Zook, J. D., Roy-Chowdhury, S., Coe, J., Nagaratnam, N., Meza, D., Fromme, R., Basu, S., Frank, M., White, T., Barty, A., Bajt, S., Yefanov, O., Chapman, H. N., Zatsepin, N., Nelson, G., Weierstall, U., Spence, J., Schwander, P., Pollack, L., Fromme, P., Ourmazd, A., Phillips, G. N. & Schmidt, M., Jul 1 2017, In : Structural Dynamics. 4, 4, 044003.

Research output: Contribution to journalArticle

enzymology
X ray lasers
Crystallography
Ceftriaxone
Free electron lasers
68 Citations (Scopus)

Structures of riboswitch RNA reaction states by mix-and-inject XFEL serial crystallography

Stagno, J. R., Liu, Y., Bhandari, Y. R., Conrad, C. E., Panja, S., Swain, M., Fan, L., Nelson, G., Li, C., Wendel, D. R., White, T. A., Coe, J. D., Wiedorn, M. O., Knoska, J., Oberthuer, D., Tuckey, R. A., Yu, P., Dyba, M., Tarasov, S. G., Weierstall, U. & 18 othersGrant, T. D., Schwieters, C. D., Zhang, J., Ferré-D'Amaré, A. R., Fromme, P., Draper, D. E., Liang, M., Hunter, M. S., Boutet, S., Tan, K., Zuo, X., Ji, X., Barty, A., Zatsepin, N., Chapman, H. N., Spence, J., Woodson, S. A. & Wang, Y. X., Jan 12 2017, In : Nature. 541, 7636, p. 242-246 5 p.

Research output: Contribution to journalArticle

Riboswitch
Crystallography
Lasers
X-Rays
RNA
38 Citations (Scopus)

XFELs for structure and dynamics in biology

Spence, J., 2017, In : IUCrJ. 4, p. 322-339 18 p.

Research output: Contribution to journalArticle

Radiation damage
biology
Diffraction
X-Rays
Scattering
6 Citations (Scopus)

X-Ray Lasers in Biology Structure and Dynamics

Spence, J., 2017, Advances in Imaging and Electron Physics. Academic Press Inc., Vol. 200. p. 103-152 50 p. (Advances in Imaging and Electron Physics; vol. 200).

Research output: Chapter in Book/Report/Conference proceedingChapter

X ray lasers
biology
radiation damage
Radiation damage
proteins
2016
15 Citations (Scopus)

Advanced transmission electron microscopy: Imaging and diffraction in nanoscience

Zuo, J. M. & Spence, J., Jan 1 2016, Springer New York. 729 p.

Research output: Book/ReportBook

Nanoscience
Transmission Electron Microscopy
Diffraction
Electrons
Transmission electron microscopy
143 Citations (Scopus)

Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein

Pande, K., Hutchison, C. D. M., Groenhof, G., Aquila, A., Robinson, J. S., Tenboer, J., Basu, S., Boutet, S., DePonte, D. P., Liang, M., White, T. A., Zatsepin, N., Yefanov, O., Morozov, D., Oberthuer, D., Gati, C., Subramanian, G., James, D., Zhao, Y., Koralek, J. & 24 othersBrayshaw, J., Kupitz, C., Conrad, C., Roy-Chowdhury, S., Coe, J. D., Metz, M., Xavier, P. L., Grant, T. D., Koglin, J. E., Ketawala, G., Fromme, R., Srajer, V., Henning, R., Spence, J., Ourmazd, A., Schwander, P., Weierstall, U., Frank, M., Fromme, P., Barty, A., Chapman, H. N., Moffat, K., Van Thor, J. J. & Schmidt, M., May 6 2016, In : Science. 352, 6286, p. 725-729 5 p.

Research output: Contribution to journalArticle

Light
Crystallography
Proteins
Photons
X-Rays
7 Citations (Scopus)

Imaging enzyme kinetics at atomic resolution

Spence, J. & Lattman, E., 2016, In : IUCrJ. 3, p. 228-229 2 p.

Research output: Contribution to journalComment/debate

Enzyme kinetics
Radiolysis
Denitrification
Radiation damage
Synchrotron radiation
30 Citations (Scopus)

Lipidic cubic phase injector is a viable crystal delivery system for time-resolved serial crystallography

Nogly, P., Panneels, V., Nelson, G., Gati, C., Kimura, T., Milne, C., Milathianaki, D., Kubo, M., Wu, W., Conrad, C., Coe, J., Bean, R., Zhao, Y., Båth, P., Dods, R., Harimoorthy, R., Beyerlein, K. R., Rheinberger, J., James, D., DePonte, D. & 20 othersLi, C., Sala, L., Williams, G. J., Hunter, M. S., Koglin, J. E., Berntsen, P., Nango, E., Iwata, S., Chapman, H. N., Fromme, P., Frank, M., Abela, R., Boutet, S., Barty, A., White, T. A., Weierstall, U., Spence, J., Neutze, R., Schertler, G. & Standfuss, J., Aug 22 2016, In : Nature Communications. 7, 12314.

Research output: Contribution to journalArticle

Bacteriorhodopsins
Crystallography
injectors
crystallography
delivery
67 Citations (Scopus)

Macromolecular diffractive imaging using imperfect crystals

Ayyer, K., Yefanov, O. M., Oberthür, D., Roy-Chowdhury, S., Galli, L., Mariani, V., Basu, S., Coe, J., Conrad, C. E., Fromme, R., Schaffer, A., Dörner, K., James, D., Kupitz, C., Metz, M., Nelson, G., Xavier, P. L., Beyerlein, K. R., Schmidt, M., Sarrou, I. & 14 othersSpence, J., Weierstall, U., White, T. A., Yang, J. H., Zhao, Y., Liang, M., Aquila, A., Hunter, M. S., Robinson, J. S., Koglin, J. E., Boutet, S., Fromme, P., Barty, A. & Chapman, H. N., Feb 10 2016, In : Nature. 530, 7589, p. 202-206 5 p.

Research output: Contribution to journalArticle

Photosystem II Protein Complex
Crystallography
X Ray Crystallography
Cell Size
X-Ray Diffraction
1 Citation (Scopus)

Measurements of transmitted electron beam extinction through Si crystal membranes

Nanni, E. A., Li, R. K., Limborg, C., Shen, X., Weathersby, S., Graves, W., Kirian, R., Spence, J. & Weierstall, U., 2016, IPAC 2016 - Proceedings of the 7th International Particle Accelerator Conference. Joint Accelerator Conferences Website (JACoW), p. 1611-1614 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

extinction
electron beams
membranes
crystals
modulation
38 Citations (Scopus)

Native phasing of x-ray free-electron laser data for a G protein–coupled receptor

Batyuk, A., Galli, L., Ishchenko, A., Han, G. W., Gati, C., Popov, P. A., Lee, M. Y., Stauch, B., White, T. A., Barty, A., Aquila, A., Hunter, M. S., Liang, M., Boutet, S., Pu, M., Liu, Z. J., Nelson, G., James, D., Li, C., Zhao, Y. & 7 othersSpence, J., Liu, W., Fromme, P., Katritch, V., Weierstall, U., Stevens, R. C. & Cherezov, V., Sep 1 2016, In : Science advances. 2, 9, e1600292.

Research output: Contribution to journalArticle

Lasers
X-Rays
Electrons
Adenosine A2A Receptors
Crystallography

Ondrej Krivanek's early scientific research

Spence, J., Oct 2 2016, (Accepted/In press) In : Ultramicroscopy.

Research output: Contribution to journalArticle

Electron energy loss spectroscopy
X ray lasers
Multiple scattering
Free electron lasers
Radiation damage
14 Citations (Scopus)

The room temperature crystal structure of a bacterial phytochrome determined by serial femtosecond crystallography

Edlund, P., Takala, H., Claesson, E., Henry, L., Dods, R., Lehtivuori, H., Panman, M., Pande, K., White, T., Nakane, T., Berntsson, O., Gustavsson, E., Båth, P., Modi, V., Roy-Chowdhury, S., Zook, J., Berntsen, P., Pandey, S., Poudyal, I., Tenboer, J. & 16 othersKupitz, C., Barty, A., Fromme, P., Koralek, J. D., Tanaka, T., Spence, J., Liang, M., Hunter, M. S., Boutet, S., Nango, E., Moffat, K., Groenhof, G., Ihalainen, J., Stojkovi, E. A., Schmidt, M. & Westenhoff, S., Oct 19 2016, In : Scientific Reports. 6, 35279.

Research output: Contribution to journalArticle

Phytochrome
Bacterial Structures
Crystallography
Temperature
Deinococcus
23 Citations (Scopus)

Three-dimensional-printed gas dynamic virtual nozzles for x-ray laser sample delivery

Nelson, G., Kirian, R., Weierstall, U., Zatsepin, N., Faragó, T., Baumbach, T., Wilde, F., Niesler, F. B. P., Zimmer, B., Ishigami, I., Hikita, M., Bajt, S., Yeh, S. R., Rousseau, D. L., Chapman, H. N., Spence, J. & Heymann, M., May 30 2016, In : Optics Express. 24, 11, p. 11515-11530 16 p.

Research output: Contribution to journalArticle

x ray lasers
gas dynamics
nozzles
delivery
free electron lasers
7 Citations (Scopus)

XFEL data analysis for structural biology

Liu, H. & Spence, J., Sep 1 2016, In : Quantitative Biology. 4, 3, p. 159-176 18 p.

Research output: Contribution to journalReview article

X ray lasers
X-ray Laser
Free Electron Laser
Free electron lasers
Biology
19 Citations (Scopus)

X-ray laser diffraction for structure determination of the rhodopsin-arrestin complex

Zhou, X. E., Gao, X., Barty, A., Kang, Y., He, Y., Liu, W., Ishchenko, A., White, T. A., Yefanov, O., Han, G. W., Xu, Q., De Waal, P. W., Suino-Powell, K. M., Boutet, S., Williams, G. J., Wang, M., Li, D., Caffrey, M., Chapman, H. N., Spence, J. & 6 othersFromme, P., Weierstall, U., Stevens, R. C., Cherezov, V., Melcher, K. & Xu, H. E., Apr 12 2016, In : Scientific data. 3, 201621.

Research output: Contribution to journalArticle

X ray lasers
X-ray Laser
Free Electron Laser
Free electron lasers
Femtosecond
2015
59 Citations (Scopus)

A novel inert crystal delivery medium for serial femtosecond crystallography

Conrad, C. E., Basu, S., James, D., Wang, D., Schaffer, A., Roy-Chowdhury, S., Zatsepin, N., Aquila, A., Coe, J., Gati, C., Hunter, M. S., Koglin, J. E., Kupitz, C., Nelson, G., Subramanian, G., White, T. A., Zhao, Y., Zook, J., Boutet, S., Cherezov, V. & 4 othersSpence, J., Fromme, R., Weierstall, U. & Fromme, P., Jul 1 2015, In : IUCrJ. 2, p. 421-430 10 p.

Research output: Contribution to journalArticle

Crystallography
crystallography
delivery
Sepharose
proteins
1 Citation (Scopus)

Biphasic droplet-based sample delivery of protein crystals for serial femtosecond crystallography with an x-ray free electron laser

Echelmeier, A., Nelson, G., Abdallah, B. G., James, D., Roy-Chowdhury, S., Tolstikova, A., Mariani, V., Kirian, R., Oberthüer, D., Dörner, K., Fromme, P., Chapman, H. N., Weierstall, U., Spence, J. & Ros, A., 2015, MicroTAS 2015 - 19th International Conference on Miniaturized Systems for Chemistry and Life Sciences. Chemical and Biological Microsystems Society, p. 1374-1376 3 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Crystallography
Free electron lasers
X ray lasers
Proteins
X rays
339 Citations (Scopus)

Crystal structure of rhodopsin bound to arrestin by femtosecond X-ray laser

Kang, Y., Zhou, X. E., Gao, X., He, Y., Liu, W., Ishchenko, A., Barty, A., White, T. A., Yefanov, O., Han, G. W., Xu, Q., De Waal, P. W., Ke, J., Tan, M. H. E., Zhang, C., Moeller, A., West, G. M., Pascal, B. D., Van Eps, N., Caro, L. N. & 52 othersVishnivetskiy, S. A., Lee, R. J., Suino-Powell, K. M., Gu, X., Pal, K., Ma, J., Zhi, X., Boutet, S., Williams, G. J., Messerschmidt, M., Gati, C., Zatsepin, N., Wang, D., James, D., Basu, S., Roy-Chowdhury, S., Conrad, C. E., Coe, J., Liu, H., Lisova, S., Kupitz, C., Grotjohann, I., Fromme, R., Jiang, Y., Tan, M., Yang, H., Li, J., Wang, M., Zheng, Z., Li, D., Howe, N., Zhao, Y., Standfuss, J., Diederichs, K., Dong, Y., Potter, C. S., Carragher, B., Caffrey, M., Jiang, H., Chapman, H. N., Spence, J., Fromme, P., Weierstall, U., Ernst, O. P., Katritch, V., Gurevich, V. V., Griffin, P. R., Hubbell, W. L., Stevens, R. C., Cherezov, V., Melcher, K. & Xu, H. E., Jul 30 2015, In : Nature. 523, 7562, p. 561-567 7 p.

Research output: Contribution to journalArticle

Arrestin
Rhodopsin
Lasers
X-Rays
G-Protein-Coupled Receptors
5 Citations (Scopus)

Data collection strategies for time-resolved X-ray free-electron laser diffraction, and 2-color methods

Li, C., Schmidt, K. & Spence, J., Jul 1 2015, In : Structural Dynamics. 2, 4, 041714.

Research output: Contribution to journalArticle

X ray lasers
Free electron lasers
free electron lasers
Diffraction
shot
9 Citations (Scopus)

Electronic damage in S atoms in a native protein crystal induced by an intense X-ray free-electron laser pulse

Galli, L., Son, S. K., Klinge, M., Bajt, S., Barty, A., Bean, R., Betzel, C., Beyerlein, K. R., Caleman, C., Doak, R. B., Duszenko, M., Fleckenstein, H., Gati, C., Hunt, B., Kirian, R., Liang, M., Nanao, M. H., Nass, K., Oberthür, D., Redecke, L. & 7 othersShoeman, R., Stellato, F., Yoon, C. H., White, T. A., Yefanov, O., Spence, J. & Chapman, H. N., Jul 1 2015, In : Structural Dynamics. 2, 4, 041703.

Research output: Contribution to journalArticle

X ray lasers
Free electron lasers
Radiation damage
radiation damage
free electron lasers
7 Citations (Scopus)

Hollow cone illumination for fast TEM, and outrunning damage with electrons

Spence, J., Subramanian, G. & Musumeci, P., Sep 23 2015, In : Journal of Physics B: Atomic, Molecular and Optical Physics. 48, 21, 214003.

Research output: Contribution to journalArticle

hollow
cones
illumination
damage
transmission electron microscopy
1 Citation (Scopus)

Image reconstruction in serial femtosecond nanocrystallography using x-ray free-electron lasers

Chen, J. P. J., Kirian, R., Beyerlein, K. R., Bean, R. J., Morgan, A. J., Yefanov, O. M., Arnal, R. D., Wojtas, D. H., Bones, P. J., Chapman, H. N., Spence, J. & Millane, R. P., 2015, Proceedings of SPIE - The International Society for Optical Engineering. SPIE, Vol. 9600. 960002

Research output: Chapter in Book/Report/Conference proceedingConference contribution

X-ray Laser
Free Electron Laser
x ray lasers
Femtosecond
Free electron lasers
89 Citations (Scopus)

Lipidic cubic phase serial millisecond crystallography using synchrotron radiation

Nogly, P., James, D., Wang, D., White, T. A., Zatsepin, N., Shilova, A., Nelson, G., Liu, H., Johansson, L., Heymann, M., Jaeger, K., Metz, M., Wickstrand, C., Wu, W., Båth, P., Berntsen, P., Oberthuer, D., Panneels, V., Cherezov, V., Chapman, H. & 7 othersSchertler, G., Neutze, R., Spence, J., Moraes, I., Burghammer, M., Standfuss, J. & Weierstall, U., Feb 26 2015, In : IUCrJ. 2, p. 168-176 9 p.

Research output: Contribution to journalArticle

Bacteriorhodopsins
Crystallography
Synchrotrons
Synchrotron radiation
crystallography
8 Citations (Scopus)

Microfluidic sorting of protein nanocrystals by size for X-ray free-electron laser diffraction

Abdallah, B. G., Zatsepin, N., Roy-Chowdhury, S., Coe, J., Conrad, C. E., Dörner, K., Sierra, R. G., Stevenson, H. P., Camacho-Alanis, F., Grant, T. D., Nelson, G., James, D., Calero, G., Wachter, R., Spence, J., Weierstall, U., Fromme, P. & Ros, A., Jul 1 2015, In : Structural Dynamics. 2, 4, 041719.

Research output: Contribution to journalArticle

X ray lasers
Free electron lasers
classifying
Sorting
Microfluidics
31 Citations (Scopus)

Serial femtosecond crystallography of soluble proteins in lipidic cubic phase

Fromme, R., Ishchenko, A., Metz, M., Chowdhury, S. R., Basu, S., Boutet, S., Fromme, P., White, T. A., Barty, A., Spence, J., Weierstall, U., Liu, W. & Cherezov, V., Sep 1 2015, In : IUCrJ. 2, p. 545-551 7 p.

Research output: Contribution to journalArticle

Crystallography
crystallography
Microcrystals
proteins
Proteins
7 Citations (Scopus)

Serial femtosecond X-ray diffraction of enveloped virus microcrystals

Lawrence, R. M., Conrad, C. E., Zatsepin, N., Grant, T. D., Liu, H., James, D., Nelson, G., Subramanian, G., Aquila, A., Hunter, M. S., Liang, M., Boutet, S., Coe, J., Spence, J., Weierstall, U., Liu, W., Fromme, P., Cherezov, V. & Hogue, B., Jul 1 2015, In : Structural Dynamics. 2, 4, 041720.

Research output: Contribution to journalArticle

Microcrystals
microcrystals
viruses
Viruses
X ray diffraction
17 Citations (Scopus)

Solving protein nanocrystals by cryo-EM diffraction: Multiple scattering artifacts

Subramanian, G., Basu, S., Liu, H., Zuo, J. M. & Spence, J., Jan 1 2015, In : Ultramicroscopy. 148, p. 87-93 7 p.

Research output: Contribution to journalArticle

Multiple scattering
Nanocrystals
artifacts
nanocrystals
Diffraction