IAFSE-BHSE: Bioengineering, Harrington Department of

Research Output 1970 2019

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Article
2015
7 Citations (Scopus)
Pluripotent Stem Cells
Stem Cells
Embryoid Bodies
Nestin
Microtubule-Associated Proteins
14 Citations (Scopus)

Generation of an expandable intermediate mesoderm restricted progenitor cell line from human pluripotent stem cells

Kumar, N., Richter, J., Cutts, J., Bush, K. T., Trujillo, C., Nigam, S. K., Gaasterland, T., Brafman, D. & Willert, K., Nov 10 2015, In : eLife. 4, NOVEMBER2015, e08413.

Research output: Contribution to journalArticle

Pluripotent Stem Cells
Mesoderm
Stem cells
Stem Cells
Cells
3 Citations (Scopus)

Getting a grasp of theories of sensorimotor control of the hand: Identification of underlying neural mechanisms

Santello, M., Apr 1 2015, In : Motor Control. 19, 2, p. 149-153 5 p.

Research output: Contribution to journalArticle

Hand Strength
Hand
Robotics
Learning
81 Citations (Scopus)

Gold nanorod-incorporated gelatin-based conductive hydrogels for engineering cardiac tissue constructs

Navaei, A., Saini, H., Christenson, W., Sullivan, R. T., Ros, R. & Nikkhah, M., Dec 15 2015, (Accepted/In press) In : Acta Biomaterialia.

Research output: Contribution to journalArticle

Nanotubes
Hydrogels
Gelatin
Tissue Engineering
Nanorods
4 Citations (Scopus)

Hemodynamic characterization of geometric cerebral aneurysm templates

Nair, P., Chong, B. W., Indahlastari, A., Lindsay, J., DeJeu, D., Parthasarathy, V., Ryan, J., Babiker, H., Workman, C., Gonzalez, L. F. & Frakes, D., 2015, (Accepted/In press) In : Journal of Biomechanics.

Research output: Contribution to journalArticle

Hemodynamics
Intracranial Aneurysm
Domes
Neck
Anatomic Models
1 Citation (Scopus)
Mirror Neurons
approach control
Hand Strength
neurons
inference
1 Citation (Scopus)

Informative features of local field potential signals in primary visual cortex during natural image stimulation

Seyedhosseini, M., Shushruth, S., Davis, T., Ichida, J. M., House, P. A., Greger, B., Angelucci, A. & Tasdizen, T., 2015, In : Journal of Neurophysiology. 113, 5, p. 1520-1532 13 p.

Research output: Contribution to journalArticle

Macaca
Visual Cortex
Neurophysiology
Visual Fields
Uncertainty
13 Citations (Scopus)

Integrin α3β1 binding to fibronectin is dependent on the ninth type III repeat

Brown, A. C., Dysart, M. M., Clarke, K. C., Stabenfeldt, S. & Barker, T. H., Oct 16 2015, In : Journal of Biological Chemistry. 290, 42, p. 25534-25547 14 p.

Research output: Contribution to journalArticle

Fibronectins
Integrins
Epithelial Cells
Mutation
Surface Plasmon Resonance

Introductory editorial: Stem cell biology

Brafman, D., Campbell, S., Lam, A. Q., Kim, J. J., Nikkhah, M. & Stabenfeldt, S., 2015, In : Biomarker Insights. 10, p. 133-137 5 p., 013.

Research output: Contribution to journalArticle

Cytology
Stem cells
5 Citations (Scopus)

Length and time for development of laminar flow in tubes following a step increase of volume flux

Chaudhury, R. A., Herrmann, M., Frakes, D. & Adrian, R., Nov 22 2015, In : Experiments in Fluids. 56, 1

Research output: Contribution to journalArticle

laminar flow
Laminar flow
Steady flow
Fluxes
tubes
44 Citations (Scopus)

Multi-parametric MRI and texture analysis to visualize spatial histologic heterogeneity and tumor extent in glioblastoma

Hu, L. S., Ning, S., Eschbacher, J. M., Gaw, N., Dueck, A. C., Smith, K. A., Nakaji, P., Plasencia, J., Ranjbar, S., Price, S. J., Tran, N., Loftus, J., Jenkins, R., O'Neill, B. P., Elmquist, W., Baxter, L. C., Gao, F., Frakes, D., Karis, J. P., Zwart, C. & 5 others, Swanson, K. R., Sarkaria, J., Wu, T., Mitchell, J. R. & Li, J., Nov 1 2015, In : PLoS One. 10, 11, e0141506.

Research output: Contribution to journalArticle

Glioblastoma
Magnetic resonance imaging
Tumors
Textures
texture
27 Citations (Scopus)

Multi-scale analysis of neural activity in humans: Implications for micro-scale electrocorticography

Kellis, S., Sorensen, L., Darvas, F., Sayres, C., O'Neill, K., Brown, R. B., House, P., Ojemann, J. & Greger, B., 2015, (Accepted/In press) In : Clinical Neurophysiology.

Research output: Contribution to journalArticle

Human Activities
Electrodes
Microelectrodes
Neural Prostheses
Pathology
13 Citations (Scopus)

Project-Based Learning

Gary, K., Sep 1 2015, In : Computer. 48, 9, p. 98-100 3 p., 7274311.

Research output: Contribution to journalArticle

Curricula
Trajectories
Students
Engineers
12 Citations (Scopus)

Retention and interference of learned dexterous manipulation: Interaction between multiple sensorimotor processes

Fu, Q. & Santello, M., Jan 1 2015, In : Journal of Neurophysiology. 113, 1, p. 144-155 12 p.

Research output: Contribution to journalArticle

Torque
Learning
Central Nervous System
Hand
Retention (Psychology)
8 Citations (Scopus)

Sensitive detection of cardiac biomarkers using a magnetic microbead immunoassay

Woolley, C. F. & Hayes, M., Oct 21 2015, In : Analytical Methods. 7, 20, p. 8632-8639 8 p.

Research output: Contribution to journalArticle

Myoglobin
Biomarkers
Fatty acids
Fatty Acid-Binding Proteins
Microscopes
6 Citations (Scopus)

Sensorimotor control of gait: A novel approach for the study of the interplay of visual and proprioceptive feedback

Frost, R., Skidmore, J., Santello, M. & Artemiadis, P., Feb 9 2015, In : Frontiers in Human Neuroscience. 9, FEB, 14.

Research output: Contribution to journalArticle

Sensory Feedback
Gait
Biomechanical Phenomena
Leg
Touch

Spatiotemporal video deinterlacing using control grid interpolation

Venkatesan, R., Zwart, C. M., Frakes, D. & Li, B., Mar 1 2015, In : Journal of Electronic Imaging. 24, 2, 023022.

Research output: Contribution to journalArticle

interpolation
Interpolation
Display devices
grids
Weight control
30 Citations (Scopus)

Taking roles in interdisciplinary collaborations: Reflections on working in post-ELSI spaces in the UK synthetic biology community

Balmer, A. S., Calvert, J., Marris, C., Molyneux-Hodgson, S., Frow, E., Kearnes, M., Bulpin, K., Schyfter, P., MacKenzie, A. & Martin, P., 2015, In : Science and Technology Studies. 28, 3, p. 3-25 23 p.

Research output: Contribution to journalArticle

Social Space
Synthetic Biology
Interdisciplinary Collaboration
Criticism
Social Practice
32 Citations (Scopus)

Targeted Large-Scale Deletion of Bacterial Genomes Using CRISPR-Nickases

Standage-Beier, K., Zhang, Q. & Wang, X., Nov 20 2015, In : ACS Synthetic Biology. 4, 11, p. 1217-1225 9 p.

Research output: Contribution to journalArticle

Clustered Regularly Interspaced Short Palindromic Repeats
Bacterial Genomes
Genes
Deoxyribonuclease I
Genome
8 Citations (Scopus)

The histone deacetylase inhibitor Entinostat enhances polymer-mediated transgene expression in cancer cell lines

Elmer, J. J., Christensen, M. D., Barua, S., Lehrman, J., Haynes, K. & Rege, K., 2015, (Accepted/In press) In : Biotechnology and Bioengineering.

Research output: Contribution to journalArticle

Histone Deacetylase Inhibitors
Transgenes
Histones
Polymers
Cells
10 Citations (Scopus)

Tunable controlled release of bioactive SDF-1α via specific protein interactions within fibrin/nanoparticle composites

Dutta, D., Fauer, C., Mulleneux, H. L. & Stabenfeldt, S., 2015, In : Journal of Materials Chemistry B. 3, 40, p. 7963-7973 11 p.

Research output: Contribution to journalArticle

Chemokine CXCL12
Fibrin
Nanoparticles
Proteins
Composite materials
33 Citations (Scopus)

Ventriculostomy Simulation Using Patient-Specific Ventricular Anatomy, 3D Printing, and Hydrogel Casting

Ryan, J. R., Chen, T., Nakaji, P., Frakes, D. & Gonzalez, L. F., Nov 1 2015, In : World Neurosurgery. 84, 5, p. 1333-1339 7 p.

Research output: Contribution to journalArticle

Patient Simulation
Ventriculostomy
Hydrogel
Anatomy
Gravitation
2016
2 Citations (Scopus)

Advanced Manufactured Fused Filament Fabrication 3D Printed Osseointegrated Prosthesis for a Transhumeral Amputation Using Taulman 680 FDA

Lathers, S. & LaBelle, J., Sep 1 2016, In : 3D Printing and Additive Manufacturing. 3, 3, p. 166-174 9 p.

Research output: Contribution to journalArticle

Prosthetics
Bone
Fabrication
Elastic moduli
Nylons
43 Citations (Scopus)

A geometrical approach to control and controllability of nonlinear dynamical networks

Wang, L. Z., Su, R. Q., Huang, Z. G., Wang, X., Wang, W. X., Grebogi, C. & Lai, Y-C., Apr 14 2016, In : Nature Communications. 7, 11323.

Research output: Contribution to journalArticle

Nonlinear Dynamics
Gene Regulatory Networks
controllability
Controllability
Noise
14 Citations (Scopus)

A High Performance Pulsatile Pump for Aortic Flow Experiments in 3-Dimensional Models

Chaudhury, R. A., Atlasman, V., Pathangey, G., Pracht, N., Adrian, R. & Frakes, D., Jun 1 2016, In : Cardiovascular Engineering and Technology. 7, 2, p. 148-158 11 p.

Research output: Contribution to journalArticle

Pulsatile Flow
Pulsatile flow
Pumps
Pathology
Pistons

Analytic Modeling of Neural Tissue: I. A Spherical Bidomain

Schwartz, B. L., Chauhan, M. & Sadleir, R., Dec 1 2016, In : Journal of Mathematical Neuroscience. 6, 1, 9.

Research output: Contribution to journalArticle

Membranes
Magnetic Fields
Injections
4 Citations (Scopus)

Approaches to a cortical vision prosthesis: Implications of electrode size and placement

Christie, B. P., Ashmont, K. R., House, P. A. & Greger, B., Feb 23 2016, In : Journal of Neural Engineering. 13, 2, 025003.

Research output: Contribution to journalArticle

Microelectrodes
Prostheses and Implants
Electrodes
Restoration
Visual Cortex
2 Citations (Scopus)

A role for dynamic contrast-enhanced magnetic resonance imaging in predicting tumour radiation response

Hallac, R. R., Zhou, H., Pidikiti, R., Song, K., Solberg, T., Kodibagkar, V., Peschke, P. & Mason, R. P., May 24 2016, In : British Journal of Cancer. 114, 11, p. 1206-1211 6 p.

Research output: Contribution to journalArticle

Magnetic Resonance Imaging
Radiation
Neoplasms
Respiration
Air
6 Citations (Scopus)

Asking new questions with old data: The centralized open-access rehabilitation database for stroke

Lohse, K. R., Schaefer, S., Raikes, A. C., Boyd, L. A. & Lang, C. E., Sep 20 2016, In : Frontiers in Neurology. 7, SEP, 153.

Research output: Contribution to journalArticle

Databases
Research Personnel
Randomized Controlled Trials
Stroke
Clinical Trials
2 Citations (Scopus)

A specific structuring element-based opening method for rapid geometry measurement of weld pool

Liu, J., Hu, Y., Wu, B., Frakes, D. & Wang, Y., Sep 27 2016, (Accepted/In press) In : International Journal of Advanced Manufacturing Technology. p. 1-13 13 p.

Research output: Contribution to journalArticle

Welds
Geometry
Binary images
Laser beam welding
Computer vision
11 Citations (Scopus)

Assessment of myoelectric controller performance and kinematic behavior of a novel soft synergy-inspired robotic hand for prosthetic applications

Fani, S., Bianchi, M., Jain, S., Neto, J. S. P., Boege, S., Grioli, G., Bicchi, A. & Santello, M., Oct 1 2016, In : Frontiers in Neurorobotics. 10, 11.

Research output: Contribution to journalArticle

End effectors
Prosthetics
Electromyography
Kinematics
Controllers
36 Citations (Scopus)

A synergy-based hand control is encoded in human motor cortical areas

Leo, A., Handjaras, G., Bianchi, M., Marino, H., Gabiccini, M., Guidi, A., Scilingo, E. P., Pietrini, P., Bicchi, A., Santello, M. & Ricciardi, E., Feb 15 2016, In : eLife. 5, FEBRUARY2016, e13420.

Research output: Contribution to journalArticle

Motor Cortex
Hand
Muscle
Brain
Kinematics
39 Citations (Scopus)

A three dimensional micropatterned tumor model for breast cancer cell migration studies

Peela, N., Sam, F. S., Christenson, W., Truong, D., Watson, A. W., Mouneimne, G., Ros, R. & Nikkhah, M., Mar 1 2016, In : Biomaterials. 81, p. 72-83 12 p.

Research output: Contribution to journalArticle

Cell Movement
Tumors
Cells
Breast Neoplasms
Neoplasms
1 Citation (Scopus)

Autonomous control for mechanically stable navigation of microscale implants in brain tissue to record neural activity

Anand, S., Kumar, S. S. & Muthuswamy, J., Aug 1 2016, In : Biomedical Microdevices. 18, 4, 72.

Research output: Contribution to journalArticle

Microelectrodes
Brain
Navigation
Tissue
Signal-To-Noise Ratio
8 Citations (Scopus)

Bio-inspired controller on an fpga applied to closed-loop diaphragmatic stimulation

Zbrzeski, A., Bornat, Y., Hillen, B., Siu, R., Abbas, J., Jung, R. & Renaud, S., Jun 16 2016, In : Frontiers in Neuroscience. 10, JUN, 275.

Research output: Contribution to journalArticle

Ventilation
Respiration
Self-Help Devices
Costs and Cost Analysis
Respiratory Muscles
46 Citations (Scopus)

Breast cancer cell invasion into a three dimensional tumor-stroma microenvironment

Truong, D., Puleo, J., Llave, A., Mouneimne, G., Kamm, R. D. & Nikkhah, M., Sep 28 2016, In : Scientific Reports. 6, 34094.

Research output: Contribution to journalArticle

Tumor Microenvironment
Breast Neoplasms
Neoplasms
Microfluidics
Hydrogel
36 Citations (Scopus)

Cerebral Aneurysm Clipping Surgery Simulation Using Patient-Specific 3D Printing and Silicone Casting

Ryan, J. R., Almefty, K. K., Nakaji, P. & Frakes, D., Apr 1 2016, In : World Neurosurgery. 88, p. 175-181 7 p.

Research output: Contribution to journalArticle

Patient Simulation
Intracranial Aneurysm
Silicones
Aneurysm
Learning
9 Citations (Scopus)

Changing head model extent affects finite element predictions of transcranial direct current stimulation distributions

Indahlastari, A., Chauhan, M., Schwartz, B. & Sadleir, R., Oct 5 2016, In : Journal of Neural Engineering. 13, 6, 066006.

Research output: Contribution to journalArticle

Head
Current density
Bioelectric phenomena
Skull Base
Skull
20 Citations (Scopus)

Characteristics and adaptive strategies linked with falls in stroke survivors from analysis of laboratory-induced falls

Honeycutt, C., Nevisipour, M. & Grabiner, M. D., Oct 3 2016, In : Journal of Biomechanics. 49, 14, p. 3313-3319 7 p.

Research output: Contribution to journalArticle

Survivors
Kinematics
Stroke
Recovery
Exercise equipment
23 Citations (Scopus)

Concentration of Sindbis virus with optimized gradient insulator-based dielectrophoresis

Ding, J., Lawrence, R. M., Jones, P. V., Hogue, B. & Hayes, M., Mar 21 2016, In : Analyst. 141, 6, p. 1997-2008 12 p.

Research output: Contribution to journalArticle

Sindbis Virus
Microfluidics
Lab-On-A-Chip Devices
Electrophoresis
Viruses
10 Citations (Scopus)

Data-based reconstruction of complex geospatial networks, nodal positioning and detection of hidden nodes

Su, R. Q., Wang, W. X., Wang, X. & Lai, Y-C., Jan 1 2016, In : Royal Society Open Science. 3, 1, 150577.

Research output: Contribution to journalArticle

Complex networks
Time series
Time delay
Topology

Design and Verification of Novel Low-Cost MR-Guided Small-Animal Stereotactic System

Plasencia, J. D., Hu, L. S., Turner, G. H., Bennett, K. M. & Frakes, D., Aug 1 2016, In : Journal of Medical and Biological Engineering. 36, 4, p. 526-535 10 p.

Research output: Contribution to journalArticle

Needles
Animals
Software
Biopsy
Magnetic resonance
3 Citations (Scopus)

Digit position and forces covary during anticipatory control of whole-hand manipulation

Marneweck, M., Lee-Miller, T., Santello, M. & Gordon, A. M., Sep 15 2016, In : Frontiers in Human Neuroscience. 10, SEP2016, 461.

Research output: Contribution to journalArticle

Thumb
Hand Strength
Fingers
Hand
Articular Range of Motion
2 Citations (Scopus)

Discriminability of single and multichannel intracortical microstimulation within somatosensory cortex

Overstreet, C. K., Hellman, R. B., Wong, R. D. P., Santos, V. J. & Helms Tillery, S., Jan 1 2016, In : Frontiers in Bioengineering and Biotechnology. 4, DEC, 91.

Research output: Contribution to journalArticle

Somatosensory Cortex
Electrodes
Sensory Feedback
Touch
Extremities
5 Citations (Scopus)

Enhanced Motor Recovery after Stroke with Combined Cortical Stimulation and Rehabilitative Training Is Dependent on Infarct Location

Boychuk, J. A., Schwerin, S. C., Thomas, N., Roger, A., Silvera, G., Liverpool, M., Adkins, D. L. & Kleim, J., Feb 1 2016, In : Neurorehabilitation and Neural Repair. 30, 2, p. 173-181 9 p.

Research output: Contribution to journalArticle

Stroke
Middle Cerebral Artery Infarction
Infarction
Internal Capsule
Middle Cerebral Artery

Erratum: Biophysical separation of Staphylococcus epidermidis strains based on antibiotic resistance (Analyst (2015) 140 (5152-5161) )

Jones, P. V., Huey Hilton, S., Davis, P. E., Yanashima, R., McLemore, R., McLaren, A. & Hayes, M., Jan 7 2016, In : Analyst. 141, 1, p. 352 1 p.

Research output: Contribution to journalArticle

Anti-Bacterial Agents
10 Citations (Scopus)

Finite element modeling of human brain response to football helmet impacts

Darling, T., Muthuswamy, J. & Rajan, S., Feb 11 2016, (Accepted/In press) In : Computer Methods in Biomechanics and Biomedical Engineering. p. 1-11 11 p.

Research output: Contribution to journalArticle

Brain
Strain rate
Cell death
Loads (forces)
22 Citations (Scopus)

Five rules of thumb for post-ELSI interdisciplinary collaborations

Balmer, A. S., Calvert, J., Marris, C., Molyneux-Hodgson, S., Frow, E., Kearnes, M., Bulpin, K., Schyfter, P., Mackenzie, A. & Martin, P., Jan 2 2016, In : Journal of Responsible Innovation. 3, 1, p. 73-80 8 p.

Research output: Contribution to journalArticle

Natural sciences
Social sciences
Rules of thumb
3 Citations (Scopus)

Grasp performance of a soft synergy-based prosthetic hand: A pilot study

Gailey, A. S., Godfrey, S. B., Breighner, R. E., Andrews, K. L., Zhao, K. D., Bicchi, A. & Santello, M., Jan 1 2016, In : IEEE Transactions on Neural Systems and Rehabilitation Engineering. 25, 12, p. 2407-2417 11 p.

Research output: Contribution to journalArticle

Hand Strength
Prosthetics
Hand
End effectors
Muscle
79 Citations (Scopus)

Hand synergies: Integration of robotics and neuroscience for understanding the control of biological and artificial hands

Santello, M., Bianchi, M., Gabiccini, M., Ricciardi, E., Salvietti, G., Prattichizzo, D., Ernst, M., Moscatelli, A., Jörntell, H., Kappers, A. M. L., Kyriakopoulos, K., Albu-Schäffer, A., Castellini, C. & Bicchi, A., Feb 2 2016, (Accepted/In press) In : Physics of Life Reviews.

Research output: Contribution to journalArticle

neurology
neurophysiology
Robotics
End effectors
Neurosciences