Research Output 1976 2018

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2018

A new niche for anoxygenic phototrophs as endoliths

Roush, D., Couradeau, E., Guida, B., Neuer, S. & Garcia-Pichel, F. Feb 1 2018 In : Applied and Environmental Microbiology. 84, 4, e02055-17

Research output: Contribution to journalArticle

photosynthetic bacteria
autotrophs
niche
niches
Bacteria

Building effective fishery ecosystem plans

Levin, P. S., Essington, T. E., Marshall, K. N., Koehn, L. E., Anderson, L. G., Bundy, A., Carothers, C., Coleman, F., Gerber, L. R., Grabowski, J. H., Houde, E., Jensen, O. P., Möllmann, C., Rose, K., Sanchirico, J. N. & Smith, A. D. M. Jan 1 2018 (Accepted/In press) In : Marine Policy.

Research output: Contribution to journalArticle

fishery
fisheries
fishery management
fisheries management
ecosystems

Can Six Minutes of Culturally Competent Evolution Education Reduce Students' Level of Perceived Conflict between Evolution and Religion?

Truong, J. M., Barnes, M. E. & Brownell, S. E. Feb 1 2018 In : American Biology Teacher. 80, 2, p. 106-115 10 p.

Research output: Contribution to journalArticle

religion
Religion
education
students
Students

China's new rural “separating three property rights” land reform results in grassland degradation: Evidence from Inner Mongolia

Li, A., Wu, J., Zhang, X., Xue, J., Liu, Z., Han, X. & Huang, J. Feb 1 2018 In : Land Use Policy. 71, p. 170-182 13 p.

Research output: Contribution to journalArticle

land reform
property rights
Mongolia
agrarian reform
right of ownership

Clade and strain specific contributions of Synechococcus and Prochlorococcus to carbon export in the Sargasso Sea

De Martini, F., Neuer, S., Hamill, D., Robidart, J. & Lomas, M. W. Jan 1 2018 (Accepted/In press) In : Limnology and Oceanography.

Research output: Contribution to journalArticle

Sargasso Sea
Prochlorococcus
Synechococcus
particulate organic carbon
carbon flux

Coalescent processes with skewed offspring distributions and nonequilibrium demography

Matuszewski, S., Hildebrandt, M. E., Achaz, G. & Jensen, J. D. Jan 1 2018 In : Genetics. 208, 1, p. 323-338 16 p.

Research output: Contribution to journalArticle

Demography
Genealogy and Heraldry
Population Growth
Ecology
Sequence Analysis

Colony personality and plant health in the Azteca-Cecropia mutualism

Marting, P. R., Wcislo, W. T. & Pratt, S. C. Jan 1 2018 In : Behavioral Ecology. 29, 1, p. 264-271 8 p.

Research output: Contribution to journalArticle

Neotropic Ecozone
Azteca
plant-insect interaction
Cecropia
plant-insect relations

Comparative Genomics Reveals Accelerated Evolution in Conserved Pathways during the Diversification of Anole Lizards

Tollis, M. , Hutchins, E. D. , Stapley, J. , Rupp, S. M. , Eckalbar, W. L. , Maayan, I. , Lasku, E. , Infante, C. R. , Dennis, S. R. , Robertson, J. A. , May, C. M. , Crusoe, M. R. , Bermingham, E. , Denardo, D. F. , Hsieh, S. T. T. , Kulathinal, R. J. , McMillan, W. O. , Menke, D. B. , Pratt, S. C. , Rawls, J. A. & 5 others Sanjur, O., Wilson-Rawls, J., Wilson Sayres, M. A., Fisher, R. E. & Kusumi, K. Feb 1 2018 In : Genome Biology and Evolution. 10, 2, p. 489-506 18 p.

Research output: Contribution to journalArticle

Anolis
Lizards
Molecular Evolution
Genomics
lizard

Detection and Characterization of Streptomycin Resistance (strA-strB) in a Honeybee Gut Symbiont (Snodgrassella alvi) and the Associated Risk of Antibiotic Resistance Transfer

Ludvigsen, J., Amdam, G. V., Rudi, K. & L’Abée-Lund, T. M. Mar 8 2018 (Accepted/In press) In : Microbial Ecology. p. 1-4 4 p.

Research output: Contribution to journalArticle

antibiotic resistance
honeybee
streptomycin
symbiont
symbionts
urban morphology
urban sprawl
air pollution
Air pollution
atmospheric pollution
1 Citations

Ecosystem-Based Fisheries Management for Social–Ecological Systems: Renewing the Focus in the United States with Next Generation Fishery Ecosystem Plans

Marshall, K. N., Levin, P. S., Essington, T. E., Koehn, L. E., Anderson, L. G., Bundy, A., Carothers, C., Coleman, F., Gerber, L. R., Grabowski, J. H., Houde, E., Jensen, O. P., Möllmann, C., Rose, K., Sanchirico, J. N. & Smith, A. D. M. Jan 1 2018 In : Conservation Letters. 11, 1, e12367

Research output: Contribution to journalArticle

fishery management
fisheries management
fishery
fisheries
ecosystems

Groundwater recharge in desert playas: Current rates and future effects of climate change

McKenna, O. P. & Sala, O. E. Jan 1 2018 In : Environmental Research Letters. 13, 1, 014025

Research output: Contribution to journalArticle

Hydrogeology
precipitation (climatology)
Groundwater resources
Arid regions
Climate Change

Homogenization of plant diversity, composition, and structure in North American urban yards

Pearse, W. D., Cavender-Bares, J., Hobbie, S. E., Avolio, M. L., Bettez, N., Roy Chowdhury, R., Darling, L. E., Groffman, P. M., Grove, J. M., Hall, S. J., Heffernan, J. B., Learned, J., Neill, C., Nelson, K. C., Pataki, D. E., Ruddell, B. L., Steele, M. K. & Trammell, T. L. E. Feb 1 2018 In : Ecosphere. 9, 2, e02105

Research output: Contribution to journalArticle

dry environmental conditions
aridity
homogenization
ecosystem service
ecosystem services
1 Citations
nature-society relations
Food supply
Least squares approximations
Climate models
Thermistors

How does habitat fragmentation affect the biodiversity and ecosystem functioning relationship?

Liu, J., Wilson, M., Hu, G., Liu, J., Wu, J. & Yu, M. Mar 1 2018 In : Landscape Ecology. 33, 3, p. 341-352 12 p.

Research output: Contribution to journalArticle

habitat fragmentation
biodiversity
fragmentation
habitat
ecosystem
Wellheads
Health risks
wellhead
Water treatment
Potable water

Identification of satellite cells from anole lizard skeletal muscle and demonstration of expanded musculoskeletal potential

Palade, J., Djordjevic, D., Hutchins, E. D., George, R. M., Cornelius, J. A., Rawls, A., Ho, J. W. K., Kusumi, K. & Wilson-Rawls, J. Jan 15 2018 In : Developmental Biology. 433, 2, p. 344-356 13 p.

Research output: Contribution to journalArticle

Lizards
Skeletal Muscle
Transcriptome
Genes
Cartilage

Impacts of future urban expansion on summer climate and heat-related human health in eastern China

Cao, Q., Yu, D., Georgescu, M., Wu, J. & Wang, W. Mar 1 2018 In : Environment International. 112, p. 134-146 13 p.

Research output: Contribution to journalArticle

climate effect
urban growth
climate
summer
warming

Incomplete Co-cladogenesis between Zootermopsis Termites and Their Associated Protists

Taerum, S. J., De Martini, F., Liebig, J. & Gile, G. H. Feb 8 2018 In : Environmental Entomology. 47, 1, p. 184-195 12 p.

Research output: Contribution to journalArticle

Zootermopsis
protist
termite
Isoptera
Termopsidae

Increased survival of honeybees in the laboratory after simultaneous exposure to low doses of pesticides and bacteria

Dickel, F., Münch, D., Amdam, G. V., Mappes, J. & Freitak, D. Jan 1 2018 In : PLoS ONE. 13, 1, e0191256

Research output: Contribution to journalArticle

thiazines
Gear cutting
Thiazines
Hormesis
Pollination

Linking models of human behaviour and climate alters projected climate change

Beckage, B., Gross, L. J., Lacasse, K., Carr, E., Metcalf, S. S., Winter, J. M., Howe, P. D., Fefferman, N., Franck, T., Zia, A., Kinzig, A. & Hoffman, F. M. Jan 1 2018 In : Nature Climate Change. 8, 1, p. 79-84 6 p.

Research output: Contribution to journalArticle

human behavior
climate change
climate
extreme event
climate modeling

Measuring behavioral thermal tolerance to address hot topics in ecology, evolution, and conservation

Camacho, A., Rusch, T., Ray, G., Telemeco, R. S., Rodrigues, M. T. & Angilletta, M. J. Apr 1 2018 In : Journal of Thermal Biology. 73, p. 71-79 9 p.

Research output: Contribution to journalArticle

Body Temperature Regulation
thermoregulation
Ecology
heat tolerance
breathing

Modeling the subclonal evolution of cancer cell populations

Chowell, D., Napier, J., Gupta, R., Anderson, K. S., Maley, C. C. & Wilson Sayres, M. A. Feb 1 2018 In : Cancer Research. 78, 3, p. 830-839 10 p.

Research output: Contribution to journalArticle

Population
Neoplasms
Clone Cells
Genetic Drift
Mutation

Mycoplasma-related endobacteria within Mortierellomycotina fungi: diversity, distribution and functional insights into their lifestyle

Desirò, A., Hao, Z., Liber, J. A., Benucci, G. M. N., Lowry, D., Roberson, R. & Bonito, G. Feb 23 2018 (Accepted/In press) In : ISME Journal. p. 1-15 15 p.

Research output: Contribution to journalArticle

Mycoplasma
lifestyle
endosymbiont
Life Style
Fungi

Neuronal RNA-binding protein HuD regulates addiction-related gene expression and behavior

Oliver, R. J., Brigman, J. L., Bolognani, F., Allan, A. M., Neisewander, J. L. & Perrone-Bizzozero, N. I. Jan 1 2018 (Accepted/In press) In : Genes, Brain and Behavior.

Research output: Contribution to journalArticle

RNA-Binding Proteins
Brain-Derived Neurotrophic Factor
Nucleus Accumbens
Cocaine
Gene Expression

OpenBiodiv-O: Ontology of the OpenBiodiv knowledge management system

Senderov, V., Simov, K., Franz, N., Stoev, P., Catapano, T., Agosti, D., Sautter, G., Morris, R. A. & Penev, L. Jan 18 2018 In : Journal of Biomedical Semantics. 9, 1, 5

Research output: Contribution to journalArticle

Strigiformes
Knowledge Management
Biodiversity
Taxonomies
Knowledge management

Partitioning assimilatory nitrogen uptake in streams: an analysis of stable isotope tracer additions across continents

Tank, J. L. , Martí, E. , Riis, T. , von Schiller, D. , Reisinger, A. J. , Dodds, W. K. , Whiles, M. R. , Ashkenas, L. R. , Bowden, W. B. , Collins, S. M. , Crenshaw, C. L. , Crowl, T. A. , Griffiths, N. A. , Grimm, N. B. , Hamilton, S. K. , Johnson, S. L. , McDowell, W. H. , Norman, B. M. , Rosi, E. J. , Simon, K. S. & 2 others Thomas, S. A. & Webster, J. R. Feb 1 2018 In : Ecological Monographs. 88, 1, p. 120-138 19 p.

Research output: Contribution to journalArticle

isotope labeling
stable isotopes
stable isotope
partitioning
tracer

Phylogenetic patterns of trait and trait plasticity evolution: Insights from amphibian embryos

Relyea, R. A. , Stephens, P. R. , Barrow, L. N. , Blaustein, A. R. , Bradley, P. W. , Buck, J. C. , Chang, A. , Collins, J. P. , Crother, B. , Earl, J. , Gervasi, S. S. , Hoverman, J. T. , Hyman, O. , Lemmon, E. M. , Luhring, T. M. , Michelson, M. , Murray, C. , Price, S. , Semlitsch, R. D. , Sih, A. & 5 others Stoler, A. B., Vandenbroek, N., Warwick, A., Wengert, G. & Hammond, J. I. Jan 1 2018 (Accepted/In press) In : Evolution.

Research output: Contribution to journalArticle

Amphibians
amphibian
Cues
plasticity
amphibians

Proteogenomic Re-Annotation of Coccidioides posadasii Strain Silveira

Mitchell, N. M., Sherrard, A. L., Dasari, S., Magee, D. M., Grys, T. E. & Lake, D. F. Jan 1 2018 In : Proteomics. 18, 1, 1700173

Research output: Contribution to journalArticle

Coccidioides
Coccidioidomycosis
Genomics
Genome
Proteins

Pulsed flows, tributary inputs and food-web structure in a highly regulated river

Sabo, J. L., Caron, M., Doucett, R., Dibble, K. L., Ruhi, A., Marks, J. C., Hungate, B. A. & Kennedy, T. A. Jan 1 2018 (Accepted/In press) In : Journal of Applied Ecology.

Research output: Contribution to journalArticle

food web
tributary
dam
river
food chain

Reply to Glazier

Harrison, J. F. Jan 1 2018 (Accepted/In press) In : Trends in Ecology and Evolution.

Research output: Contribution to journalArticle

Substantial impacts of landscape changes on summer climate with major regional differences: The case of China

Cao, Q., Yu, D., Georgescu, M. & Wu, J. Jun 1 2018 In : Science of the Total Environment. 625, p. 416-427 12 p.

Research output: Contribution to journalArticle

nature-society relations
Weather forecasting
Geomorphology
Landforms
precipitation (climatology)

Summary of the first inaugural joint meeting of the International Consortium for scoliosis genetics and the International Consortium for vertebral anomalies and scoliosis, March 16–18, 2017, Dallas, Texas

Giampietro, P. F., Pourquie, O., Raggio, C., Ikegawa, S., Turnpenny, P. D., Gray, R., Dunwoodie, S. L., Gurnett, C. A., Alman, B., Cheung, K., Kusumi, K., Hadley-Miller, N. & Wise, C. A. Jan 1 2018 In : American Journal of Medical Genetics, Part A. 176, 1, p. 253-256 4 p.

Research output: Contribution to journalArticle

Scoliosis
Inborn Genetic Diseases
Spine
Research
Research Design

Synonymous Mutations at the Beginning of the Influenza A Virus Hemagglutinin Gene Impact Experimental Fitness

Canale, A. S., Venev, S. V., Whitfield, T. W., Caffrey, D. R., Marasco, W. A., Schiffer, C. A., Kowalik, T. F., Jensen, J. D., Finberg, R. W., Zeldovich, K. B., Wang, J. P. & Bolon, D. N. A. Apr 13 2018 In : Journal of Molecular Biology. 430, 8, p. 1098-1115 18 p.

Research output: Contribution to journalArticle

Influenza A virus
Hemagglutinins
Genes
Viral RNA
Swine

The Effect of the Post 2001 Reforms on FMD Risks of the International Live Animal Trade

Shanafelt, D. W. & Perrings, C. Feb 27 2018 (Accepted/In press) In : EcoHealth. p. 1-11 11 p.

Research output: Contribution to journalArticle

foot and mouth disease
Foot-and-Mouth Disease
international trade
Disease Management
trade-off

The glocal curriculum: A model for transnational collaboration in higher education for sustainable development

Caniglia, G., John, B., Bellina, L., Lang, D. J., Wiek, A., Cohmer, S. & Laubichler, M. D. Jan 10 2018 In : Journal of Cleaner Production. 171, p. 368-376 9 p.

Research output: Contribution to journalArticle

higher education
curriculum
Curricula
Sustainable development
sustainable development

The role of stakeholder perceptions and institutions for marine reserve efficacy in the Midriff Islands Region, Gulf of California, Mexico

Mancha-Cisneros, M. D. M., Suárez-Castillo, A. N., Torre, J., Anderies, J. M. & Gerber, L. R. Jan 1 2018 (Accepted/In press) In : Ocean and Coastal Management.

Research output: Contribution to journalArticle

marine park
Gulf of California
governance
infrastructure
stakeholders
Biological Sciences
Biological Science Disciplines
life science
need

Volatile molecules from bronchoalveolar lavage fluid can 'rule-in' Pseudomonas aeruginosa and 'rule-out' Staphylococcus aureus infections in cystic fibrosis patients

Nasir, M., Bean, H. D., Smolinska, A., Rees, C. A., Zemanick, E. T. & Hill, J. E. Dec 1 2018 In : Scientific Reports. 8, 1, 826

Research output: Contribution to journalArticle

Bronchoalveolar Lavage Fluid
Cystic Fibrosis
Pseudomonas aeruginosa
Staphylococcus aureus
Biomarkers
2017
7 Citations

50 years of the International Committee on Taxonomy of Viruses: progress and prospects

Adams, M. J. , Lefkowitz, E. J. , King, A. M. Q. , Harrach, B. , Harrison, R. L. , Knowles, N. J. , Kropinski, A. M. , Krupovic, M. , Kuhn, J. H. , Mushegian, A. R. , Nibert, M. L. , Sabanadzovic, S. , Sanfaçon, H. , Siddell, S. G. , Simmonds, P. , Varsani, A. , Zerbini, F. M. , Orton, R. J. , Smith, D. B. , Gorbalenya, A. E. & 1 others Davison, A. J. May 1 2017 In : Archives of Virology. 162, 5, p. 1441-1446 6 p.

Research output: Contribution to journalArticle

Viruses
Virology
Organized Financing
Anniversaries and Special Events
Organizations
1 Citations
Problem-Based Learning
Students
learning
experience
student

A call to develop course-based undergraduate research experiences (CUREs) for Nonmajors courses

Ballen, C. J., Blum, J. E., Brownell, S., Hebert, S., Hewlett, J., Klein, J. R., McDonald, E. A., Monti, D. L., Nold, S. C., Slemmons, K. E., Soneral, P. A. G. & Cotner, S. Jun 1 2017 In : CBE Life Sciences Education. 16, 2

Research output: Contribution to journalArticle

science
Research
experience
Practice Guidelines
best practice
2 Citations
Cultural Competency
Teaching
Education
Students
Religion
2 Citations

Activation of 5-HT1A receptors in the rat dorsomedial hypothalamus inhibits stress-induced activation of the hypothalamic–pituitary–adrenal axis

Stamper, C. E., Hassell, J. E., Kapitz, A. J., Renner, K. J., Orchinik, M. & Lowry, C. A. 2017 In : Stress. 20, 2, p. 223-230 8 p.

Research output: Contribution to journalArticle

8-Hydroxy-2-(di-n-propylamino)tetralin
Hypothalamus
Serotonin
Corticosterone
Microinjections

Adjuvant-mediated epitope specificity and enhanced neutralizing activity of antibodies targeting dengue virus envelope protein

Maeda, D. L. N. F., Batista, M. T., Pereira, L. R., de Jesus Cintra, M., Amorim, J. H., Mathias-Santos, C., Pereira, S. A., Boscardin, S. B., dos Ramos Silva, S., Faquim-Mauro, E. L., Silveira, V. B., Oliveira, D. B. L., Johnston, S. A., de Souza Ferreira, L. C. & Rodrigues, J. F. Sep 25 2017 In : Frontiers in Immunology. 8, SEP, 1175

Research output: Contribution to journalArticle

Viral Envelope Proteins
Dengue Virus
Neutralizing Antibodies
Epitopes
Glycoproteins

Agreeing to disagree: Reconciling conflicting taxonomic views using a logic-based approach

Cheng, Y. Y., Franz, N., Schneider, J., Yu, S., Rodenhausen, T. & Ludäscher, B. Jan 1 2017 In : Proceedings of the Association for Information Science and Technology. 54, 1, p. 46-56 11 p.

Research output: Contribution to journalArticle

Taxonomies
logic
taxonomy
Interoperability
Semantics

A heterologous prime-boosting strategy with replicating Vaccinia virus vectors and plant-produced HIV-1 Gag/dgp41 virus-like particles

Meador, L. R., Kessans, S. A., Kilbourne, J., Kibler, K. V., Pantaleo, G., Roderiguez, M. E., Blattman, J. N., Jacobs, B. L. & Mor, T. S. Jul 1 2017 In : Virology. 507, p. 242-256 15 p.

Research output: Contribution to journalArticle

Vaccinia virus
Virion
HIV-1
Epitopes
T-Lymphocytes
1 Citations

A larval ‘princess pheromone’ identifies future ant queens based on their juvenile hormone content

Penick, C. A. & Liebig, J. Jun 1 2017 In : Animal Behaviour. 128, p. 33-40 8 p.

Research output: Contribution to journalArticle

juvenile hormones
pheromone
queen insects
pheromones
hormone

A logic approach to modelling nomenclatural change

Franz, N. M., Zhang, C. & Lee, J. 2017 (Accepted/In press) In : Cladistics.

Research output: Contribution to journalArticle

nomenclature
modeling
type collections
type specimen
gender

Alternate modes of photosynthate transport in the alternating generations of physcomitrella patens

Regmi, K. C., Li, L. & Gaxiola, R. A. Nov 13 2017 In : Frontiers in Plant Science. 8, 1956

Research output: Contribution to journalArticle

Physcomitrella patens
photosynthates
sucrose synthase
mosses and liverworts
Physcomitrella