CLAS-NS: Biological Physics, Center for

Research Output 1870 2019

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Conference contribution
2018

A biometric usability evaluation of instrument cluster and infotainment systems in two hybrid cars

Kula, I., Atkinson, R., Roscoe, R. & Branaghan, R., Jun 26 2018, 2017 IEEE SmartWorld Ubiquitous Intelligence and Computing, Advanced and Trusted Computed, Scalable Computing and Communications, Cloud and Big Data Computing, Internet of People and Smart City Innovation, SmartWorld/SCALCOM/UIC/ATC/CBDCom/IOP/SCI 2017 - Conference Proceedings. Institute of Electrical and Electronics Engineers Inc., p. 1-6 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

infotainment
biometry
Biometrics
Automobile instruments
automobile

A multi-Dimensional analysis of writing flexibility in an automated writing evaluation system

Allen, L. K., Likens, A. D. & McNamara, D., Mar 7 2018, Proceedings of the 8th International Conference on Learning Analytics and Knowledge: Towards User-Centred Learning Analytics, LAK 2018. Association for Computing Machinery, p. 380-388 9 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Linguistics
Feedback
Students

Recurrence quantification analysis as a method for studying text comprehension dynamics

Likens, A. D., McCarthy, K. S., Allen, L. K. & McNamara, D., Mar 7 2018, Proceedings of the 8th International Conference on Learning Analytics and Knowledge: Towards User-Centred Learning Analytics, LAK 2018. Association for Computing Machinery, p. 111-120 10 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Students
Linguistics
Dynamical systems
System theory

Simultaneous retrieval of coherently illuminated defocused objects

Chen, J. P. J. & Kirian, R., Jul 3 2018, 2017 International Conference on Image and Vision Computing New Zealand, IVCNZ 2017. IEEE Computer Society, Vol. 2017-December. p. 1-5 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Wave propagation
Diffraction

Task-parallel analysis of molecular dynamics trajectories

Paraskevakos, I., Chantzialexiou, G., Luckow, A., Cheatham, T. E., Khoshlessan, M., Beckstein, O., Fox, G. C. & Jha, S., Aug 13 2018, Proceedings of the 47th International Conference on Parallel Processing, ICPP 2018. Association for Computing Machinery, a49

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Molecular dynamics
Trajectories
Electric sparks
Optimal systems
Computer simulation
2017

Confined electrochemical deposition in sub-15 nm space for preparing nanogap electrodes

Sadar, J., Wang, Y. & Qing, Q., Jan 1 2017, Solid-State Electronics and Photonics in Biology and Medicine 4. 7 ed. Electrochemical Society Inc., Vol. 77. p. 65-72 8 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Electrodes
Molecular electronics
Fluidics
Metals

Phase retrieval in the presence of multiplicative noise

Chen, J. P. J. & Kirian, R., Jan 1 2017, Unconventional and Indirect Imaging, Image Reconstruction, and Wavefront Sensing 2017. SPIE, Vol. 10410. 104100K

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Phase Retrieval
Multiplicative Noise
retrieval
Multiplicative
Diffraction
2016
1 Citation (Scopus)

Measurements of transmitted electron beam extinction through Si crystal membranes

Nanni, E. A., Li, R. K., Limborg, C., Shen, X., Weathersby, S., Graves, W., Kirian, R., Spence, J. & Weierstall, U., 2016, IPAC 2016 - Proceedings of the 7th International Particle Accelerator Conference. Joint Accelerator Conferences Website (JACoW), p. 1611-1614 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

extinction
electron beams
membranes
crystals
modulation
2015
4 Citations (Scopus)

Biphasic droplet-based sample delivery of protein crystals for serial femtosecond crystallography with an x-ray free electron laser

Echelmeier, A., Nelson, G., Abdallah, B. G., James, D., Roy-Chowdhury, S., Tolstikova, A., Mariani, V., Kirian, R., Oberthüer, D., Dörner, K., Fromme, P., Chapman, H. N., Weierstall, U., Spence, J. & Ros, A., 2015, MicroTAS 2015 - 19th International Conference on Miniaturized Systems for Chemistry and Life Sciences. Chemical and Biological Microsystems Society, p. 1374-1376 3 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Crystallography
Free electron lasers
X ray lasers
Proteins
X rays
1 Citation (Scopus)

Image reconstruction in serial femtosecond nanocrystallography using x-ray free-electron lasers

Chen, J. P. J., Kirian, R., Beyerlein, K. R., Bean, R. J., Morgan, A. J., Yefanov, O. M., Arnal, R. D., Wojtas, D. H., Bones, P. J., Chapman, H. N., Spence, J. & Millane, R. P., 2015, Proceedings of SPIE - The International Society for Optical Engineering. SPIE, Vol. 9600. 960002

Research output: Chapter in Book/Report/Conference proceedingConference contribution

X-ray Laser
Free Electron Laser
x ray lasers
Femtosecond
Free electron lasers
2 Citations (Scopus)

Toward steering a jet of particles into an X-ray beam with optically induced forces

Eckerskorn, N., Bowman, R., Kirian, R., Awel, S., Wiedorn, M., Küpper, J., Padgett, M. J., Chapman, H. N. & Rode, A. V., 2015, Proceedings of SPIE - The International Society for Optical Engineering. SPIE, Vol. 9548. 95480H

Research output: Chapter in Book/Report/Conference proceedingConference contribution

X ray lasers
X rays
Graphite
Free electron lasers
Biomolecules
2013

Catalytic deoxygenation of cyanobacteria-derived fatty acids to hydrocarbons

Schulz, T., Oelschlager, M., Nielsen, D., Vermaas, W. & Lamb, H. H., 2013, Fuels and Petrochemicals Division 2013 - Core Programming Area at the 2013 AIChE Annual Meeting: Global Challenges for Engineering a Sustainable Future. AIChE, p. 264-265 2 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Fatty acids
Hydrocarbons
Cyanobacteria
2012
7 Citations (Scopus)

Microscopic linear liquid streams in vacuum: Injection of solvated biological samples into X-ray free electron lasers

Doak, R. B., Deponte, D. P., Nelson, G., Camacho-Alanis, F., Ros, A., Spence, J. & Weierstall, U., 2012, AIP Conference Proceedings. 1 ed. Vol. 1501. p. 1314-1323 10 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

gas dynamics
free electron lasers
free flow
injection
vacuum
2 Citations (Scopus)

Phase retrieval in femtosecond X-ray nanocrystallography

Chen, J. P. J., Spence, J. & Millane, R. P., 2012, ACM International Conference Proceeding Series. p. 43-48 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Diffraction
Charge density
X rays
Crystals
X ray crystallography

Phase retrieval in nanocrystallography

Chen, J. P. J., Spence, J. & Millane, R. P., 2012, Proceedings of SPIE - The International Society for Optical Engineering. Vol. 8500. 85000I

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Phase Retrieval
retrieval
Diffraction
Crystal
diffraction
1 Citation (Scopus)

Time-resolved single molecule microscopy coupled with atomic force microscopy

König, M., Koberling, F., Schulz, O., Ros, R., Fore, S., Sackrow, M., Trautmann, S. & Erdmann, R., 2012, Progress in Biomedical Optics and Imaging - Proceedings of SPIE. Vol. 8227. 822719

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Confocal microscopy
Atomic Force Microscopy
Confocal Microscopy
Atomic force microscopy
Microscopic examination
2011
1 Citation (Scopus)

Inactivation of encephalomyocarditis virus and salmonella typhimurium by using a visible femtosecond laser

Tsen, S. W. D. & Tsen, K-T., 2011, Progress in Biomedical Optics and Imaging - Proceedings of SPIE. Vol. 7895. 78950S

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Encephalomyocarditis virus
salmonella
Salmonella
ultrashort pulsed lasers
viruses
2010

Dynamics of LO phonons in InN studied by subpicosecond time-resolved Raman spectroscopy

Tsen, K-T., 2010, Materials Research Society Symposium Proceedings. Vol. 1221. p. 7-20 14 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Phonons
Raman spectroscopy
phonons
life (durability)
Carrier concentration
2 Citations (Scopus)

Photonic approach to the selective inactivation of viruses with a near-infrared ultrashort pulsed laser

Tsen, K-T., Tsen, S. W. D., Fu, Q., Lindsay, S., Kibler, K., Jacobs, B., Wu, T. C., Li, Z., Yan, H., Cope, S., Vaiana, S. & Kiang, J. G., 2010, Progress in Biomedical Optics and Imaging - Proceedings of SPIE. Vol. 7561. 75610W

Research output: Chapter in Book/Report/Conference proceedingConference contribution

ultrashort pulsed lasers
Optics and Photonics
Virus Inactivation
viruses
Pulsed lasers
3 Citations (Scopus)

Reconstruction of the electron density of molecules with single-axis alignment

Starodub, D., Spence, J. & Saldin, D. K., 2010, Proceedings of SPIE - The International Society for Optical Engineering. Vol. 7800. 78000O

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Carrier concentration
Diffraction
Alignment
alignment
Molecules
10 Citations (Scopus)

Simultaneous single molecule atomic force and fluorescence lifetime imaging

Schulz, O., Koberling, F., Walters, D., Koenig, M., Viani, J. & Ros, R., 2010, Progress in Biomedical Optics and Imaging - Proceedings of SPIE. Vol. 7571. 757109

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Atomic Force Microscopy
Optical Imaging
Atomic force microscopy
Fluorescence
Imaging techniques
2003
4 Citations (Scopus)

X-ray microscopy by phase-retrieval methods at the advanced light source

Howells, M. R., Chapman, H., Hau-Riege, S., He, H., Marchesini, S., Spence, J. & Weierstall, U., Mar 2003, Journal De Physique. IV : JP. Susini, J., Joyeux, D. & Polack, F. (eds.). Vol. 104. p. 557-561 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

retrieval
light sources
histories
microscopy
requirements
1993

Low-voltage scanning electron microscopy of urinary stones

Rez, P., 1993, Proceedings - Annual Meeting, Microscopy Society of America. Publ by San Francisco Press Inc, p. 416-417 2 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Insulating materials
Field emission
Electron microscopes
Scanning
Imaging techniques
1985

ELECTRONIC STRUCTURE OF PARTIAL DISLOCATIONS IN SILICON.

Spence, J. & Chelikowsky, J. R., 1985, Unknown Host Publication Title. Warrendale, PA, USA: Metallurgical Soc of AIME, p. 451 1 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Metal insulator transition
Dislocations (crystals)
Band structure
Electronic structure
Paramagnetic resonance