Research Output

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Review article
2018

Genetic diversity on the sex chromosomes

Wilson Sayres, M., Apr 1 2018, In : Genome Biology and Evolution. 10, 4, p. 1064-1078 15 p.

Research output: Contribution to journalReview article

12 Scopus citations

Launching the C-HPP neXt-CP50 Pilot Project for Functional Characterization of Identified Proteins with No Known Function

Paik, Y. K., Lane, L., Kawamura, T., Chen, Y. J., Cho, J. Y., LaBaer, J., Yoo, J. S., Domont, G., Corrales, F., Omenn, G. S., Archakov, A., Encarnación-Guevara, S., Lui, S., Salekdeh, G. H., Cho, J. Y., Kim, C. Y. & Overall, C. M., Dec 7 2018, In : Journal of Proteome Research. 17, 12, p. 4042-4050 9 p.

Research output: Contribution to journalReview article

15 Scopus citations

Life History Trade-Offs in Tumors

Boddy, A. M., Huang, W. & Aktipis, C. A., Dec 1 2018, In : Current Pathobiology Reports. 6, 4, p. 201-207 7 p.

Research output: Contribution to journalReview article

Open Access
2 Scopus citations

Lost in the crowd: identifying targetable MHC class I neoepitopes for cancer immunotherapy

Wilson, E. A. & Anderson, K., Dec 2 2018, In : Expert Review of Proteomics. 15, 12, p. 1065-1077 13 p.

Research output: Contribution to journalReview article

6 Scopus citations

Managing Diffuse Phosphorus at the Source versus at the Sink

MacIntosh, K. A., Mayer, B. K., McDowell, R. W., Powers, S. M., Baker, L. A., Boyer, T. & Rittmann, B., Nov 6 2018, In : Environmental Science and Technology. 52, 21, p. 11995-12009 15 p.

Research output: Contribution to journalReview article

19 Scopus citations

Metal-chelating non-canonical amino acids in metalloprotein engineering and design

Almhjell, P. J. & Mills, J., Aug 1 2018, In : Current Opinion in Structural Biology. 51, p. 170-176 7 p.

Research output: Contribution to journalReview article

5 Scopus citations

Modeling Host-Pathogen Interactions in the Context of the Microenvironment: Three-Dimensional Cell Culture Comes of Age

Barrila, J., Crabbé, A., Yang, J., Franco, K., Nydam, S. D., Forsyth, R. J., Davis, R. R., Gangaraju, S., Ott, C. M., Coyne, C. B., Bissell, M. J. & Nickerson, C., Nov 1 2018, In : Infection and Immunity. 86, 11

Research output: Contribution to journalReview article

20 Scopus citations

Nanoporous materials in polymeric membranes for desalination

Cay-Durgun, P. & Thomas, M., Jun 2018, In : Current Opinion in Chemical Engineering. 20, p. 19-27 9 p.

Research output: Contribution to journalReview article

9 Scopus citations

Notes on recombination and reassortment in multipartite/segmented viruses

Varsani, A., Lefeuvre, P., Roumagnac, P. & Martin, D., Dec 2018, In : Current opinion in virology. 33, p. 156-166 11 p.

Research output: Contribution to journalReview article

10 Scopus citations

Recent developments in bifunctional air electrodes for unitized regenerative proton exchange membrane fuel cells – A review

Hunsom, M., Kaewsai, D. & Mada Kannan, A., Nov 15 2018, In : International Journal of Hydrogen Energy. p. 21478-21501 24 p.

Research output: Contribution to journalReview article

10 Scopus citations

Ribocomputing: Cellular Logic Computation Using RNA Devices

Kim, J., Yin, P. & Green, A., Feb 13 2018, In : Biochemistry. 57, 6, p. 883-885 3 p.

Research output: Contribution to journalReview article

5 Scopus citations

Role of extracellular vesicles in viral and bacterial infections: Pathogenesis, diagnostics, and therapeutics

Rodrigues, M., Fan, J., Lyon, C., Wan, M. & Hu, Y., Jan 1 2018, In : Theranostics. 8, 10, p. 2709-2721 13 p.

Research output: Contribution to journalReview article

26 Scopus citations

The role of citizen science in addressing grand challenges in food and agriculture research

Ryan, S. F., Adamson, N. L., Aktipis, C. A., Andersen, L. K., Austin, R., Barnes, L., Beasley, M. R., Bedell, K. D., Briggs, S., Chapman, B., Cooper, C. B., Corn, J. O., Creamer, N. G., Delborne, J. A., Domenico, P., Driscoll, E., Goodwin, J., Hjarding, A., Hulbert, J. M., Isard, S. & 22 others, Just, M. G., Kar Gupta, K., López-Uribe, M. M., O’Sullivan, J., Landis, E. A., Madden, A. A., McKenney, E. A., Nichols, L. M., Reading, B. J., Russell, S., Sengupta, N., Shapiro, L. R., Shell, L. K., Sheard, J. K., Shoemaker, D. D., Sorger, D. M., Starling, C., Thakur, S., Vatsavai, R. R., Weinstein, M., Winfrey, P. & Dunn, R. R., Nov 21 2018, In : Proceedings of the Royal Society B: Biological Sciences. 285, 1891, 20181977.

Research output: Contribution to journalReview article

Open Access
16 Scopus citations

Understanding cooperation through fitness interdependence

Aktipis, C. A., Cronk, L., Alcock, J., Ayers, J. D., Baciu, C., Balliet, D., Boddy, A. M., Curry, O. S., Krems, J. A., Muñoz, A., Sullivan, D., Sznycer, D., Wilkinson, G. S. & Winfrey, P., Jul 1 2018, In : Nature Human Behaviour. 2, 7, p. 429-431 3 p.

Research output: Contribution to journalReview article

13 Scopus citations

Virotherapy as Potential Adjunct Therapy for Graft-Vs-Host Disease

Villa, N. & McFadden, D., Dec 1 2018, In : Current Pathobiology Reports. 6, 4, p. 247-263 17 p.

Research output: Contribution to journalReview article

Open Access

Viruses associated with Antarctic wildlife: From serology based detection to identification of genomes using high throughput sequencing

Smeele, Z. E., Ainley, D. G. & Varsani, A., Jan 2 2018, In : Virus research. 243, p. 91-105 15 p.

Research output: Contribution to journalReview article

11 Scopus citations
2017

Anorexia: A perverse effect of attempting to control the starvation response

Nesse, R., Jan 1 2017, In : Behavioral and Brain Sciences. 40, p. 31-32 2 p., e125.

Research output: Contribution to journalReview article

1 Scopus citations

A peptide adhesive molded by magnesium glues Rubisco's subunits together

Wachter, R., Apr 21 2017, In : Journal of Biological Chemistry. 292, 16, p. 6851-6852 2 p.

Research output: Contribution to journalReview article

Can Li-Ion batteries be the panacea for automotive applications?

Opitz, A., Badami, P., Shen, L., Vignarooban, K. & Mada Kannan, A., Feb 1 2017, In : Renewable and Sustainable Energy Reviews. 68, p. 685-692 8 p.

Research output: Contribution to journalReview article

73 Scopus citations

Classifying the evolutionary and ecological features of neoplasms

Maley, C., Aktipis, C. A., Graham, T. A., Sottoriva, A., Boddy, A. M., Janiszewska, M., Silva, A. S., Gerlinger, M., Yuan, Y., Pienta, K. J., Anderson, K., Gatenby, R., Swanton, C., Posada, D., Wu, C. I., Schiffman, J. D., Hwang, E. S., Polyak, K., Anderson, A. R. A., Brown, J. S. & 2 others, Greaves, M. & Shibata, D., Oct 1 2017, In : Nature Reviews Cancer. 17, 10, p. 605-619 15 p.

Research output: Contribution to journalReview article

101 Scopus citations
5 Scopus citations

Current and emerging techniques for antibiotic susceptibility tests

Syal, K., Mo, M., Yu, H., Iriya, R., Jing, W., Guodong, S., Wang, S., Grys, T. E., Haydel, S. & Tao, N., 2017, In : Theranostics. 7, 7, p. 1795-1805 11 p.

Research output: Contribution to journalReview article

48 Scopus citations

Engineering nucleic acid structures for programmable molecular circuitry and intracellular biocomputation

Li, J., Green, A., Yan, H. & Fan, C., Sep 25 2017, In : Nature Chemistry. 9, 11, p. 1056-1067 12 p.

Research output: Contribution to journalReview article

91 Scopus citations

Evolutionary public health: introducing the concept

Wells, J. C. K., Nesse, R., Sear, R., Johnstone, R. A. & Stearns, S. C., Jul 29 2017, In : The Lancet. 390, 10093, p. 500-509 10 p.

Research output: Contribution to journalReview article

52 Scopus citations

Feature selection: A data perspective

Li, J., Cheng, K., Wang, S., Morstatter, F., Trevino, R. P., Tang, J. & Liu, H., Dec 2017, In : ACM Computing Surveys. 50, 6, 94.

Research output: Contribution to journalReview article

296 Scopus citations

Going outdoors: A natural antidote for attention fatigue?

Merritt, E., Oct 1 2017, In : Phi Delta Kappan. 99, 2, p. 21-25 5 p.

Research output: Contribution to journalReview article

Ironies in microbial electrochemistry

Rittmann, B., May 1 2017, In : Journal of Environmental Engineering (United States). 143, 5, 03117001.

Research output: Contribution to journalReview article

2 Scopus citations

Plasmonic imaging of electrochemical impedance

Yuan, L., Tao, N. & Wang, W., Jun 12 2017, In : Annual Review of Analytical Chemistry. 10, p. 183-200 18 p.

Research output: Contribution to journalReview article

15 Scopus citations

Semaphorins 4A and 4D in chronic inflammatory diseases

Chapoval, S. P., Vadasz, Z., Chapoval, A. & Toubi, E., Feb 1 2017, In : Inflammation Research. 66, 2, p. 111-117 7 p.

Research output: Contribution to journalReview article

12 Scopus citations

Short-wavelength free-electron laser sources and science: A review

Seddon, E. A., Clarke, J. A., Dunning, D. J., Masciovecchio, C., Milne, C. J., Parmigiani, F., Rugg, D., Spence, J., Thompson, N. R., Ueda, K., Vinko, S. M., Wark, J. S. & Wurth, W., Oct 23 2017, In : Reports on Progress in Physics. 80, 11, 115901.

Research output: Contribution to journalReview article

48 Scopus citations

Speech understanding in complex listening environments by listeners fit with cochlear implants

Dorman, M. & Gifford, R. H., Oct 1 2017, In : Journal of Speech, Language, and Hearing Research. 60, 10, p. 3019-3026 8 p.

Research output: Contribution to journalReview article

7 Scopus citations

Structure determination based on continuous diffraction from macromolecular crystals

Chapman, H. N. & Fromme, P., Aug 2017, In : Current Opinion in Structural Biology. 45, p. 170-177 8 p.

Research output: Contribution to journalReview article

1 Scopus citations

Targeting tumor necrosis factor alpha for Alzheimer’s disease

DeCourt, B., Lahiri, D. K. & Sabbagh, M. N., Apr 1 2017, In : Current Alzheimer research. 14, 4, p. 412-425 14 p.

Research output: Contribution to journalReview article

59 Scopus citations

The nexus of dietary guidelines and food security

McFadden, B. & Schmitz, T., 2017, In : Frontiers of Economics and Globalization. 17, p. 19-34 16 p.

Research output: Contribution to journalReview article

2016

Addressing ecological effects of radiation on populations and ecosystems to improve protection of the environment against radiation: Agreed statements from a Consensus Symposium

Bréchignac, F., Oughton, D., Mays, C., Barnthouse, L., Beasley, J. C., Bonisoli-Alquati, A., Bradshaw, C., Brown, J., Dray, S., Geras'kin, S., Glenn, T., Higley, K., Ishida, K., Kapustka, L., Kautsky, U., Kuhne, W., Lynch, M., Mappes, T., Mihok, S., Møller, A. P. & 8 others, Mothersill, C., Mousseau, T. A., Otaki, J., Pryakhin, E., Rhodes, O. E., Salbu, B., Strand, P. & Tsukada, H., Jul 1 2016, In : Journal of Environmental Radioactivity. 158-159, p. 21-29 9 p.

Research output: Contribution to journalReview article

38 Scopus citations

Advancing translational research with next-generation protein microarrays

Yu, X., Petritis, B. & LaBaer, J., Apr 1 2016, In : Proteomics. 16, 8, p. 1238-1250 13 p.

Research output: Contribution to journalReview article

10 Scopus citations

A synthesis of the economic values of wilderness

Holmes, T. P., Bowker, J. M., Englin, J., Hjerpe, E., Loomis, J. B., Phillips, S. & Richardson, R., May 1 2016, In : Journal of Forestry. 114, 3, p. 320-328 9 p.

Research output: Contribution to journalReview article

11 Scopus citations

Critical review of factors governing data quality of integrative samplers employed in environmental water monitoring

Roll, I. B. & Halden, R., May 1 2016, In : Water Research. 94, p. 200-207 8 p.

Research output: Contribution to journalReview article

27 Scopus citations

Critical Uncertainties and Gaps in the Environmental-and Social-Impact Assessment of the Proposed Interoceanic Canal through Nicaragua

Huete-Perez, J. A., Ortega-Hegg, M., Urquhart, G. R., Covich, A. P., Vammen, K., Rittmann, B., Miranda, J. C., Espinoza-Corriols, S., Acevedo, A., Acosta, M. L., Gómez, J. P., Brett, M. T., Hanemann, W., Härer, A., Incer-Barquero, J., Joyce, F. J., Wesley Lauer, J., Maes, J. M., Tomson, M. B., Meyer, A. & 4 others, Montenegro-Guillen, S., Lindsay Whitlow, W., Schnoor, J. L. & Alvarez, P. J. J., Aug 1 2016, In : BioScience. 66, 8, p. 632-645 14 p.

Research output: Contribution to journalReview article

4 Scopus citations

Crucial considerations for pipelines to validate circulating biomarkers for breast cancer

Ewaisha, R., Gawryletz, C. D. & Anderson, K., Feb 1 2016, In : Expert Review of Proteomics. 13, 2, p. 201-211 11 p.

Research output: Contribution to journalReview article

3 Scopus citations

Evolutionary Ecology of Organs: A Missing Link in Cancer Development?

Thomas, F., Nesse, R., Gatenby, R., Gidoin, C., Renaud, F., Roche, B. & Ujvari, B., Aug 1 2016, In : Trends in Cancer. 2, 8, p. 409-415 7 p.

Research output: Contribution to journalReview article

15 Scopus citations

Evolutionary perspectives of telomerase RNA structure and function

Podlevsky, J. D. & Chen, J., Aug 2 2016, In : RNA Biology. 13, 8, p. 720-732 13 p.

Research output: Contribution to journalReview article

32 Scopus citations

Gene expression elucidates functional impact of polygenic risk for schizophrenia

Fromer, M., Roussos, P., Sieberts, S. K., Johnson, J. S., Kavanagh, D. H., Perumal, T. M., Ruderfer, D. M., Oh, E. C., Topol, A., Shah, H. R., Klei, L. L., Kramer, R., Pinto, D., Gümüş, Z. H., Cicek, A. E., Dang, K. K., Browne, A., Lu, C., Xie, L., Readhead, B. & 38 others, Stahl, E. A., Xiao, J., Parvizi, M., Hamamsy, T., Fullard, J. F., Wang, Y. C., Mahajan, M. C., Derry, J. M. J., Dudley, J. T., Hemby, S. E., Logsdon, B. A., Talbot, K., Raj, T., Bennett, D. A., De Jager, P. L., Zhu, J., Zhang, B., Sullivan, P. F., Chess, A., Purcell, S. M., Shinobu, L. A., Mangravite, L. M., Toyoshiba, H., Gur, R. E., Hahn, C. G., Lewis, D. A., Haroutunian, V., Peters, M. A., Lipska, B. K., Buxbaum, J. D., Schadt, E. E., Hirai, K., Roeder, K., Brennand, K. J., Katsanis, N., Domenici, E., Devlin, B. & Sklar, P., Oct 26 2016, In : Nature Neuroscience. 19, 11, p. 1442-1453 12 p.

Research output: Contribution to journalReview article

300 Scopus citations

Genomic signatures of sex-biased demography: progress and prospects

Webster, T. H. & Wilson Sayres, M., Dec 1 2016, In : Current Opinion in Genetics and Development. 41, p. 62-71 10 p.

Research output: Contribution to journalReview article

14 Scopus citations

Many Planets, Not Much Life

Davies, P. & Bower, T., Aug 16 2016, In : Scientific American. 315, 3, p. 8 1 p.

Research output: Contribution to journalReview article

1 Scopus citations

Mass spectrometric immunoassays for discovery, screening and quantification of clinically relevant proteoforms

Trenchevska, O., Nelson, R. W. & Nedelkov, D., Aug 1 2016, In : Bioanalysis. 8, 15, p. 1623-1633 11 p.

Research output: Contribution to journalReview article

8 Scopus citations

Meta-analysis of ionic liquid literature and toxicology

Heckenbach, M. E., Romero, F. N., Green, M. & Halden, R., May 1 2016, In : Chemosphere. 150, p. 266-274 9 p.

Research output: Contribution to journalReview article

40 Scopus citations

Online Behavioral Analysis and Modeling [Guest Editorial]

Cui, P., Liu, H., Aggarwal, C. & Wang, F., Jan 1 2016, In : IEEE Intelligent Systems. 31, 1, p. 2-4 3 p., 7389910.

Research output: Contribution to journalReview article

3 Scopus citations

Organic Contaminants in Chinese Sewage Sludge: A Meta-Analysis of the Literature of the Past 30 Years

Meng, X. Z., Venkatesan, A. K., Ni, Y. L., Steele, J. C., Wu, L. L., Bignert, A., Bergman, Å. & Halden, R., Jun 7 2016, In : Environmental Science and Technology. 50, 11, p. 5454-5466 13 p.

Research output: Contribution to journalReview article

53 Scopus citations

Person-Centered Multimedia Computing: A New Paradigm Inspired by Assistive and Rehabilitative Applications

Panchanathan, S., Chakraborty, S., McDaniel, T. & Tadayon, R., Jul 1 2016, In : IEEE Multimedia. 23, 3, p. 12-19 8 p., 7535120.

Research output: Contribution to journalReview article

3 Scopus citations