• 1269 Citations
  • 21 h-Index
19992021
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Research Output 1999 2019

  • 1269 Citations
  • 21 h-Index
  • 65 Article
  • 4 Patent
  • 2 Conference contribution
  • 1 Chapter
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Article
2019

Delta-S-Cys-Albumin: A Lab Test that Quantifies Cumulative Exposure of Archived Human Blood Plasma and Serum Samples to Thawed Conditions

Jeffs, J. W., Jehanathan, N., Thibert, S. M. F., Ferdosi, S., Pham, L., Wilson, Z. T., Breburda, C. & Borges, C. R., Oct 1 2019, In : Molecular & cellular proteomics : MCP. 18, 10, p. 2121-2137 17 p.

Research output: Contribution to journalArticle

Open Access
Albumins
Blood
Plasmas
Serum
Serum Albumin

Diagnostic and Prognostic Performance of Blood Plasma Glycan Features in the Women Epidemiology Lung Cancer (WELCA) Study

Hu, Y., Ferdosi, S., Kapuruge, E. P., Diaz De Leon, J. A., Stücker, I., Radoï, L., Guénel, P. & Borges, C. R., Jan 1 2019, (Accepted/In press) In : Journal of Proteome Research.

Research output: Contribution to journalArticle

Epidemiology
Polysaccharides
Lung Neoplasms
Blood
Plasmas
2018
3 Citations (Scopus)

Behavior of blood plasma glycan features in bladder cancer

Ferdosi, S., Ho, T. H., Castle, E. P., Stanton, M. L. & Borges, C., Jul 1 2018, In : PLoS One. 13, 7, e0201208.

Research output: Contribution to journalArticle

blood plasma
Urinary Bladder Neoplasms
Polysaccharides
Blood
polysaccharides
3 Citations (Scopus)

Selective Deletion of Heparan Sulfotransferase Enzyme, Ndst1, in Donor Endothelial and Myeloid Precursor Cells Significantly Decreases Acute Allograft Rejection

Chen, H., Ambadapadi, S., Wakefield, D., Bartee, M., Yaron, J. R., Zhang, L., Archer-Hartmann, S. A., Azadi, P., Burgin, M., Borges, C., Zheng, D., Ergle, K., Muppala, V., Morshed, S., Rand, K., Clapp, W., Proudfoot, A. & Lucas, A., Dec 1 2018, In : Scientific Reports. 8, 1, 13433.

Research output: Contribution to journalArticle

Sulfotransferases
Myeloid Cells
Allografts
Tissue Donors
Chemokines
4 Citations (Scopus)

Stage Dependence, Cell-Origin Independence, and Prognostic Capacity of Serum Glycan Fucosylation, β1-4 Branching, β1-6 Branching, and α2-6 Sialylation in Cancer

Ferdosi, S., Rehder, D. S., Maranian, P., Castle, E. P., Ho, T. H., Pass, H. I., Cramer, D. W., Anderson, K., Fu, L., Cole, D. E. C., Le, T., Wu, X. & Borges, C., Jan 5 2018, In : Journal of Proteome Research. 17, 1, p. 543-558 16 p.

Research output: Contribution to journalArticle

Polysaccharides
Plasmas
Serum
Neoplasms
Lung Neoplasms
2017
11 Citations (Scopus)

A spin column-free approach to sodium hydroxide-based glycan permethylation

Hu, Y. & Borges, C., Aug 7 2017, In : Analyst. 142, 15, p. 2748-2759 12 p.

Research output: Contribution to journalArticle

Sodium Hydroxide
hydroxide
Polysaccharides
Sodium
sodium
4 Citations (Scopus)

Bacterial expression, correct membrane targeting and functional folding of the HIV-1 membrane protein Vpu using a periplasmic signal peptide

Deb, A., Johnson, W. A., Kline, A. P., Scott, B. J., Meador, L. R., Srinivas, D., Martin-Garcia, J. M., Dörner, K., Borges, C., Misra, R., Hogue, B., Fromme, P. & Leket-Mor, T., Feb 1 2017, In : PLoS One. 12, 2, e0172529.

Research output: Contribution to journalArticle

viral proteins
Viral Proteins
Protein Sorting Signals
Human immunodeficiency virus 1
signal peptide
1 Citation (Scopus)

Chicken albumin exhibits natural resistance to glycation

Zuck, J., Borges, C., Braun, E. J. & Sweazea, K., Jan 1 2017, In : Comparative Biochemistry and Physiology Part - B: Biochemistry and Molecular Biology. 203, p. 108-114 7 p.

Research output: Contribution to journalArticle

Innate Immunity
Albumins
Chickens
Glucose
Temperature
4 Citations (Scopus)

Ex vivo instability of glycated albumin: A role for autoxidative glycation

Jeffs, J. W., Ferdosi, S., Yassine, H. N. & Borges, C., Sep 1 2017, In : Archives of Biochemistry and Biophysics. 629, p. 36-42 7 p.

Research output: Contribution to journalArticle

Temperature
Albumins
Bearings (structural)
Atmospheric composition
Plasmas
Raptors
Strigiformes
Birds
Blood Proteins
Antioxidants
2016
5 Citations (Scopus)

Development of quantitative mass spectrometric immunoassay for serum amyloid A

Trenchevska, O., Yassine, H. N., Borges, C., Nelson, R. W. & Nedelkov, D., Jul 22 2016, (Accepted/In press) In : Biomarkers. p. 1-9 9 p.

Research output: Contribution to journalArticle

Serum Amyloid A Protein
Immunoassay
Proteins
9 Citations (Scopus)

Electronic single-molecule identification of carbohydrate isomers by recognition tunnelling

Im, J. O., Biswas, S., Liu, H., Zhao, Y., Sen, S., Biswas, S., Ashcroft, B., Borges, C., Wang, X., Lindsay, S. & Zhang, P., Dec 21 2016, In : Nature Communications. 7, 13868.

Research output: Contribution to journalArticle

carbohydrates
sugars
Sugars
Isomers
Polysaccharides
7 Citations (Scopus)

Glycan node analysis: A bottom-up approach to glycomics

Zaare, S., Aguilar, J. S., Hu, Y., Ferdosi, S. & Borges, C., May 22 2016, In : Journal of Visualized Experiments. 2016, 111, e53961.

Research output: Contribution to journalArticle

Glycomics
Sugar Alcohols
Polysaccharides
Glycosyltransferases
Hexoses
3 Citations (Scopus)

Glycan structure of Gc Protein-derived Macrophage Activating Factor as revealed by mass spectrometry

Borges, C. & Rehder, D. S., Sep 15 2016, In : Archives of Biochemistry and Biophysics. 606, p. 1-13 13 p.

Research output: Contribution to journalArticle

Macrophage-Activating Factors
Mass spectrometry
Polysaccharides
Mass Spectrometry
Galactosidases
6 Citations (Scopus)

Universal Readers Based on Hydrogen Bonding or π-π Stacking for Identification of DNA Nucleotides in Electron Tunnel Junctions

Biswas, S., Sen, S., Im, J. O., Biswas, S., Krstic, P., Ashcroft, B., Borges, C., Zhao, Y., Lindsay, S. & Zhang, P., Dec 27 2016, In : ACS Nano. 10, 12, p. 11304-11316 13 p.

Research output: Contribution to journalArticle

Tunnel junctions
nucleotides
readers
Nucleotides
tunnel junctions
2015
6 Citations (Scopus)

A multidisciplinary biospecimen bank of renal cell carcinomas compatible with discovery platforms at Mayo Clinic, Scottsdale, Arizona

Ho, T. H., Nateras, R. N., Yan, H., Park, J., Jensen, S., Borges, C., Lee, J. H., Champion, M. D., Tibes, R., Bryce, A. H., Carballido, E. M., Todd, M. A., Joseph, R. W., Wong, W. W., Parker, A. S., Stanton, M. L. & Castle, E. P., Jul 16 2015, In : PLoS One. 10, 7, e0132831.

Research output: Contribution to journalArticle

kidney cells
Renal Cell Carcinoma
carcinoma
Cells
RNA
2 Citations (Scopus)

Characterization of additional vitamin D binding protein variants

Fu, L., Borges, C., Rehder, D. S., Wong, B. Y. L., Williams, R., Carpenter, T. O. & Cole, D. E. C., Jun 15 2015, (Accepted/In press) In : Journal of Steroid Biochemistry and Molecular Biology.

Research output: Contribution to journalArticle

Vitamin D-Binding Protein
Mutant Proteins
Exons
Screening
Cysteine
7 Citations (Scopus)

Click Addition of a DNA Thread to the N-Termini of Peptides for Their Translocation through Solid-State Nanopores

Biswas, S., Song, W., Borges, C., Lindsay, S. & Zhang, P., Sep 12 2015, In : ACS Nano. 9, 10, p. 9652-9664 13 p.

Research output: Contribution to journalArticle

Nanopores
threads
Peptides
peptides
DNA
19 Citations (Scopus)

Ebselen inhibits QSOX1 enzymatic activity and suppresses invasion of pancreatic and renal cancer cell lines

Hanavan, P. D., Borges, C., Katchman, B. A., Faigel, D. O., Ho, T. H., Ma, C. T., Sergienko, E. A., Meurice, N., Petit, J. L. & Lake, D., 2015, In : Oncotarget. 6, 21, p. 18418-18428 11 p.

Research output: Contribution to journalArticle

Kidney Neoplasms
Pancreatic Neoplasms
Cell Line
Neoplasms
Heterografts
13 Citations (Scopus)

Gamma-carboxylation and fragmentation of osteocalcin in human serum defined by mass spectrometry

Rehder, D. S., Gundberg, C. M., Booth, S. L. & Borges, C., Jun 1 2015, In : Molecular and Cellular Proteomics. 14, 6, p. 1546-1555 10 p.

Research output: Contribution to journalArticle

Carboxylation
Osteocalcin
Mass spectrometry
Mass Spectrometry
Vitamin K
15 Citations (Scopus)

Serum amyloid A truncations in type 2 diabetes mellitus

Yassine, H. N., Trenchevska, O., He, H., Borges, C., Nedelkov, D., Mack, W., Kono, N., Koska, J., Reaven, P. D. & Nelson, R. W., Jan 1 2015, In : PLoS One. 10, 1, e0115320.

Research output: Contribution to journalArticle

Serum Amyloid A Protein
amyloid
Medical problems
noninsulin-dependent diabetes mellitus
Type 2 Diabetes Mellitus
2014
12 Citations (Scopus)

Elevated plasma albumin and apolipoprotein A-I oxidation under suboptimal specimen storage conditions

Borges, C., Rehder, D. S., Jensen, S., Schaab, M. R., Sherma, N. D., Yassine, H., Nikolova, B. & Breburda, C., 2014, In : Molecular and Cellular Proteomics. 13, 7, p. 1890-1899 10 p.

Research output: Contribution to journalArticle

Apolipoprotein A-I
Serum Albumin
Albumins
Oxidation
Methionine
19 Citations (Scopus)

Mass Spectrometric Immunoassay for the qualitative and quantitative analysis of the cytokine Macrophage Migration Inhibitory Factor (MIF)

Sherma, N. D., Borges, C., Trenchevska, O., Jarvis, J. W., Rehder, D. S., Oran, P. E., Nelson, R. W. & Nedelkov, D., 2014, In : Proteome Science. 12, 1, 52.

Research output: Contribution to journalArticle

Macrophage Migration-Inhibitory Factors
Immunoassay
Assays
Cytokines
Chemical analysis
9 Citations (Scopus)

Oxidative protein folding: Nature's knotty challenge

Borges, C. & Lake, D., Jul 20 2014, In : Antioxidants and Redox Signaling. 21, 3, p. 392-395 4 p.

Research output: Contribution to journalArticle

Protein folding
Protein Folding
Disulfides
Oxidation-Reduction
Proteins
29 Citations (Scopus)

Parallel workflow for high-throughput (>1,000 samples/day) quantitative analysis of human insulin-like growth factor 1 using mass spectrometric immunoassay

Oran, P. E., Trenchevska, O., Nedelkov, D., Borges, C., Schaab, M. R., Rehder, D. S., Jarvis, J. W., Sherma, N. D., Shen, L., Krastins, B., Lopez, M. F., Schwenke, D. C., Reaven, P. D. & Nelson, R. W., Mar 24 2014, In : PLoS One. 9, 3, e92801.

Research output: Contribution to journalArticle

Workflow
somatomedins
Somatomedins
immunoassays
Immunoassay
98 Citations (Scopus)

Single-molecule spectroscopy of amino acids and peptides by recognition tunnelling

Zhao, Y., Ashcroft, B., Zhang, P., Liu, H., Sen, S., Song, W., Im, J., Gyarfas, B., Manna, S., Biswas, S., Borges, C. & Lindsay, S., 2014, In : Nature Nanotechnology. 9, 6, p. 466-473 8 p.

Research output: Contribution to journalArticle

Peptides
peptides
amino acids
Amino acids
Spectroscopy
11 Citations (Scopus)

Techniques for the analysis of cysteine sulfhydryls and oxidative protein folding

Borges, C. & Sherma, N. D., Jul 20 2014, In : Antioxidants and Redox Signaling. 21, 3, p. 511-531 21 p.

Research output: Contribution to journalArticle

Protein folding
Protein Folding
Disulfides
Cysteine
Proteins
15 Citations (Scopus)

The application of multiple reaction monitoring and multi-analyte profiling to HDL proteins

Yassine, H. N., Jackson, A. M., Borges, C., Billheimer, D., Koh, H., Smith, D., Reaven, P., Lau, S. S. & Borchers, C. H., Jan 8 2014, In : Lipids in Health and Disease. 13, 1, 8.

Research output: Contribution to journalArticle

Monitoring
Proteins
Medical problems
Cardiovascular Diseases
Throughput
2013
35 Citations (Scopus)

Mass spectrometric immunoassay and MRM as targeted MS-based quantitative approaches in biomarker development: Potential applications to cardiovascular disease and diabetes

Yassine, H., Borges, C., Schaab, M. R., Billheimer, D., Stump, C., Reaven, P., Lau, S. S. & Nelson, R., Aug 2013, In : Proteomics - Clinical Applications. 7, 7-8, p. 528-540 13 p.

Research output: Contribution to journalArticle

Biomarkers
Medical problems
Immunoassay
Type 2 Diabetes Mellitus
Cardiovascular Diseases
7 Citations (Scopus)

Multiplexed surrogate analysis of glycotransferase activity in whole biospecimens

Borges, C., Rehder, D. S. & Boffetta, P., Mar 5 2013, In : Analytical Chemistry. 85, 5, p. 2927-2936 10 p.

Research output: Contribution to journalArticle

Polysaccharides
alpha-1,3-mannosylglycoprotein beta-1,4-N-acetylglucosaminyltransferase
Plasmas
Methylation
Monosaccharides
2012
21 Citations (Scopus)

Revealing the allosterome: Systematic identification of metabolite-protein interactions

Orsak, T., Smith, T. L., Eckert, D., Lindsley, J. E., Borges, C. & Rutter, J., Jan 10 2012, In : Biochemistry. 51, 1, p. 225-232 8 p.

Research output: Contribution to journalArticle

Metabolites
Proteins
Palmitates
Fatty Acids
Glucokinase
2011
20 Citations (Scopus)

Building multidimensional biomarker views of type 2 diabetes on the basis of protein microheterogeneity

Borges, C., Oran, P. E., Buddi, S., Jarvis, J. W., Schaab, M. R., Rehder, D. S., Rogers, S. P., Taylor, T. & Nelson, R. W., May 2011, In : Clinical Chemistry. 57, 5, p. 719-728 10 p.

Research output: Contribution to journalArticle

Biomarkers
Medical problems
Type 2 Diabetes Mellitus
Cardiovascular Diseases
Proteins
25 Citations (Scopus)

Mass spectrometric immunoassay of intact insulin and related variants for population proteomics studies

Oran, P. E., Jarvis, J. W., Borges, C., Sherma, N. D. & Nelson, R. W., Aug 2011, In : Proteomics - Clinical Applications. 5, 7-8, p. 454-459 6 p.

Research output: Contribution to journalArticle

Immunoassay
Proteomics
Insulin
Population
Assays
31 Citations (Scopus)

Mass spectrometric immunoassay revisited

Nelson, R. W. & Borges, C., Jun 2011, In : Journal of the American Society for Mass Spectrometry. 22, 6, p. 960-968 9 p.

Research output: Contribution to journalArticle

Biological Science Disciplines
Immunoassay
Ionization
Mass spectrometry
Desorption
35 Citations (Scopus)

RNA-protein binding interface in the telomerase ribonucleoprotein

Bley, C. J., Qi, X., Rand, D. P., Borges, C., Nelson, R. W. & Chen, J., Dec 20 2011, In : Proceedings of the National Academy of Sciences of the United States of America. 108, 51, p. 20333-20338 6 p.

Research output: Contribution to journalArticle

Ribonucleoproteins
RNA-Binding Proteins
Telomerase
RNA
Oryzias
2010
10 Citations (Scopus)

C-peptide microheterogeneity in type 2 diabetes populations

Oran, P. E., Jarvis, J. W., Borges, C. & Nelson, R. W., Jan 2010, In : Proteomics - Clinical Applications. 4, 1, p. 106-111 6 p.

Research output: Contribution to journalArticle

C-Peptide
Medical problems
Type 2 Diabetes Mellitus
Population
Dipeptidyl Peptidase 4
80 Citations (Scopus)

Cysteine sulfenic acid as an intermediate in disulfide bond formation and nonenzymatic protein folding

Rehder, D. S. & Borges, C., Sep 7 2010, In : Biochemistry. 49, 35, p. 7748-7755 8 p.

Research output: Contribution to journalArticle

Protein folding
Protein Folding
Disulfides
Cysteine
Proteins
28 Citations (Scopus)

Full-length characterization of proteins in human populations

Borges, C., Rehder, D. S., Jarvis, J. W., Schaab, M. R., Oran, P. E. & Nelson, R. W., Feb 1 2010, In : Clinical Chemistry. 56, 2, p. 202-211 10 p.

Research output: Contribution to journalArticle

Population
Vitamin D-Binding Protein
Proteins
Genotype
Proteomics
16 Citations (Scopus)

Intrapersonal and populational heterogeneity of the chemokine RANTES

Oran, P. E., Sherma, N. D., Borges, C., Jarvis, J. W. & Nelson, R. W., Sep 2010, In : Clinical Chemistry. 56, 9, p. 1432-1441 10 p.

Research output: Contribution to journalArticle

T-cells
Chemokines
Chemical activation
T-Lymphocytes
Immunoassay
19 Citations (Scopus)
Proteins
Plasma (human)
cysteinesulfenic acid
Electrospray ionization
Prealbumin
90 Citations (Scopus)

Selected reaction monitoring-mass spectrometric immunoassay responsive to parathyroid hormone and related variants

Lopez, M. F., Rezai, T., Sarracino, D. A., Prakash, A., Krastins, B., Athanas, M., Singh, R. J., Barnidge, D. R., Oran, P., Borges, C. & Nelson, R. W., Feb 1 2010, In : Clinical Chemistry. 56, 2, p. 281-290 10 p.

Research output: Contribution to journalArticle

Parathyroid Hormone
Immunoassay
Monitoring
Assays
Peptides
2009
33 Citations (Scopus)

Glycosylation status of vitamin D binding protein in cancer patients

Rehder, D. S., Nelson, R. W. & Borges, C., Oct 2009, In : Protein Science. 18, 10, p. 2036-2042 7 p.

Research output: Contribution to journalArticle

Vitamin D-Binding Protein
Glycosylation
Macrophage-Activating Factors
Trisaccharides
Carrier Proteins
2008
15 Citations (Scopus)

Population studies of intact vitamin D binding protein by affinity capture ESI-TOF-MS

Borges, C., Jarvis, J. W., Oran, P. E., Rogers, S. P. & Nelson, R. W., Jul 2008, In : Journal of Biomolecular Techniques. 19, 3, p. 167-176 10 p.

Research output: Contribution to journalArticle

Vitamin D-Binding Protein
Blood Proteins
Population
Electrospray Ionization Mass Spectrometry
Immunoassay
39 Citations (Scopus)

Population studies of vitamin D binding protein microheterogeneity by mass spectrometry lead to characterization of its genotype-dependent O-glycosylation patterns

Borges, C., Jarvis, J. W., Oran, P. E. & Nelson, R. W., Sep 2008, In : Journal of Proteome Research. 7, 9, p. 4143-4153 11 p.

Research output: Contribution to journalArticle

Vitamin D-Binding Protein
Glycosylation
Trisaccharides
Mass spectrometry
Mass Spectrometry
2007
22 Citations (Scopus)

Analysis of a challenging subset of world anti-doping agency-banned steroids and antiestrogens by LC-MS-MS

Borges, C., Miller, N., Shelby, M., Hansen, M., White, C., Slawson, M. H., Monti, K. & Crouch, D. J., Apr 2007, In : Journal of Analytical Toxicology. 31, 3, p. 125-131 7 p.

Research output: Contribution to journalArticle

Estrogen Receptor Modulators
steroid
Mass spectrometry
Steroids
Doping (additives)
6 Citations (Scopus)
Ions
Principal component analysis
Screening
Inspection
6 Citations (Scopus)

Detection of bumetanide in an over-the-counter dietary supplement

Hoggan, A. M., Shelby, M. K., Crouch, D. J., Borges, C. & Slawson, M. H., Nov 2007, In : Journal of Analytical Toxicology. 31, 9, p. 601-604 4 p.

Research output: Contribution to journalArticle

Dietary supplements
Bumetanide
Dietary Supplements
urine
mass spectrometry
2005
Biochemistry
Disulfides
Transforming Growth Factor beta
Cysteine
4 Citations (Scopus)

Structure and mechanism of formation of an important ion in doping control

Borges, C., Taccogno, J., Crouch, D. J., Le, L. & Truong, T. N., Dec 1 2005, In : International Journal of Mass Spectrometry. 247, 1-3, p. 48-54 7 p.

Research output: Contribution to journalArticle

Doping (additives)
Ions
ions
steroids
Dihydrotestosterone