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2020

An expanded shale δ98Mo record permits recurrent shallow marine oxygenation during the Neoarchean

Ostrander, C. M., Kendall, B., Olson, S. L., Lyons, T. W., Gordon, G. W., Romaniello, S. J., Zheng, W., Reinhard, C. T., Roy, M. & Anbar, A. D., Jan 20 2020, In : Chemical Geology. 532, 119391.

Research output: Contribution to journalArticle

Bioreduction of nitrate in high-sulfate water using a hydrogen-based membrane biofilm reactor equipped with a separate carbon dioxide module

Xia, S., Wu, C., Yang, X., Zhou, Y., Zhou, L., Ran, Y. & Rittmann, B. E., Apr 1 2020, In : Chemical Engineering Journal. 385, 123831.

Research output: Contribution to journalArticle

Effect of ultra-violet exposure on production of mycosporine-like amino acids and lipids by Lyngbya purpurem

Chandra, R., Pons-Faudoa, F. P., Parra Saldívar, R. & Rittmann, B. E., Mar 2020, In : Biomass and Bioenergy. 134, 105475.

Research output: Contribution to journalArticle

Enhancing supervised bug localization with metadata and stack-trace

Wang, Y., Yao, Y., Tong, H., Huo, X., Li, M., Xu, F. & Lu, J., Jan 1 2020, (Accepted/In press) In : Knowledge and Information Systems.

Research output: Contribution to journalArticle

Expanding radiogenic strontium isotope baseline data for central Mexican paleomobility studies

Pacheco-Forés, S. I., Gordon, G. W. & Knudson, K. J., Jan 1 2020, In : PloS one. 15, 2, e0229687.

Research output: Contribution to journalArticle

Open Access

High Level Production of Monoclonal Antibodies Using an Optimized Plant Expression System

Diamos, A. G., Hunter, J. G. L., Pardhe, M. D., Rosenthal, S. H., Sun, H., Foster, B. C., DiPalma, M. P., Chen, Q. & Mason, H. S., Jan 17 2020, In : Frontiers in Bioengineering and Biotechnology. 7, 472.

Research output: Contribution to journalArticle

How nitrate affects perchlorate reduction in a methane-based biofilm batch reactor

Lv, P. L., Shi, L. D., Dong, Q. Y., Rittmann, B. & Zhao, H. P., Mar 15 2020, In : Water Research. 171, 115397.

Research output: Contribution to journalArticle

Immune protection is dependent on the gut microbiome in a lethal mouse gammaherpesviral infection

Yaron, J. R., Ambadapadi, S., Zhang, L., Chavan, R. N., Tibbetts, S. A., Keinan, S., Varsani, A., Maldonado, J., Kraberger, S., Tafoya, A. M., Bullard, W. L., Kilbourne, J., Stern-Harbutte, A., Krajmalnik-Brown, R., Munk, B. H., Koppang, E. O., Lim, E. S. & Lucas, A. R., Dec 1 2020, In : Scientific reports. 10, 1, 2371.

Research output: Contribution to journalArticle

Open Access

Influence of operating conditions on sulfate reduction from real mining process water by membrane biofilm reactors

Suárez, J. I., Aybar, M., Nancucheo, I., Poch, B., Martínez, P., Rittmann, B. E. & Schwarz, A., Apr 1 2020, In : Chemosphere. 244, 1 p.

Research output: Contribution to journalArticle

Magnetic nanoparticle recovery device (MagNERD) enables application of iron oxide nanoparticles for water treatment

Powell, C. D., Atkinson, A. J., Ma, Y., Marcos-Hernandez, M., Villagran, D., Westerhoff, P. & Wong, M. S., Jan 1 2020, In : Journal of Nanoparticle Research. 22, 2, 48.

Research output: Contribution to journalArticle

Mathematical Modeling and Analysis of Wastewater Treatment Plant Using the Cannibal Process

Xiong, J., Young, M. N., Marcus, A. K., Van Ginkel, S. W. & Rittmann, B. E., Feb 1 2020, In : Journal of Environmental Engineering (United States). 146, 2, 04019108.

Research output: Contribution to journalArticle

Missing information imputation for disease-dedicated social networks with heterogeneous auxiliary data

Liu, X., He, J., Min, W. & Yang, H., Jan 1 2020, (Accepted/In press) In : IISE Transactions on Healthcare Systems Engineering.

Research output: Contribution to journalArticle

Modeling Trichloroethene Reduction, Methanogenesis, and Homoacetogenesis in a H 2 -Based Biofilm

Wang, B., Krajmalnik-Brown, R., Zhou, C., Luo, Y., Rittmann, B. E. & Tang, Y., Feb 1 2020, In : Journal of Environmental Engineering (United States). 146, 2, 04019115.

Research output: Contribution to journalArticle

Novel nanovirus and associated alphasatellites identified in milk vetch plants with chlorotic dwarf disease in Iran

Hassan-Sheikhi, P., Heydarnejad, J., Massumi, H., Kraberger, S. & Varsani, A., Jan 15 2020, In : Virus research. 276, 1 p.

Research output: Contribution to journalArticle

Precise and Programmable Detection of Mutations Using Ultraspecific Riboregulators

Hong, F., Ma, D., Wu, K., Mina, L. A., Luiten, R. C., Liu, Y., Yan, H. & Green, A. A., Mar 5 2020, In : Cell. 180, 5, p. 1018-1032.e16

Research output: Contribution to journalArticle

Open Access

Roles of entropic and solvent damping forces in the dynamics of polymer tethered nanoparticles and implications for single molecule sensing

Ma, G., Wan, Z., Zhu, H. & Tao, N., Jan 1 2020, In : Chemical Science. 11, 5, p. 1283-1289 7 p.

Research output: Contribution to journalArticle

Open Access

Suppression of water-bloom cyanobacterium Microcystis aeruginosa by algaecide hydrogen peroxide maximized through programmed cell death

Zhou, T., Cao, H., Zheng, J., Teng, F., Wang, X., Lou, K., Zhang, X. & Tao, Y., Jul 5 2020, In : Journal of Hazardous Materials. 393, 122394.

Research output: Contribution to journalArticle

Symptom evolution following the emergence of maize streak virus

Monjane, A. L., Dellicour, S., Hartnady, P., Oyeniran, K. A., Owor, B. E., Bezeidenhout, M., Linderme, D., Syed, R. A., Donaldson, L., Murray, S., Rybicki, E. P., Kvarnheden, A., Yazdkhasti, E., Lefeuvre, P., Froissart, R., Roumagnac, P., Shepherd, D. N., Harkins, G. W., Suchard, M. A., Lemey, P. & 2 others, Varsani, A. & Martin, D. P., Jan 2020, In : eLife. 9, e51984.

Research output: Contribution to journalArticle

Open Access

The complex puzzle of dietary silver nanoparticles, mucus and microbiota in the gut

Bi, Y., Marcus, A. K., Robert, H., Krajmalnik-Brown, R., Rittmann, B. E., Westerhoff, P., Ropers, M. H. & Mercier-Bonin, M., Jan 1 2020, (Accepted/In press) In : Journal of Toxicology and Environmental Health - Part B: Critical Reviews.

Research output: Contribution to journalArticle

Towards a simultaneous combination of ozonation and biodegradation for enhancing tetracycline decomposition and toxicity elimination

Su, Y., Wang, X., Dong, S., Fu, S., Zhou, D. & Rittmann, B. E., May 2020, In : Bioresource Technology. 304, 123009.

Research output: Contribution to journalArticle

Unveiling the deformation behavior and strengthening mechanisms of Al3BC/Al composites via in-situ micropillar compression

Zhao, Y., Singaravelu, A. S. S., Ma, X., Zhang, Q., Chang, S. L. Y., Liu, X. & Chawla, N., May 15 2020, In : Journal of Alloys and Compounds. 823, 153842.

Research output: Contribution to journalArticle

2019

60Co gamma ray damage in homoepitaxial β-Ga2O3 Schottky rectifiers

Yang, J., Koller, G. J., Fares, C., Ren, F., Pearton, S. J., Bae, J., Kim, J. & Smith, D., Jan 1 2019, In : ECS Journal of Solid State Science and Technology. 8, 7, p. Q3041-Q3045

Research output: Contribution to journalArticle

Open Access

A Bayesian Nonparametric Approach to Single Molecule Förster Resonance Energy Transfer

Sgouralis, I., Madaan, S., Djutanta, F., Kha, R., Hariadi, R. & Presse, S., Jan 24 2019, In : Journal of Physical Chemistry B. 123, 3, p. 675-688 14 p.

Research output: Contribution to journalArticle

3 Scopus citations

A broader view on jamming: from spring networks to circle packings

F. Hagh, V., Corwin, E. I., Stephenson, K. & Thorpe, M., Jan 1 2019, In : Soft Matter. 15, 15, p. 3076-3084 9 p.

Research output: Contribution to journalArticle

Acclimation of nitrifying biomass to phenol leads to persistent resistance to inhibition

Zou, S., Yan, N., Zhang, C., Zhou, Y., Wu, X., Wang, J., Liu, Y., Zhang, Y. & Rittmann, B., Nov 25 2019, In : Science of the Total Environment. 693, 133622.

Research output: Contribution to journalArticle

Additional changes to taxonomy ratified in a special vote by the International Committee on Taxonomy of Viruses (October 2018)

Siddell, S. G., Walker, P. J., Lefkowitz, E. J., Mushegian, A. R., Adams, M. J., Dutilh, B. E., Gorbalenya, A. E., Harrach, B., Harrison, R. L., Junglen, S., Knowles, N. J., Kropinski, A. M., Krupovic, M., Kuhn, J. H., Nibert, M., Rubino, L., Sabanadzovic, S., Sanfaçon, H., Simmonds, P., Varsani, A. & 2 others, Zerbini, F. M. & Davison, A. J., Jan 1 2019, (Accepted/In press) In : Archives of Virology.

Research output: Contribution to journalArticle

16 Scopus citations

A Deep Q-Learning Approach for Dynamic Management of Heterogeneous Processors

Gupta, U., Mandal, S. K., Mao, M., Chakrabarti, C. & Ogras, U., Jan 1 2019, (Accepted/In press) In : IEEE Computer Architecture Letters.

Research output: Contribution to journalArticle

6 Scopus citations

A dielectric-defined lateral heterojunction in a monolayer semiconductor

Utama, M. I. B., Kleemann, H., Zhao, W., Ong, C. S., da Jornada, F. H., Qiu, D. Y., Cai, H., Li, H., Kou, R., Zhao, S., Wang, S., Watanabe, K., Taniguchi, T., Tongay, S., Zettl, A., Louie, S. G. & Wang, F., Feb 1 2019, In : Nature Electronics. 2, 2, p. 60-65 6 p.

Research output: Contribution to journalArticle

10 Scopus citations

A dopamine-responsive signal transduction controls transcription of salmonella enterica serovar typhimurium virulence genes

Yang, D., Kong, Y., Sun, W., Kong, W. & Shi, Y., Mar 1 2019, In : mBio. 10, 2, e02772-18.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Aflatoxin Exposure, Child Stunting, and Dysbiosis in the Intestinal Microbiome among Children in Guatemala

Voth-Gaeddert, L. E., Torres, O., Maldonado, J., Krajmalnik-Brown, R., Rittmann, B. E. & Oerther, D. B., Aug 1 2019, In : Environmental Engineering Science. 36, 8, p. 958-968 11 p.

Research output: Contribution to journalArticle

2 Scopus citations

A General Strategy for Engineering Noncanonical Amino Acid Dependent Bacterial Growth

Koh, M., Yao, A., Gleason, P. R., Mills, J. H. & Schultz, P. G., Oct 16 2019, In : Journal of the American Chemical Society. 141, 41, p. 16213-16216 4 p.

Research output: Contribution to journalArticle

8 Scopus citations

A global map of emission clumps for future monitoring of fossil fuel CO2 emissions from space

Wang, Y., Ciais, P., Broquet, G., Bréon, F. M., Oda, T., Lespinas, F., Meijer, Y., Loescher, A., Janssens-Maenhout, G., Zheng, B., Xu, H., Tao, S., Gurney, K., Roest, G., Santaren, D. & Su, Y., May 17 2019, In : Earth System Science Data. 11, 2, p. 687-703 17 p.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

Alcohol and nicotine consumption trends in three U.S. communities determined by wastewater-based epidemiology

Chen, J., Venkatesan, A. K. & Halden, R., Mar 15 2019, In : Science of the Total Environment. 656, p. 174-183 10 p.

Research output: Contribution to journalArticle

10 Scopus citations

ALG-1 Influences Accurate mRNA Splicing Patterns in the Caenorhabditis elegans Intestine and Body Muscle Tissues by Modulating Splicing Factor Activities

Kotagama, K., Schorr, A. L., Steber, H. S. & Mangone, M., Jul 1 2019, In : Genetics. 212, 3, p. 931-951 21 p.

Research output: Contribution to journalArticle

A model for meme popularity growth in social networking systems based on biological principle and human interest dynamics

Wang, L. Z., Zhao, Z. D., Jiang, J., Guo, B. H., Wang, X., Huang, Z. G. & Lai, Y-C., Feb 1 2019, In : Chaos. 29, 2, 023136.

Research output: Contribution to journalArticle

AmpliSeq transcriptome of laser captured neurons from Alzheimer brain: Comparison of single cell versus neuron pools

Deng, W., Xing, C., David, R., Mastroeni, D., Ning, M. M., Lo, E. H. & Coleman, P. D., Jan 1 2019, In : Aging and Disease. 10, 6, p. 1146-1158 13 p.

Research output: Contribution to journalArticle

Open Access

A multiplexed, electrochemical interface for gene-circuit-based sensors

Sadat Mousavi, P., Smith, S. J., Chen, J. B., Karlikow, M., Tinafar, A., Robinson, C., Liu, W., Ma, D., Green, A. A., Kelley, S. O. & Pardee, K., Jan 1 2019, (Accepted/In press) In : Nature Chemistry.

Research output: Contribution to journalArticle

2 Scopus citations

An actin-based protrusion originating from a podosome-enriched region initiates macrophage fusion

Faust, J. J., Balabiyev, A., Heddleston, J. M., Podolnikova, N. P., Baluch, D. P., Chew, T. L. & Ugarova, T. P., Aug 1 2019, In : Molecular biology of the cell. 30, 17, p. 2254-2267 14 p.

Research output: Contribution to journalArticle

Open Access

Anaerobic biodegradation of catechol by sediment microorganisms: Interactive roles of N reduction and S cycling

Zheng, X., Zhou, C., Liu, Z., Long, M., Luo, Y. H., Chen, T., Ontiveros-Valencia, A. & Rittmann, B. E., Sep 1 2019, In : Journal of Cleaner Production. 230, p. 80-89 10 p.

Research output: Contribution to journalArticle

3 Scopus citations

An alternative framework for fluorescence correlation spectroscopy

Jazani, S., Sgouralis, I., Shafraz, O. M., Levitus, M., Sivasankar, S. & Pressé, S., Dec 1 2019, In : Nature communications. 10, 1, 3662.

Research output: Contribution to journalArticle

Open Access