IAFSE-BHSE: Bioengineering, Harrington Department of

Research Output 1970 2019

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2015
13 Citations (Scopus)

Integrin α3β1 binding to fibronectin is dependent on the ninth type III repeat

Brown, A. C., Dysart, M. M., Clarke, K. C., Stabenfeldt, S. & Barker, T. H., Oct 16 2015, In : Journal of Biological Chemistry. 290, 42, p. 25534-25547 14 p.

Research output: Contribution to journalArticle

Fibronectins
Integrins
Epithelial Cells
Mutation
Surface Plasmon Resonance

Introductory editorial: Stem cell biology

Brafman, D., Campbell, S., Lam, A. Q., Kim, J. J., Nikkhah, M. & Stabenfeldt, S., 2015, In : Biomarker Insights. 10, p. 133-137 5 p., 013.

Research output: Contribution to journalArticle

Cytology
Stem cells
5 Citations (Scopus)

Length and time for development of laminar flow in tubes following a step increase of volume flux

Chaudhury, R. A., Herrmann, M., Frakes, D. & Adrian, R., Nov 22 2015, In : Experiments in Fluids. 56, 1

Research output: Contribution to journalArticle

laminar flow
Laminar flow
Steady flow
Fluxes
tubes
43 Citations (Scopus)

Multi-parametric MRI and texture analysis to visualize spatial histologic heterogeneity and tumor extent in glioblastoma

Hu, L. S., Ning, S., Eschbacher, J. M., Gaw, N., Dueck, A. C., Smith, K. A., Nakaji, P., Plasencia, J., Ranjbar, S., Price, S. J., Tran, N., Loftus, J., Jenkins, R., O'Neill, B. P., Elmquist, W., Baxter, L. C., Gao, F., Frakes, D., Karis, J. P., Zwart, C. & 5 others, Swanson, K. R., Sarkaria, J., Wu, T., Mitchell, J. R. & Li, J., Nov 1 2015, In : PLoS One. 10, 11, e0141506.

Research output: Contribution to journalArticle

Glioblastoma
Magnetic resonance imaging
Tumors
Textures
texture
27 Citations (Scopus)

Multi-scale analysis of neural activity in humans: Implications for micro-scale electrocorticography

Kellis, S., Sorensen, L., Darvas, F., Sayres, C., O'Neill, K., Brown, R. B., House, P., Ojemann, J. & Greger, B., 2015, (Accepted/In press) In : Clinical Neurophysiology.

Research output: Contribution to journalArticle

Human Activities
Electrodes
Microelectrodes
Neural Prostheses
Pathology
12 Citations (Scopus)

Project-Based Learning

Gary, K., Sep 1 2015, In : Computer. 48, 9, p. 98-100 3 p., 7274311.

Research output: Contribution to journalArticle

Curricula
Trajectories
Students
Engineers
11 Citations (Scopus)

Retention and interference of learned dexterous manipulation: Interaction between multiple sensorimotor processes

Fu, Q. & Santello, M., Jan 1 2015, In : Journal of Neurophysiology. 113, 1, p. 144-155 12 p.

Research output: Contribution to journalArticle

Torque
Learning
Central Nervous System
Hand
Retention (Psychology)
8 Citations (Scopus)

Sensitive detection of cardiac biomarkers using a magnetic microbead immunoassay

Woolley, C. F. & Hayes, M., Oct 21 2015, In : Analytical Methods. 7, 20, p. 8632-8639 8 p.

Research output: Contribution to journalArticle

Myoglobin
Biomarkers
Fatty acids
Fatty Acid-Binding Proteins
Microscopes
6 Citations (Scopus)
Sensory Feedback
Gait
Biomechanical Phenomena
Leg
Touch

Spatiotemporal video deinterlacing using control grid interpolation

Venkatesan, R., Zwart, C. M., Frakes, D. & Li, B., Mar 1 2015, In : Journal of Electronic Imaging. 24, 2, 023022.

Research output: Contribution to journalArticle

interpolation
Interpolation
Display devices
grids
Weight control
29 Citations (Scopus)

Taking roles in interdisciplinary collaborations: Reflections on working in post-ELSI spaces in the UK synthetic biology community

Balmer, A. S., Calvert, J., Marris, C., Molyneux-Hodgson, S., Frow, E., Kearnes, M., Bulpin, K., Schyfter, P., MacKenzie, A. & Martin, P., 2015, In : Science and Technology Studies. 28, 3, p. 3-25 23 p.

Research output: Contribution to journalArticle

Social Space
Synthetic Biology
Interdisciplinary Collaboration
Criticism
Social Practice
32 Citations (Scopus)

Targeted Large-Scale Deletion of Bacterial Genomes Using CRISPR-Nickases

Standage-Beier, K., Zhang, Q. & Wang, X., Nov 20 2015, In : ACS Synthetic Biology. 4, 11, p. 1217-1225 9 p.

Research output: Contribution to journalArticle

Clustered Regularly Interspaced Short Palindromic Repeats
Bacterial Genomes
Genes
Deoxyribonuclease I
Genome
8 Citations (Scopus)

The histone deacetylase inhibitor Entinostat enhances polymer-mediated transgene expression in cancer cell lines

Elmer, J. J., Christensen, M. D., Barua, S., Lehrman, J., Haynes, K. & Rege, K., 2015, (Accepted/In press) In : Biotechnology and Bioengineering.

Research output: Contribution to journalArticle

Histone Deacetylase Inhibitors
Transgenes
Histones
Polymers
Cells
10 Citations (Scopus)

Tunable controlled release of bioactive SDF-1α via specific protein interactions within fibrin/nanoparticle composites

Dutta, D., Fauer, C., Mulleneux, H. L. & Stabenfeldt, S., 2015, In : Journal of Materials Chemistry B. 3, 40, p. 7963-7973 11 p.

Research output: Contribution to journalArticle

Chemokine CXCL12
Fibrin
Nanoparticles
Proteins
Composite materials
32 Citations (Scopus)

Ventriculostomy Simulation Using Patient-Specific Ventricular Anatomy, 3D Printing, and Hydrogel Casting

Ryan, J. R., Chen, T., Nakaji, P., Frakes, D. & Gonzalez, L. F., Nov 1 2015, In : World Neurosurgery. 84, 5, p. 1333-1339 7 p.

Research output: Contribution to journalArticle

Patient Simulation
Ventriculostomy
Hydrogel
Anatomy
Gravitation
2014
48 Citations (Scopus)

Acute human brain responses to intracortical microelectrode arrays: Challenges and future prospects

Fernández, E., Greger, B., House, P. A., Aranda, I., Botella, C., Albisua, J., Soto-Sánchez, C., Alfaro, A. & Normann, R. A., Jul 21 2014, In : Frontiers in Neuroengineering. 7, JUL, 24.

Research output: Contribution to journalArticle

Microelectrodes
Brain
Neurons
Neurology
Nervous System
7 Citations (Scopus)

A disposable tear glucose biosensor - Part 4: Preliminary animal model study assessing efficacy, safety, and feasibility

LaBelle, J., Engelschall, E., Lan, K., Shah, P., Saez, N., Maxwell, S., Adamson, T., Abou-Eid, M., McAferty, K., Patel, D. R. & Cook, C. B., 2014, In : Journal of diabetes science and technology. 8, 1, p. 109-116 8 p.

Research output: Contribution to journalArticle

Biosensing Techniques
Tears
Biosensors
Glucose
Blood Glucose
2 Citations (Scopus)

A functional model and simulation of spinal motor pools and intrafascicular recordings of motoneuron activity in peripheral nerve

Abdelghani, M. N., Abbas, J., Horch, K. W. & Jung, R., 2014, In : Frontiers in Neuroscience. 8, OCT, 371.

Research output: Contribution to journalArticle

Motor Neurons
Peripheral Nerves
Electrodes
Neural Prostheses
Amputees
5 Citations (Scopus)

Antimicrobial Distribution From Local Delivery Depends on Dose: A Pilot Study With MRI

McLaren, A., Giers, M. B., Fraser, J., Hosack, L., Caplan, M. & McLemore, R., Oct 2 2014, In : Clinical Orthopaedics and Related Research. 472, 11, p. 3324-3329 6 p.

Research output: Contribution to journalArticle

Gadolinium
Pentetic Acid
Bone Cements
Tissue Distribution
Rabbits
68 Citations (Scopus)

Biodegradable nanofibrous polymeric substrates for generating elastic and flexible electronics

Najafabadi, A. H., Tamayol, A., Annabi, N., Ochoa, M., Mostafalu, P., Akbari, M., Nikkhah, M., Rahimi, R., Dokmeci, M. R., Sonkusale, S., Ziaie, B. & Khademhosseini, A., Sep 3 2014, In : Advanced Materials. 26, 33, p. 5823-5830 8 p.

Research output: Contribution to journalArticle

Flexible electronics
Substrates
Sensors
Electronic equipment
Gases
9 Citations (Scopus)

Characterization of right wrist posture during simulated colonoscopy: An application of kinematic analysis to the study of endoscopic maneuvers

Mohankumar, D., Garner, H., Ruff, K., Ramirez, F. C., Fleischer, D., Wu, Q. & Santello, M., Mar 2014, In : Gastrointestinal Endoscopy. 79, 3, p. 480-489 10 p.

Research output: Contribution to journalArticle

Colonoscopy
Wrist
Posture
Biomechanical Phenomena
Articular Range of Motion
8 Citations (Scopus)

Comparison among different high porosity stent configurations: Hemodynamic effects of treatment in a large cerebral aneurysm

Roszelle, B. N., Nair, P., Gonzalez, L. F., Babiker, M. H., Ryan, J. & Frakes, D., Feb 2014, In : Journal of Biomechanical Engineering. 136, 2, 021013.

Research output: Contribution to journalArticle

Stents
Porosity
Hemodynamics
Intracranial Aneurysm
Aneurysm
12 Citations (Scopus)

Coordination between digit forces and positions: Interactions between anticipatory and feedback control

Fu, Q. & Santello, M., Apr 1 2014, In : Journal of Neurophysiology. 111, 7, p. 1519-1528 10 p.

Research output: Contribution to journalArticle

Cues
Torque
Accidental Falls
Social Adjustment
Equipment and Supplies
6 Citations (Scopus)

Corticospinal excitability underlying digit force planning for grasping in humans

Parikh, P., Davare, M., McGurrin, P. & Santello, M., Jun 15 2014, In : Journal of Neurophysiology. 111, 12, p. 2560-2569 10 p.

Research output: Contribution to journalArticle

Advisory Committees
Transcranial Magnetic Stimulation
Sensory Feedback
Motor Cortex
Task Performance and Analysis
13 Citations (Scopus)

Detection of 1,5-anhydroglucitol by electrochemical impedance spectroscopy

Adamson, T. L., Cook, C. B. & LaBelle, J., 2014, In : Journal of diabetes science and technology. 8, 2, p. 350-355 6 p.

Research output: Contribution to journalArticle

Dielectric Spectroscopy
Electrochemical impedance spectroscopy
Blood
Point-of-Care Systems
Biomarkers
4 Citations (Scopus)

Development of the resolution theory for electrophoretic exclusion

Kenyon, S. M., Keebaugh, M. W. & Hayes, M., 2014, In : Electrophoresis. 35, 18, p. 2551-2559 9 p.

Research output: Contribution to journalArticle

Hydrodynamics
Electrophoretic mobility
25 Citations (Scopus)

Differentiation of Escherichia coli serotypes using DC gradient insulator dielectrophoresis

Jones, P. V., DeMichele, A. F., Kemp, L. & Hayes, M., Jan 2014, In : Analytical and Bioanalytical Chemistry. 406, 1, p. 183-192 10 p.

Research output: Contribution to journalArticle

Electrophoresis
Escherichia coli
Bacteria
Foodborne Diseases
Microchannels
7 Citations (Scopus)

Digit forces bias sensorimotor transformations underlying control of fingertip position

Shibata, D., Kappers, A. M. L. & Santello, M., Aug 4 2014, In : Frontiers in Human Neuroscience. 8, AUG, 564.

Research output: Contribution to journalArticle

Hand
Thumb
Fingers
Pressure
Sensory Feedback
6 Citations (Scopus)

Distribution of molecules locally delivered from bone cement

Giers, M. B., McLaren, A. C., Schmidt, K. J., Caplan, M. & McLemore, R., 2014, In : Journal of Biomedical Materials Research - Part B Applied Biomaterials. 102, 4, p. 806-814 9 p.

Research output: Contribution to journalArticle

Bone cement
Bone Cements
Gadolinium
Molecules
Acids

Editorial: Foreword for special issue on rehabilitation robotics and human-robot interaction - ROBOTICA

Artemiadis, P. & Santello, M., Dec 12 2014, In : Robotica. 32, 8, p. 1189-1190 2 p.

Research output: Contribution to journalArticle

Human-robot Interaction
Human robot interaction
Rehabilitation
Patient rehabilitation
Robotics
3 Citations (Scopus)

Efficiency of visual feedback integration differs between dominant and non-dominant arms during a reaching task

Apker, G. A., Dyson, K., Frantz, G. & Buneo, C., 2014, In : Experimental Brain Research. 233, 1, p. 317-327 11 p.

Research output: Contribution to journalArticle

Sensory Feedback
Noise
7 Citations (Scopus)

Emerging technologies for biomedical analysis

Woolley, C. F. & Hayes, M., May 21 2014, In : Analyst. 139, 10, p. 2277-2288 12 p.

Research output: Contribution to journalArticle

Point-of-Care Systems
Biomedical Technology
Telemedicine
Technology
Costs and Cost Analysis
31 Citations (Scopus)

Endogenous WNT signaling regulates hPSC-derived neural progenitor cell heterogeneity and specifies their regional identity

Moya, N., Cutts, J., Gaasterland, T., Willert, K. & Brafman, D., Dec 9 2014, In : Stem Cell Reports. 3, 6, p. 1015-1028 14 p.

Research output: Contribution to journalArticle

Pluripotent Stem Cells
Stem cells
Cell culture
Stem Cells
Neurons
20 Citations (Scopus)

GdDO3NI, a nitroimidazole-based T 1 MRI contrast agent for imaging tumor hypoxia in vivo Topical Issue on Metal-Based MRI Contrast Agents. Guest editor: Valerie C. Pierre

Gulaka, P. K., Rojas-Quijano, F., Kovacs, Z., Mason, R. P., Sherry, A. D. & Kodibagkar, V., Feb 2014, In : Journal of Biological Inorganic Chemistry. 19, 2, p. 271-279 9 p.

Research output: Contribution to journalArticle

Nitroimidazoles
Magnetic resonance imaging
Contrast Media
Tumors
Metals
22 Citations (Scopus)

Gene networks of fully connected triads with complete auto-activation enable multistability and stepwise stochastic transitions

Faucon, P. C., Pardee, K., Kumar, R. M., Li, H., Loh, Y. H. & Wang, X., Jul 24 2014, In : PLoS One. 9, 7, e102873.

Research output: Contribution to journalArticle

Gene Regulatory Networks
automobiles
topology
Genes
Chemical activation
5 Citations (Scopus)

Ground level environmental protein concentrations in various ecuadorian environments: Potential uses of aerosolized protein for ecological research

Staton, S. J. R., Woodward, A., Castillo, J. A., Swing, K. & Hayes, M., 2014, In : Ecological Indicators. 48, p. 389-395 7 p.

Research output: Contribution to journalArticle

bioaerosols
protein
ecosystems
ecosystem
proteins
363 Citations (Scopus)

Hydrogel bioprinted microchannel networks for vascularization of tissue engineering constructs

Bertassoni, L. E., Cecconi, M., Manoharan, V., Nikkhah, M., Hjortnaes, J., Cristino, A. L., Barabaschi, G., Demarchi, D., Dokmeci, M. R., Yang, Y. & Khademhosseini, A., Jul 7 2014, In : Lab on a Chip - Miniaturisation for Chemistry and Biology. 14, 13, p. 2202-2211 10 p.

Research output: Contribution to journalArticle

Hydrogel
Tissue Engineering
Microchannels
Tissue engineering
Hydrogels
6 Citations (Scopus)

Identifying chaotic Fitzhugh-Nagumo neurons using compressive sensing

Su, R. Q., Lai, Y-C. & Wang, X., 2014, In : Entropy. 16, 7, p. 3889-3902 14 p.

Research output: Contribution to journalArticle

neurons
dynamical systems
time series analysis
embedding
set theory
210 Citations (Scopus)

Injectable graphene oxide/hydrogel-based angiogenic gene delivery system for vasculogenesis and cardiac repair

Paul, A., Hasan, A., Kindi, H. A., Gaharwar, A. K., Rao, V. T. S., Nikkhah, M., Shin, S. R., Krafft, D., Dokmeci, M. R., Shum-Tim, D. & Khademhosseini, A., 2014, In : ACS Nano. 8, 8, p. 8050-8062 13 p.

Research output: Contribution to journalArticle

Graphite
Hydrogel
Hydrogels
genes
Oxides
8 Citations (Scopus)

Kernel sparse models for automated tumor segmentation

Thiagarajan, J. J., Ramamurthy, K. N., Rajan, D., Spanias, A., Puri, A. & Frakes, D., 2014, In : International Journal on Artificial Intelligence Tools. 23, 3, 1460004.

Research output: Contribution to journalArticle

Tumors
Magnetic resonance
Glossaries
Pixels
Brain
84 Citations (Scopus)

Layer-by-layer assembly of 3D tissue constructs with functionalized graphene

Shin, S. R., Aghaei-Ghareh-Bolagh, B., Gao, X., Nikkhah, M., Jung, S. M., Dolatshahi-Pirouz, A., Kim, S. B., Kim, S. M., Dokmeci, M. R., Tang, X. & Khademhosseini, A., Oct 22 2014, In : Advanced Functional Materials. 24, 39, p. 6136-6144 9 p.

Research output: Contribution to journalArticle

Graphite
Graphene
graphene
assembly
Tissue
9 Citations (Scopus)

Learned manipulation at unconstrained contacts does not transfer across hands

Fu, Q., Choi, J. Y., Gordon, A. M., Jesunathadas, M. & Santello, M., Sep 18 2014, In : PLoS One. 9, 9, e108222.

Research output: Contribution to journalArticle

hands
Hand
Switches
Torque
learning
11 Citations (Scopus)

Linking Genes to Neurological Clinical Practice: The Genomic Basis for Neurorehabilitation

Goldberg, A., Curtis, C. L. & Kleim, J., Nov 20 2014, (Accepted/In press) In : Journal of Neurologic Physical Therapy.

Research output: Contribution to journalArticle

Nervous System Diseases
Neuronal Plasticity
Information Science
HapMap Project
Genes
27 Citations (Scopus)

Local Gentamicin Delivery From Resorbable Viscous Hydrogels Is Therapeutically Effective

Overstreet, D., McLaren, A., Calara, F., Vernon, B. & McLemore, R., 2014, In : Clinical Orthopaedics and Related Research. 473, 1, p. 337-347 11 p.

Research output: Contribution to journalArticle

Hydrogels
Gentamicins
Hydrogel
Infection
Bone Wires
4 Citations (Scopus)

Manual coordination with intermittent targets: Velocity information for prospective control

Fine, J., Ward, K. L. & Amazeen, E., 2014, In : Acta Psychologica. 149, p. 24-31 8 p.

Research output: Contribution to journalArticle

Eye Movements
Hand
Research
Prediction
5 Citations (Scopus)

Neuronavigation using three-dimensional proton magnetic resonance spectroscopy data

Kanberoglu, B., Moore, N. Z., Frakes, D., Karam, L., Debbins, J. P. & Preul, M. C., Nov 13 2014, In : Stereotactic and Functional Neurosurgery. 92, 5, p. 306-314 9 p.

Research output: Contribution to journalArticle

Neuronavigation
Spectrum Analysis
Meningioma
Workflow
Imagery (Psychotherapy)
41 Citations (Scopus)

Quorum-sensing crosstalk-driven synthetic circuits: From Unimodality to trimodality

Wu, F., Menn, D. J. & Wang, X., Dec 18 2014, In : Chemistry and Biology. 21, 12, p. 1629-1638 10 p.

Research output: Contribution to journalArticle

Quorum Sensing
Crosstalk
Networks (circuits)
Synthetic Biology
Biotechnology
2 Citations (Scopus)

Stabilizing perceptual-motor asymmetries during social coordination

Fine, J. & Amazeen, E., 2014, In : Human Movement Science. 34, 1, p. 91-108 18 p.

Research output: Contribution to journalArticle

47 Citations (Scopus)

Structural reinforcement of cell-laden hydrogels with microfabricated three dimensional scaffolds

Cha, C., Soman, P., Zhu, W., Nikkhah, M., Camci-Unal, G., Chen, S. & Khademhosseini, A., 2014, In : Biomaterials Science. 2, 5, p. 703-709 7 p.

Research output: Contribution to journalArticle

Hydrogels
Scaffolds (biology)
Reinforcement
Scaffolds
Hydrogel
5 Citations (Scopus)

Synergistic control of hand muscles through common neural input

Santello, M., 2014, In : Springer Tracts in Advanced Robotics. 95, p. 23-48 26 p.

Research output: Contribution to journalArticle

Muscle
Neurology
Chemical activation