BI: Innovations in Medicine, Center for (IM)

Research Output

2020

Antibody characterization using immunosignatures

Stafford, P., Johnston, S. A., Kantarci, O. H., Zare-Shahabadi, A., Warrington, A. & Rodriguez, M., 2020, In : PloS one. 15, 3, e0229080.

Research output: Contribution to journalArticle

Open Access
Open Access

Comparison of personal and shared frameshift neoantigen vaccines in a mouse mammary cancer model

Peterson, M., Murphy, S. N., Lainson, J., Zhang, J., Shen, L., Diehnelt, C. W. & Johnston, S. A., May 5 2020, In : BMC Immunology. 21, 1, 25.

Research output: Contribution to journalArticle

Open Access

Implications of new understandings of gliomas in children and adults with NF1: Report of a consensus conference

Packer, R. J., Iavarone, A., Jones, D. T. W., Blakeley, J. O., Bouffet, E., Fisher, M. J., Hwang, E., Hawkins, C., Kilburn, L., MacDonald, T., Pfister, S. M., Rood, B., Rodriguez, F. J., Tabori, U., Ramaswamy, V., Zhu, Y., Fangusaro, J., Johnston, S. A. & Gutmann, D. H., Jun 9 2020, In : Neuro-Oncology. 22, 6, p. 773-784 12 p.

Research output: Contribution to journalArticle

Open Access
4 Scopus citations
2019

A novel photocatalytic optical hollow-fiber with high photocatalytic activity for enhancement of 4-chlorophenol degradation

Zhong, N., Chen, M., Luo, Y., Wang, Z., Xin, X. & Rittmann, B., Jan 1 2019, In : Chemical Engineering Journal. 355, p. 731-739 9 p.

Research output: Contribution to journalArticle

25 Scopus citations
Open Access
Open Access
1 Scopus citations
7 Scopus citations

Bioavailable electron donors leached from leaves accelerate biodegradation of pyridine and quinoline

Lu, Q., Zhang, C., Wang, W., Yuan, B., Zhang, Y. & Rittmann, B., Mar 1 2019, In : Science of the Total Environment. 654, p. 473-479 7 p.

Research output: Contribution to journalArticle

4 Scopus citations

Cities of the Southwest are testbeds for urban resilience

Hondula, D., Sabo, J., Quay, R., Chester, M., Georgescu, M., Grimm, N., Harlan, S., Middel, A., Porter, S., Redman, C., Rittmann, B., Ruddell, B. L. & White, D., Mar 1 2019, In : Frontiers in Ecology and the Environment. 17, 2, p. 79-80 2 p.

Research output: Contribution to journalArticle

1 Scopus citations

Directed Energy Transfer through DNAlated J-Aggregates

Mandal, S., Zhou, X., Lin, S., Yan, H. & Woodbury, N., Apr 15 2019, In : Bioconjugate chemistry. 30, 7, p. 1870-1879 10 p.

Research output: Contribution to journalArticle

1 Scopus citations

Effects of light intensity on soluble microbial products produced by Synechocystis sp. PCC 6803 and associated heterotrophic communities

Cahill, B., Straka, L., Maldonado Ortiz, J., Krajmalnik-Brown, R. & Rittmann, B., Mar 1 2019, In : Algal Research. 38, 101409.

Research output: Contribution to journalArticle

Efficient Long-Range, Directional Energy Transfer through DNAlated Dye Aggregates

Zhou, X., Mandal, S., Jiang, S., Lin, S., Yang, J., Liu, Y., Whitten, D. G., Woodbury, N. W. & Yan, H., May 29 2019, In : Journal of the American Chemical Society. 141, 21, p. 8473-8481 9 p.

Research output: Contribution to journalArticle

4 Scopus citations

Electron-acceptor loadings affect chloroform dechlorination in a hydrogen-based membrane biofilm reactor

Lai, Y. J. S., Ontiveros-Valencia, A., Coskun, T., Zhou, C. & Rittmann, B., Jun 2019, In : Biotechnology and bioengineering. 116, 6, p. 1439-1448 10 p.

Research output: Contribution to journalArticle

3 Scopus citations

Energy recovery in the form of N 2 O by denitrifying bacteria

Yu, C., Qiao, S., Yang, Y., Jin, R., Zhou, J. & Rittmann, B., Sep 1 2019, In : Chemical Engineering Journal. 371, p. 500-506 7 p.

Research output: Contribution to journalArticle

6 Scopus citations

Evaluation of Virex® II 256 and Virex® Tb as Disinfectants of the Dimorphic Fungi Coccidioides immitis and Coccidioides posadasii

Mitchell, N. M., Magee, D., Grys, T. E. & Lake, D., Mar 1 2019, In : Applied Biosafety. 24, 1, p. 30-33 4 p.

Research output: Contribution to journalArticle

4 Scopus citations

Growth kinetics and mathematical modeling of Synechocystis sp. PCC 6803 under flashing light

Straka, L. & Rittmann, B., Feb 1 2019, In : Biotechnology and bioengineering. 116, 2, p. 469-474 6 p.

Research output: Contribution to journalArticle

2 Scopus citations

High-resolution cryo-EM structures of outbreak strain human norovirus shells reveal size variations

Jung, J., Grant, T., Thomas, D. R., Diehnelt, C. W., Grigorieff, N. & Joshua-Tor, L., 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 26, p. 12828-12832 5 p.

Research output: Contribution to journalArticle

Open Access
8 Scopus citations

High-Throughput Profiling of Circulating Antibody Signatures for Stroke Diagnosis Using Small Volumes of Whole Blood

O’Connell, G. C., Stafford, P., Walsh, K. B., Adeoye, O. & Barr, T. L., Jul 15 2019, In : Neurotherapeutics. 16, 3, p. 868-877 10 p.

Research output: Contribution to journalArticle

Immune Checkpoints of the B7 Family. Part 1. General Characteristics and First Representatives: B7-1, B7-2, B7-H1, B7-H2, and B7-DC

Chapoval, A. I., Chapoval, S. P., Shcherbakova, N. S. & Shcherbakov, D. N., Jul 1 2019, In : Russian Journal of Bioorganic Chemistry. 45, 4, p. 225-240 16 p.

Research output: Contribution to journalReview article

Immune Checkpoints of the B7 Family. Part 2. Representatives of the B7 Family B7-H3, B7-H4, B7-H5, B7-H6, B7-H7, and ILDR2 and Their Receptors

Chapoval, A. I., Chapoval, S. P., Shcherbakova, N. S. & Shcherbakov, D. N., Sep 1 2019, In : Russian Journal of Bioorganic Chemistry. 45, 5, p. 321-334 14 p.

Research output: Contribution to journalReview article

Immunosignature Analysis of Myalgic Encephalomyelitis/Chronic Fatigue Syndrome (ME/CFS)

Günther, O. P., Gardy, J. L., Stafford, P., Fluge, Ø., Mella, O., Tang, P., Miller, R. R., Parker, S. M., Johnston, S. & Patrick, D. M., Jun 1 2019, In : Molecular Neurobiology. 56, 6, p. 4249-4257 9 p.

Research output: Contribution to journalArticle

3 Scopus citations

Loss of SETD2 Induces a Metabolic Switch in Renal Cell Carcinoma Cell Lines toward Enhanced Oxidative Phosphorylation

Liu, J., Hanavan, P. D., Kras, K., Ruiz, Y. W., Castle, E. P., Lake, D., Chen, X., O'Brien, D., Luo, H., Robertson, K. D., Gu, H. & Ho, T. H., Jan 4 2019, In : Journal of Proteome Research. 18, 1, p. 331-340 10 p.

Research output: Contribution to journalArticle

5 Scopus citations

Methane oxidation coupled to perchlorate reduction in a membrane biofilm batch reactor

Lv, P. L., Shi, L. D., Wang, Z., Rittmann, B. & Zhao, H. P., Jun 1 2019, In : Science of the Total Environment. 667, p. 9-15 7 p.

Research output: Contribution to journalArticle

19 Scopus citations

Phosphate depletion controls lipid content and accumulation of heterotrophic bacteria during growth of Synechocystis sp. PCC 6803

Zhou, Y., Lai, Y. J. S., Eustance, E., Xia, S. & Rittmann, B., Jan 1 2019, In : Applied Microbiology and Biotechnology.

Research output: Contribution to journalArticle

2 Scopus citations

RNA Transcription and Splicing Errors as a Source of Cancer Frameshift Neoantigens for Vaccines

Shen, L., Zhang, J., Lee, H., Batista, M. T. & Johnston, S. A., Dec 1 2019, In : Scientific reports. 9, 1, 14184.

Research output: Contribution to journalArticle

Open Access
6 Scopus citations

Role of hydrogen (H 2 ) mass transfer in microbiological H 2 -threshold studies

Karadagli, F., Marcus, A. & Rittmann, B., Jan 1 2019, In : Biodegradation.

Research output: Contribution to journalArticle

3 Scopus citations

Serving Individuals and Populations Within Integrated Health Systems: A Bridge Too Far?

Moses, H., Matheson, D. H. M. & Poste, G., Jan 1 2019, In : JAMA - Journal of the American Medical Association.

Research output: Contribution to journalComment/debate

The role of ultrasound-treated sludge for accelerating quinoline mono-oxygenation

Zhang, Y., Wang, Y., Lu, Q., Zhang, C., Yan, N., Zhang, Y. & Rittmann, B., Mar 1 2019, In : Journal of Environmental Management. 233, p. 561-566 6 p.

Research output: Contribution to journalArticle

2 Scopus citations

Uptake of phosphate by Synechocystis sp. PCC 6803 in dark conditions: Removal driving force and modeling

Zhou, Y., Marcus, A., Straka, L., Eustance, E., Lai, Y. J. S., Xia, S. & Rittmann, B., Mar 2019, In : Chemosphere. 218, p. 147-156 10 p.

Research output: Contribution to journalArticle

2 Scopus citations
2018

Accurate O2 delivery enabled benzene biodegradation through aerobic activation followed by denitrification-coupled mineralization

Liu, Z., Zhou, C., Ontiveros-Valencia, A., Luo, Y. H., Long, M., Xu, H. & Rittmann, B., Jan 1 2018, (Accepted/In press) In : Biotechnology and Bioengineering.

Research output: Contribution to journalArticle

7 Scopus citations

Adaptive global innovative learning environment for glioblastoma: GBM AGILE

GBM AGILE Network, Feb 15 2018, In : Clinical Cancer Research. 24, 4, p. 737-743 7 p.

Research output: Contribution to journalReview article

35 Scopus citations

A framework for good biofilm reactor modeling practice (GBRMP)

Rittmann, B., Boltz, J. P., Brockmann, D., Daigger, G. T., Morgenroth, E., Sørensen, K. H., Takács, I., Van Loosdrecht, M. & Vanrolleghem, P. A., Mar 2018, In : Water Science and Technology. 77, 5, p. 1149-1164 16 p.

Research output: Contribution to journalArticle

11 Scopus citations

Biofilms, active substrata, and me

Rittmann, B., Apr 1 2018, In : Water Research. 132, p. 135-145 11 p.

Research output: Contribution to journalReview article

49 Scopus citations

Bioreduction of Antimonate by Anaerobic Methane Oxidation in a Membrane Biofilm Batch Reactor

Lai, C. Y., Dong, Q. Y., Rittmann, B. & Zhao, H. P., Aug 7 2018, In : Environmental Science and Technology. 52, 15, p. 8693-8700 8 p.

Research output: Contribution to journalArticle

14 Scopus citations

Biotechnological revalorization of Tequila waste and by-product streams for cleaner production – A review from bio-refinery perspective

Alemán-Nava, G. S., Gatti, I. A., Parra-Saldivar, R., Dallemand, J. F., Rittmann, B. & Iqbal, H. M. N., Jan 20 2018, In : Journal of Cleaner Production. 172, p. 3713-3720 8 p.

Research output: Contribution to journalArticle

18 Scopus citations

Bromate and Nitrate Bioreduction Coupled with Poly-β-hydroxybutyrate Production in a Methane-Based Membrane Biofilm Reactor

Lai, C. Y., Lv, P. L., Dong, Q. Y., Yeo, S. L., Rittmann, B. & Zhao, H. P., Jun 19 2018, In : Environmental Science and Technology. 52, 12, p. 7024-7031 8 p.

Research output: Contribution to journalArticle

17 Scopus citations

Cell disruption by cationic surfactants affects bioproduct recovery from Synechocystis sp. PCC 6803

Lai, Y. J. S., Zhou, Y., Eustance, E., Straka, L., Wang, Z. & Rittmann, B., Sep 1 2018, In : Algal Research. 34, p. 250-255 6 p.

Research output: Contribution to journalArticle

3 Scopus citations

Characterization and high-throughput sequencing of a trichlorophenol-dechlorinating microbial community acclimated from sewage sludge

Song, J., Chen, L., Chen, H., Sheng, F., Xing, D., Li, L., Zhang, Y. & Rittmann, B., Oct 1 2018, In : Journal of Cleaner Production. 197, p. 306-313 8 p.

Research output: Contribution to journalArticle

7 Scopus citations

Climate Change and Energy Technologies in Undergraduate Introductory Science Textbooks

Yoho, R. A. & Rittmann, B., Aug 18 2018, In : Environmental Communication. 12, 6, p. 731-743 13 p.

Research output: Contribution to journalArticle

2 Scopus citations

Competition for electrons between mono-oxygenations of pyridine and 2-hydroxypyridine

Yang, C., Tang, Y., Xu, H., Yan, N., Li, N., Zhang, Y. & Rittmann, B., May 21 2018, (Accepted/In press) In : Biodegradation. p. 1-9 9 p.

Research output: Contribution to journalArticle

Competition for molecular oxygen and electron donor between phenol and quinoline during their simultaneous biodegradation

Zou, S., Zhang, B., Yan, N., Zhang, C., Xu, H., Zhang, Y. & Rittmann, B., Jul 2018, In : Process Biochemistry. 70, p. 136-143 8 p.

Research output: Contribution to journalArticle

6 Scopus citations

Complete dechlorination and mineralization of pentachlorophenol (PCP) in a hydrogen-based membrane biofilm reactor (MBfR)

Long, M., Ilhan, Z. E., Xia, S., Zhou, C. & Rittmann, B., Nov 1 2018, In : Water Research. 144, p. 134-144 11 p.

Research output: Contribution to journalArticle

22 Scopus citations

Converging and emerging threats to health security

Raina Macintyre, C., Engells, T. E., Scotch, M., Heslop, D. J., Gumel, A., Poste, G., Chen, X., Herche, W., Steinhöfel, K., Lim, S. & Broom, A., Jun 1 2018, In : Environment Systems and Decisions. 38, 2, p. 198-207 10 p.

Research output: Contribution to journalReview article

12 Scopus citations

Correction: Expression of quiescin sulfhydryl oxidase 1 is associated with a highly invasive phenotype and correlates with a poor prognosis in luminal B breast cancer. [Breast Cancer Res., 15, 2, (2013) (R28)] DOI: 10.1186/bcr3407

Katchman, B. A., Tolgay Ocal, I., Cunliffe, H. E., Chang, Y. H., Hostetter, G., Watanabe, A., LoBello, J. & Lake, D., Aug 8 2018, In : Breast Cancer Research. 20, 1, 89.

Research output: Contribution to journalComment/debate

Determining the mechanism for low sludge yields in the cannibal solids reduction system

Van Ginkel, S. W., Miceli, J., Kim, B. O., Yang, Z., Young, M., Marcus, A. & Rittmann, B., Jan 1 2018, In : Water Environment Research. 90, 1, p. 42-47 6 p.

Research output: Contribution to journalArticle

4 Scopus citations

Development of Search Strategy for Peptide Inhibitors of Immune Checkpoints

Podlesnykh, S. V., Shanshin, D. V., Kolosova, E. A., Murashkin, D. E., Shaprova, O. N., Shcherbakov, D. N. & Chapoval, A., Mar 1 2018, In : Russian Journal of Bioorganic Chemistry. 44, 2, p. 150-157 8 p.

Research output: Contribution to journalArticle

1 Scopus citations

Direct solid-state evidence of H2-induced partial U(VI) reduction concomitant with adsorption by extracellular polymeric substances (EPS)

Li, A., Zhou, C., Liu, Z., Xu, X., Zhou, Y., Zhou, D., Tang, Y., Ma, F. & Rittmann, B., Jan 1 2018, (Accepted/In press) In : Biotechnology and Bioengineering.

Research output: Contribution to journalArticle

17 Scopus citations