Knowledge Enterprise (KE)

Research Output

2020

High Level Production of Monoclonal Antibodies Using an Optimized Plant Expression System

Diamos, A. G., Hunter, J. G. L., Pardhe, M. D., Rosenthal, S. H., Sun, H., Foster, B. C., DiPalma, M. P., Chen, Q. & Mason, H. S., Jan 17 2020, In : Frontiers in Bioengineering and Biotechnology. 7, 472.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Hyperthermia induced by transient receptor potential vanilloid-1 (TRPV1) antagonists in human clinical trials: Insights from mathematical modeling and meta-analysis

Garami, A., Shimansky, Y. P., Rumbus, Z., Vizin, R. C. L., Farkas, N., Hegyi, J., Szakacs, Z., Solymar, M., Csenkey, A., Chiche, D. A., Kapil, R., Kyle, D. J., Van Horn, W. D., Hegyi, P. & Romanovsky, A. A., Apr 2020, In : Pharmacology and Therapeutics. 208, 107474.

Research output: Contribution to journalReview article

Open Access
2 Scopus citations

Immune protection is dependent on the gut microbiome in a lethal mouse gammaherpesviral infection

Yaron, J. R., Ambadapadi, S., Zhang, L., Chavan, R. N., Tibbetts, S. A., Keinan, S., Varsani, A., Maldonado, J., Kraberger, S., Tafoya, A. M., Bullard, W. L., Kilbourne, J., Stern-Harbutte, A., Krajmalnik-Brown, R., Munk, B. H., Koppang, E. O., Lim, E. S. & Lucas, A. R., Dec 1 2020, In : Scientific reports. 10, 1, 2371.

Research output: Contribution to journalArticle

Open Access

Inference of historical population-size changes with allele-frequency data

Lynch, M., Haubold, B., Pfaffelhuber, P. & Maruki, T., Jan 1 2020, In : G3: Genes, Genomes, Genetics. 10, 1, p. 211-223 13 p.

Research output: Contribution to journalArticle

Open Access

In-Field Recovery of RF Circuits from Wearout Based Performance Degradation

Chang, D., N. Kitchen, J., Kiaei, S. & Ozev, S., Apr 1 2020, In : IEEE Transactions on Emerging Topics in Computing. 8, 2, p. 442-452 11 p., 8003495.

Research output: Contribution to journalArticle

1 Scopus citations

Isolation and characterization of a novel geminivirus from parsley

Hasanvand, V., Heydanejad, J., Massumi, H., Kleinow, T., Jeske, H. & Varsani, A., Sep 2020, In : Virus research. 286, 198056.

Research output: Contribution to journalArticle

Large H2O solubility in dense silica and its implications for the interiors of water-rich planets

Nisr, C., Chen, H., Leinenweber, K., Chizmeshya, A., Prakapenka, V. B., Prescher, C., Tkachev, S. N., Meng, Y., Liu, Z. & Shim, S. H., May 5 2020, In : Proceedings of the National Academy of Sciences of the United States of America. 117, 18, p. 9747-9754 8 p.

Research output: Contribution to journalArticle

1 Scopus citations

Lessons from within: redesigning higher education

Hale, A., Archambault, L. & Wenrick, L., Feb 26 2020, In : Development and Learning in Organizations. 34, 2, p. 37-40 4 p.

Research output: Contribution to journalArticle

Open Access

MAF leads fluorescence into the new decade

Birch, D. J. S., Levitus, M. & Mély, Y., Jan 1 2020, In : Methods and applications in fluorescence. 8, 1, 010401.

Research output: Contribution to journalEditorial

Magnetic nanoparticle recovery device (MagNERD) enables application of iron oxide nanoparticles for water treatment

Powell, C. D., Atkinson, A. J., Ma, Y., Marcos-Hernandez, M., Villagran, D., Westerhoff, P. & Wong, M. S., Jan 1 2020, In : Journal of Nanoparticle Research. 22, 2, 48.

Research output: Contribution to journalArticle

Mapping the breast cancer metastatic cascade onto ctDNA using genetic and epigenetic clonal tracking

Cresswell, G. D., Nichol, D., Spiteri, I., Tari, H., Zapata, L., Heide, T., Maley, C. C., Magnani, L., Schiavon, G., Ashworth, A., Barry, P. & Sottoriva, A., Dec 1 2020, In : Nature communications. 11, 1, 1446.

Research output: Contribution to journalArticle

Open Access

Mesenchymal stem cells as carriers for systemic delivery of oncolytic viruses

Hadryś, A., Sochanik, A., McFadden, G. & Jazowiecka-Rakus, J., May 5 2020, In : European Journal of Pharmacology. 874, 172991.

Research output: Contribution to journalReview article

Open Access

Mineralogy and density of Archean volcanic crust in the mantle transition zone

Ko, B., Prakapenka, V., Kunz, M., Prescher, C., Leinenweber, K. & Shim, S. H., Aug 2020, In : Physics of the Earth and Planetary Interiors. 305, 106490.

Research output: Contribution to journalArticle

Minimal barriers to invasion during human colorectal tumor growth

Ryser, M. D., Mallo, D., Hall, A., Hardman, T., King, L. M., Tatishchev, S., Sorribes, I. C., Maley, C. C., Marks, J. R., Hwang, E. S. & Shibata, D., Dec 1 2020, In : Nature communications. 11, 1, 1280.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Modeling wastewater temperature and attenuation of sewage-borne biomarkers globally

Hart, O. E. & Halden, R. U., Apr 1 2020, In : Water Research. 172, 115473.

Research output: Contribution to journalArticle

2 Scopus citations

Moving Beyond Technical Skills: Fostering the Development of Essential Skills Needed for a Successful Career in Engineering

Larson, J., Barnard, W., Chandler, J., O'donnell, M., Savenye, W. & Zapata, C. E., Jan 1 2020, In : Geotechnical Special Publication. 2020-February, GSP 318, p. 694-701 8 p.

Research output: Contribution to journalConference article

Municipal sewage sludge as a source of microplastics in the environment

Rolsky, C., Kelkar, V., Driver, E. & Halden, R. U., Apr 2020, In : Current Opinion in Environmental Science and Health. 14, p. 16-22 7 p.

Research output: Contribution to journalReview article

4 Scopus citations
Open Access

Niche partitioning with temperature among heterocystous cyanobacteria (Scytonema spp., Nostoc spp., and Tolypothrix spp.) from biological soil crusts

Giraldo-Silva, A., Fernandes, V. M. C., Bethany, J. & Garcia-Pichel, F., Mar 2020, In : Microorganisms. 8, 3, 396.

Research output: Contribution to journalArticle

Open Access

Nongjian Tao (1963-2020)

Hihath, J. & Lindsay, S., May 1 2020, In : Nature nanotechnology. 15, 5, 1 p.

Research output: Contribution to journalArticle

Open Access

Novel nanovirus and associated alphasatellites identified in milk vetch plants with chlorotic dwarf disease in Iran

Hassan-Sheikhi, P., Heydarnejad, J., Massumi, H., Kraberger, S. & Varsani, A., Jan 15 2020, In : Virus research. 276, 1 p.

Research output: Contribution to journalArticle

1 Scopus citations

Oncolytic Viruses and the Immune System: The Dynamic Duo

Lemos de Matos, A., Franco, L. S. & McFadden, G., Jun 12 2020, In : Molecular Therapy - Methods and Clinical Development. 17, p. 349-358 10 p.

Research output: Contribution to journalReview article

Open Access
4 Scopus citations

One-Step Digital Immunoassay for Rapid and Sensitive Detection of Cardiac Troponin i

Wang, Y., Yang, Y., Chen, C., Wang, S., Wang, H., Jing, W. & Tao, N., Apr 24 2020, In : ACS sensors. 5, 4, p. 1126-1131 6 p.

Research output: Contribution to journalArticle

1 Scopus citations
1 Scopus citations

PIRT the TRP channel regulating protein binds calmodulin and cholesterol-like ligands

Sisco, N. J., Luu, D. D., Kim, M. & Van Horn, W. D., Mar 2020, In : Biomolecules. 10, 3, 478.

Research output: Contribution to journalArticle

Open Access

Precise and Programmable Detection of Mutations Using Ultraspecific Riboregulators

Hong, F., Ma, D., Wu, K., Mina, L. A., Luiten, R. C., Liu, Y., Yan, H. & Green, A. A., Mar 5 2020, In : Cell. 180, 5, p. 1018-1032.e16

Research output: Contribution to journalArticle

Open Access
4 Scopus citations

Programming nanoparticle valence bonds with single-stranded DNA encoders

Yao, G., Li, J., Li, Q., Chen, X., Liu, X., Wang, F., Qu, Z., Ge, Z., Narayanan, R. P., Williams, D., Pei, H., Zuo, X., Wang, L., Yan, H., Feringa, B. L. & Fan, C., Jul 1 2020, In : Nature materials. 19, 7, p. 781-788 8 p.

Research output: Contribution to journalArticle

2 Scopus citations

Rapid Antibiotic Susceptibility Testing Based on Bacterial Motion Patterns with Long Short- Term Memory Neural Networks

Iriya, R., Jing, W., Syal, K., Mo, M., Chen, C., Yu, H., Haydel, S. E., Wang, S. & Tao, N., May 1 2020, In : IEEE Sensors Journal. 20, 9, p. 4940-4950 11 p., 8962015.

Research output: Contribution to journalArticle

1 Scopus citations

Reliable Breathing Tracking with Wearable Mask Device

Tipparaju, V. V., Xian, X., Bridgeman, D., Wang, D., Tsow, F., Forzani, E. & Tao, N., May 15 2020, In : IEEE Sensors Journal. 20, 10, p. 5510-5518 9 p., 8970244.

Research output: Contribution to journalArticle

Representation, Exploration and Recommendation of Playlists

Papreja, P., Venkateswara, H. & Panchanathan, S., Jan 1 2020, Machine Learning and Knowledge Discovery in Databases - International Workshops of ECML PKDD 2019, Proceedings. Cellier, P. & Driessens, K. (eds.). Springer, p. 543-550 8 p. (Communications in Computer and Information Science; vol. 1168 CCIS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Reproductive state and water deprivation increase plasma corticosterone in a capital breeder

Brusch, G. A., DeNardo, D. F. & Lourdais, O., Mar 1 2020, In : General and Comparative Endocrinology. 288, 113375.

Research output: Contribution to journalArticle

Roles of entropic and solvent damping forces in the dynamics of polymer tethered nanoparticles and implications for single molecule sensing

Ma, G., Wan, Z., Zhu, H. & Tao, N., Jan 1 2020, In : Chemical Science. 11, 5, p. 1283-1289 7 p.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Sexual dimorphism in atrophic effects of topical glucocorticoids is driven by differential regulation of atrophogene REDD1 in male and female skin

Baida, G., Agarwal, S., Readhead, B., Dudley, J. T. & Budunova, I., Jan 28 2020, In : Oncotarget. 11, 4, p. 409-418 10 p.

Research output: Contribution to journalArticle

Sorghum mastrevirus-associated alphasatellites: new geminialphasatellites associated with an African streak mastrevirus infecting wild Poaceae plants on Reunion Island

Claverie, S., Varsani, A., Hoareau, M., Filloux, D., Roumagnac, P., Martin, D. P., Lefeuvre, P. & Lett, J. M., Aug 1 2020, In : Archives of virology. 165, 8, p. 1925-1928 4 p.

Research output: Contribution to journalArticle

Structure-Based Design of Novel Biphenyl Amide Antagonists of Human Transient Receptor Potential Cation Channel Subfamily M Member 8 Channels with Potential Implications in the Treatment of Sensory Neuropathies

Journigan, V. B., Feng, Z., Rahman, S., Wang, Y., Amin, A. R. M. R., Heffner, C. E., Bachtel, N., Wang, S., Gonzalez-Rodriguez, S., Fernández-Carvajal, A., Fernández-Ballester, G., Hilton, J. K., Van Horn, W. D., Ferrer-Montiel, A., Xie, X. Q. & Rahman, T., Feb 5 2020, In : ACS chemical neuroscience. 11, 3, p. 268-290 23 p.

Research output: Contribution to journalArticle

Suppression of water-bloom cyanobacterium Microcystis aeruginosa by algaecide hydrogen peroxide maximized through programmed cell death

Zhou, T., Cao, H., Zheng, J., Teng, F., Wang, X., Lou, K., Zhang, X. & Tao, Y., Jul 5 2020, In : Journal of Hazardous Materials. 393, 122394.

Research output: Contribution to journalArticle

SV40 large T antigen is not responsible for the loss of STING in 293T cells but can inhibit cGAS-STING interferon induction

Reus, J. B., Trivino-Soto, G. S., Wu, L. I., Kokott, K. & Lim, E. S., Jan 1 2020, In : Viruses. 12, 2, v12020137.

Research output: Contribution to journalArticle

Open Access

Symptom evolution following the emergence of maize streak virus

Monjane, A. L., Dellicour, S., Hartnady, P., Oyeniran, K. A., Owor, B. E., Bezeidenhout, M., Linderme, D., Syed, R. A., Donaldson, L., Murray, S., Rybicki, E. P., Kvarnheden, A., Yazdkhasti, E., Lefeuvre, P., Froissart, R., Roumagnac, P., Shepherd, D. N., Harkins, G. W., Suchard, M. A., Lemey, P. & 2 others, Varsani, A. & Martin, D. P., Jan 2020, In : eLife. 9, e51984.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Synergistic Combination of Oncolytic Virotherapy and Immunotherapy for Glioma

Tang, B., Guo, Z. S., Bartlett, D. L., Yan, D. Z., Schane, C. P., Thomas, D. L., Liu, J., McFadden, G., Shisler, J. L., Roy, E. J. & Roy, E. J., May 1 2020, In : Clinical Cancer Research. 26, 9, p. 2216-2230 15 p.

Research output: Contribution to journalArticle

2 Scopus citations

Synthesized Geopolymers Adsorb Bacterial Proteins, Toxins, and Cells

Popovich, J., Chen, S., Iannuzo, N., Ganser, C., Seo, D. K. & Haydel, S. E., Jun 3 2020, In : Frontiers in Bioengineering and Biotechnology. 8, 527.

Research output: Contribution to journalArticle

Open Access

Temporospatial shifts in the human gut microbiome and metabolome after gastric bypass surgery

Ilhan, Z. E., DiBaise, J. K., Dautel, S. E., Isern, N. G., Kim, Y. M., Hoyt, D. W., Schepmoes, A. A., Brewer, H. M., Weitz, K. K., Metz, T. O., Crowell, M. D., Kang, D. W., Rittmann, B. E. & Krajmalnik-Brown, R., Dec 1 2020, In : npj Biofilms and Microbiomes. 6, 1, 12.

Research output: Contribution to journalArticle

Open Access

The bridgmanite–akimotoite–majorite triple point determined in large volume press and laser-heated diamond anvil cell

Kulka, B. L., Dolinschi, J. D., Leinenweber, K. D., Prakapenka, V. B. & Shim, S. H., Jan 2020, In : Minerals. 10, 1, 67.

Research output: Contribution to journalArticle

Open Access

The Limits to Estimating Population-Genetic Parameters with Temporal Data

Lynch, M. & Ho, W. C., Apr 1 2020, In : Genome biology and evolution. 12, 4, p. 443-455 13 p.

Research output: Contribution to journalArticle

Open Access

The new scope of virus taxonomy: partitioning the virosphere into 15 hierarchical ranks

International Committee on Taxonomy of Viruses Executive Committee, May 1 2020, In : Nature Microbiology. 5, 5, p. 668-674 7 p.

Research output: Contribution to journalReview article

Open Access
1 Scopus citations

The role of endophytic/epiphytic bacterial constituents in the immunostimulatory activity of the botanical, astragalus membranaceus

Koehler, H., Puchalski, K., Ruiz, G., Jacobs, B. & Langland, J., Jun 2020, In : Yale Journal of Biology and Medicine. 93, 2, p. 239-250 12 p.

Research output: Contribution to journalArticle

The role of tumor-stroma interactions on desmoplasia and tumorigenicity within a microengineered 3D platform

Saini, H., Rahmani Eliato, K., Veldhuizen, J., Zare, A., Allam, M., Silva, C., Kratz, A., Truong, D., Mouneimne, G., LaBaer, J., Ros, R. & Nikkhah, M., Jul 2020, In : Biomaterials. 247, 119975.

Research output: Contribution to journalArticle

1 Scopus citations

The trait repertoire enabling cyanobacteria to bloom assessed through comparative genomic complexity and metatranscriptomics

Cao, H., Shimura, Y., Steffen, M. M., Yang, Z., Lu, J., Joel, A., Jenkins, L., Kawachi, M., Yin, Y. & Garcia-Pichel, F., 2020, In : mBio. 11, 3, p. 1-14 14 p., e01155-20.

Research output: Contribution to journalArticle

Open Access